RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MDS2Q8NDY4 140 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 MAP1LC3AQ9H492 121 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 COL4A4P53420 1690 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-201ENST00000226574 FAM181BA6NEQ2 426 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 RIPPLY3P57055 190 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 LINC00527Q9UJ94 153 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 BMI1P35226 326 aa11.21□□□□□ -0.61
NFKB1-201ENST00000226574 FAM168AQ92567 244 aa11.21□□□□□ -0.61
NFKB1-201ENST00000226574 MEGF9Q9H1U4 602 aa11.21□□□□□ -0.61
NFKB1-201ENST00000226574 WISP2O76076 250 aa11.21□□□□□ -0.61
NFKB1-201ENST00000226574 TMEM200BQ69YZ2 307 aa11.21□□□□□ -0.61
NFKB1-201ENST00000226574 CRIP3Q6Q6R5 217 aa11.21□□□□□ -0.61
NFKB1-201ENST00000226574 RNASEH2CQ8TDP1 164 aaKnown RBP11.21□□□□□ -0.61
NFKB1-201ENST00000226574 C9JCJ5 164 aa11.21□□□□□ -0.62
NFKB1-201ENST00000226574 TM4SF5O14894 197 aa11.21□□□□□ -0.62
NFKB1-201ENST00000226574 TGFAP01135 160 aa11.21□□□□□ -0.62
NFKB1-201ENST00000226574 TYMSP04818 313 aa11.21□□□□□ -0.62
NFKB1-201ENST00000226574 TSPOP30536 169 aa11.21□□□□□ -0.62
NFKB1-201ENST00000226574 ERVK11-1P61568 191 aa11.21□□□□□ -0.62
NFKB1-201ENST00000226574 LYPD2Q6UXB3 125 aa11.21□□□□□ -0.62
NFKB1-201ENST00000226574 TECTAO75443 2155 aa11.21□□□□□ -0.62
NFKB1-201ENST00000226574 CIDEAO60543 219 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 LY6EQ16553 131 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 OR10J3Q5JRS4 329 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
NFKB1-201ENST00000226574 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
NFKB1-201ENST00000226574 Q8TAT8 98 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 FOXC2Q99958 501 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 TRIOO75962 3097 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 PF4V1P10720 104 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 ZNF474Q6S9Z5 364 aaPredicted RBP11.2□□□□□ -0.62
NFKB1-201ENST00000226574 PSG8Q9UQ74 426 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 SLC25A15Q9Y619 301 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
NFKB1-201ENST00000226574 TMEM265A0A087WTH1 108 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
NFKB1-201ENST00000226574 NUP210Q8TEM1 1887 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-201ENST00000226574 ZNF106Q9H2Y7 1883 aaKnown RBP11.19□□□□□ -0.62
NFKB1-201ENST00000226574 DKK1O94907 266 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 WNT2P09544 360 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 COL8A2P25067 703 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 DIAPH2-AS1Q14236 149 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 NEUROG1Q92886 237 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 LOXL4Q96JB6 756 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 OBSL1O75147 1896 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 SRRM4A7MD48 611 aaKnown RBP11.19□□□□□ -0.62
NFKB1-201ENST00000226574 SMKR1H3BMG3 65 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 TIMM23O14925 209 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 VDAC2P45880 294 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-201ENST00000226574 ATP5IP56385 69 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-201ENST00000226574 K7EN84 100 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 DPM3Q9P2X0 92 aa11.19□□□□□ -0.62
NFKB1-201ENST00000226574 ORMDL3Q8N138 153 aa11.18□□□□□ -0.62
NFKB1-201ENST00000226574 STPG4Q8N801 248 aa11.18□□□□□ -0.62
NFKB1-201ENST00000226574 PLSCR4Q9NRQ2 329 aa11.18□□□□□ -0.62
NFKB1-201ENST00000226574 IGKV2-40A0A087WW87 121 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-201ENST00000226574 IGKV2D-40P01614 121 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-201ENST00000226574 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
NFKB1-201ENST00000226574 RNF125Q96EQ8 232 aa11.18□□□□□ -0.62
NFKB1-201ENST00000226574 PRSS2P07478 247 aa11.18□□□□□ -0.62
NFKB1-201ENST00000226574 RPL15P61313 204 aaKnown RBP11.18□□□□□ -0.62
NFKB1-201ENST00000226574 IGFBPL1Q8WX77 278 aa11.18□□□□□ -0.62
NFKB1-201ENST00000226574 TMEM133Q9H2Q1 129 aa11.18□□□□□ -0.62
NFKB1-201ENST00000226574 NHP2Q9NX24 153 aaKnown RBP11.18□□□□□ -0.62
NFKB1-201ENST00000226574 TCRAP04437 139 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 SPRNQ5BIV9 151 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 OR1N2Q8NGR9 330 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 FMC1Q96HJ9 113 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 PHLDA3Q9Y5J5 127 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 SPCS1Q9Y6A9 102 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 V9GYV3 84 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 LOC105371242A0A075B767 164 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.17□□□□□ -0.62
NFKB1-201ENST00000226574 CCDC144NLQ6NUI1 221 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 NDUFA3O95167 84 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 LMO1P25800 156 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 CNTFRP26992 372 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 FER1L6-AS1Q8NA97 138 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 RNASE6Q93091 150 aaKnown RBP11.17□□□□□ -0.62
NFKB1-201ENST00000226574 ZNF257Q9Y2Q1 563 aa11.17□□□□□ -0.62
NFKB1-201ENST00000226574 ZNF883P0CG24 379 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 MEF2CQ06413 473 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-201ENST00000226574 ODF3L1Q8IXM7 274 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 D6R8Y8 96 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 H0YJW9 148 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 IGLC2P0DOY2 106 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 IGLC3P0DOY3 106 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 GAFA1Q96PS6 74 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 USP9XQ93008 2570 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-201ENST00000226574 KLRD1Q13241 179 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 CLEC19AQ6UXS0 136 aa11.16□□□□□ -0.62
NFKB1-201ENST00000226574 A0A1W2PPI3 338 aa11.15□□□□□ -0.62
NFKB1-201ENST00000226574 IGHV3-11P01762 117 aa11.15□□□□□ -0.62
NFKB1-201ENST00000226574 IGLL1P15814 213 aa11.15□□□□□ -0.62
NFKB1-201ENST00000226574 ADAMTS9Q9P2N4 1935 aa11.15□□□□□ -0.62
NFKB1-201ENST00000226574 KIAA1549LQ6ZVL6 1849 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms