RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 UQCC1Q9NVA1 299 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 FBXL17Q9UF56 701 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 IGHV3OR16-13A0A075B7E8 117 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 IGHV3-74A0A0B4J1X5 117 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 OR11H12B2RN74 326 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 CST7O76096 145 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 NHLRC4P0CG21 123 aaPredicted RBP8.46□□□□□ -1.06
SF3B6-201ENST00000233468 FGL1Q08830 312 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 OR2F1Q13607 317 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 C1orf194Q5T5A4 169 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 PXDC1Q5TGL8 231 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 CYP2G1PQ6ZSU1 146 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 ZNF546Q86UE3 836 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 Q8N1Y9 231 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 THAP6Q8TBB0 222 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 ZNF414Q96IQ9 312 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 FAM110AQ9BQ89 295 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 TMEM147Q9BVK8 224 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 C11orf1Q9H5F2 150 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 U3KQE9 123 aa8.46□□□□□ -1.06
SF3B6-201ENST00000233468 STAB2Q8WWQ8 2551 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 IGKV1OR2-108A0A075B7D4 117 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 IGHV3-66A0A0C4DH42 116 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 DFFBO76075 338 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 MPC2O95563 127 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 APOHP02749 345 aaPredicted RBP8.45□□□□□ -1.06
SF3B6-201ENST00000233468 IGHV4-30-4P0DP06 118 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 RAP2BP61225 183 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 USF2Q15853 346 aaPredicted RBP8.45□□□□□ -1.06
SF3B6-201ENST00000233468 SAMD13Q5VXD3 122 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 FAM90A2PQ658T7 463 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 C16orf54Q6UWD8 224 aa8.45□□□□□ -1.06
SF3B6-201ENST00000233468 BUB3O43684 328 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 MPDU1O75352 247 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 HYPMO75409 117 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 CCNKO75909 580 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 CD7P09564 240 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 ORM2P19652 201 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 EWSR1Q01844 656 aaKnown RBP eCLIP8.44□□□□□ -1.06
SF3B6-201ENST00000233468 ARL16Q0P5N6 197 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 SIGLEC15Q6ZMC9 328 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 Q6ZRG5 221 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 STPG3Q8N7X2 389 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 OR1B1Q8NGR6 318 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 GPR82Q96P67 336 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 MS4A6AQ9H2W1 248 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 OR5AC2Q9NZP5 309 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 SELENOKQ9Y6D0 94 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 TENM2Q9NT68 2774 aa8.44□□□□□ -1.06
SF3B6-201ENST00000233468 IGKV3-7A0A075B6H7 116 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 IGSF23A1L1A6 192 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 AGPAT2O15120 278 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 GIPP09681 153 aaPredicted RBP8.43□□□□□ -1.06
SF3B6-201ENST00000233468 FRMD6-AS1P0C7T7 363 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 LINC00869P0C866 280 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 GALR1P47211 349 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 TFPI2P48307 235 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 CAMLGP49069 296 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 PLP1P60201 277 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 FCN2Q15485 313 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 VWC2Q2TAL6 325 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 XP32Q5T750 250 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 OR8I2Q8N0Y5 310 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 GBGT1Q8N5D6 347 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 STXBP6Q8NFX7 210 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 ZMAT4Q9H898 229 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 SEPSECSQ9HD40 501 aaKnown RBP8.43□□□□□ -1.06
SF3B6-201ENST00000233468 KCNIP2Q9NS61 270 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 C19orf73Q9NVV2 129 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 HIGD1AQ9Y241 93 aa8.43□□□□□ -1.06
SF3B6-201ENST00000233468 H0YIZ8 118 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 OR5G3P0C626 314 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 CXCL3P19876 107 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 RPL12P30050 165 aaKnown RBP8.42□□□□□ -1.06
SF3B6-201ENST00000233468 SNRPD3P62318 126 aaKnown RBP8.42□□□□□ -1.06
SF3B6-201ENST00000233468 WFDC3Q8IUB2 231 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 DEFB125Q8N687 156 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 ZNF709Q8N972 641 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 OR5C1Q8NGR4 320 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 OR1L4Q8NGR5 311 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 CHAC2Q8WUX2 184 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 GLMPQ8WWB7 406 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 ASCL2Q99929 193 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 RNF126Q9BV68 326 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 SRD5A3Q9H8P0 318 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 NRN1Q9NPD7 142 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 MBD2Q9UBB5 411 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 WDR83OSQ9Y284 106 aa8.42□□□□□ -1.06
SF3B6-201ENST00000233468 SORL1Q92673 2214 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 UBE2L5PA0A1B0GUS4 154 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 ZNF98A6NK75 572 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 C17orf112F2Z3M2 114 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 COX7A2P2O60397 106 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
SF3B6-201ENST00000233468 IFNA5P01569 189 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 FGF7P21781 194 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 GATA2P23769 480 aaPredicted RBP8.41□□□□□ -1.06
SF3B6-201ENST00000233468 ID1P41134 155 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 MEOX2P50222 304 aa8.41□□□□□ -1.06
SF3B6-201ENST00000233468 NHLH2Q02577 135 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms