RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 FCER1GP30273 86 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 PAXXQ9BUH6 204 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 CACNA1HO95180 2353 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 A8MWL6 223 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 MGST3O14880 152 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 KLF5Q13887 457 aaPredicted RBP11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 TDHQ8IZJ6 230 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 RBMXL3Q8N7X1 1067 aaKnown RBP11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 NPIPB3Q92617 1050 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 SRSF8Q9BRL6 282 aaKnown RBP11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 MGAQ8IWI9 3026 aa11.46□□□□□ -0.57
PCDHB3-201ENST00000231130 ATMQ13315 3056 aa11.46□□□□□ -0.57
PCDHB3-201ENST00000231130 APOHP02749 345 aaPredicted RBP11.46□□□□□ -0.57
PCDHB3-201ENST00000231130 ARPC1AQ92747 370 aa11.46□□□□□ -0.57
PCDHB3-201ENST00000231130 SPENQ96T58 3664 aaKnown RBP11.46□□□□□ -0.57
PCDHB3-201ENST00000231130 ADGRG4Q8IZF6 3080 aa11.46□□□□□ -0.58
PCDHB3-201ENST00000231130 NCR2O95944 276 aa11.46□□□□□ -0.58
PCDHB3-201ENST00000231130 MOSP00540 346 aa11.46□□□□□ -0.58
PCDHB3-201ENST00000231130 FAM120AOSQ5T036 256 aa11.46□□□□□ -0.58
PCDHB3-201ENST00000231130 GCSAMQ8N6F7 178 aa11.46□□□□□ -0.58
PCDHB3-201ENST00000231130 KBTBD11-OT1A0A1B0GTJ5 212 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 VWC2LB2RUY7 222 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 SCGB1A1P11684 91 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 TIMM23BQ5SRD1 257 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 TMEM164Q5U3C3 297 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 CCL13Q99616 98 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 TMEM14BQ9NUH8 114 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 AP5S1Q9NUS5 200 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 MED13LQ71F56 2210 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 PGPA6NDG6 321 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 C21orf140B9A014 251 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 AMTNQ6UX39 209 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 IGF2BP2-AS1Q96M15 143 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 NHP2Q9NX24 153 aaKnown RBP11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 SLC25A10Q9UBX3 287 aaPredicted RBP11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 SMPXQ9UHP9 88 aa11.45□□□□□ -0.58
PCDHB3-201ENST00000231130 E7EUB6 86 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 PEX7O00628 323 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 CSN1S1P47710 185 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 PEAR1Q5VY43 1037 aaPredicted RBP11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 C10orf113Q5VZT2 155 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 INO80CQ6PI98 192 aaPredicted RBP11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 ITLN1Q8WWA0 313 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 CHCHD1Q96BP2 118 aaKnown RBP11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 TRGV8A0A0C4DH27 118 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 SP9P0CG40 484 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 SAA1P0DJI8 122 aaPredicted RBP11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 FAM90A1Q86YD7 464 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 PCP2Q8IVA1 136 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 PRR7Q8TB68 274 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 FAM222BQ8WU58 562 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 SLC25A2Q9BXI2 301 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 PTPRBP23467 1997 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 MSMPQ1L6U9 139 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 FAM216BQ8N7L0 139 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 FLYWCH2Q96CP2 140 aaKnown RBP11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 MRAP2Q96G30 205 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 C1RLQ9NZP8 487 aa11.44□□□□□ -0.58
PCDHB3-201ENST00000231130 TRAV8-1A0A0A6YYK1 113 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 H3BMG7 143 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 M0R1B8 84 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 P01737 135 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 CACNG7P62955 275 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 PRB3Q04118 309 aaPredicted RBP11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 HCP5Q6MZN7 132 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 HARBI1Q96MB7 349 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 FOXA2Q9Y261 457 aaPredicted RBP11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 CRXO43186 299 aaPredicted RBP11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 LAMTOR5O43504 91 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 CCL11P51671 97 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 BCL6BQ8N143 479 aaPredicted RBP11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 PRNDQ9UKY0 176 aa11.43□□□□□ -0.58
PCDHB3-201ENST00000231130 LINC00305Q7Z4B0 112 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 LINC00322Q6ZN03 302 aaPredicted RBP11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 Q6ZT83 130 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 ZADH2Q8N4Q0 377 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 DDB2Q92466 427 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 PIEZO2Q9H5I5 2752 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 IGHV3-72A0A0B4J1Y9 119 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 A0A1W2PNU3 283 aaPredicted RBP11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 SLC25A17O43808 307 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 OR2J3O76001 311 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 C17orf58Q2M2W7 97 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 SPAG8Q99932 426 aaPredicted RBP11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 TTTY13Q9BZ97 58 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 RALYQ9UKM9 306 aaKnown RBP11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 NBASA2RRP1 2371 aa11.42□□□□□ -0.58
PCDHB3-201ENST00000231130 A0A1B0GWB2 263 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 A0A1W2PRD5 423 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 A0A1W2PRF3 423 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 A0A1W2PRM7 423 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 FAM90A9PA6NNJ1 464 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 SRRM5B3KS81 715 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 INSL3P51460 131 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 ERHP84090 104 aaKnown RBP11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 PRCDQ00LT1 54 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 CD69Q07108 199 aa11.41□□□□□ -0.58
PCDHB3-201ENST00000231130 RASL11AQ6T310 242 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms