RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OR1B1Q8NGR6 318 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 PPP1R14BQ96C90 147 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 FAM110AQ9BQ89 295 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 SPATA25Q9BR10 227 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 GGTLC1Q9BX51 225 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 NMES1Q9C002 83 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 DOK5Q9P104 306 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 ALG5Q9Y673 324 aa9.39□□□□□ -0.91
LSM5-201ENST00000223084 HELTA6NFD8 242 aa9.38□□□□□ -0.91
LSM5-201ENST00000223084 FNDC10F2Z333 226 aa9.38□□□□□ -0.91
LSM5-201ENST00000223084 DEDDO75618 318 aa9.38□□□□□ -0.91
LSM5-201ENST00000223084 ZNF688P0C7X2 276 aa9.38□□□□□ -0.91
LSM5-201ENST00000223084 SIGLEC15Q6ZMC9 328 aa9.38□□□□□ -0.91
LSM5-201ENST00000223084 TMEM252Q8N6L7 170 aa9.38□□□□□ -0.91
LSM5-201ENST00000223084 DCANP1Q8TF63 244 aa9.38□□□□□ -0.91
LSM5-201ENST00000223084 NPVFQ9HCQ7 196 aa9.38□□□□□ -0.91
LSM5-201ENST00000223084 LYRM2Q9NU23 88 aaPredicted RBP9.38□□□□□ -0.91
LSM5-201ENST00000223084 OR5AC2Q9NZP5 309 aa9.38□□□□□ -0.91
LSM5-201ENST00000223084 KMT2CQ8NEZ4 4911 aaKnown RBP9.37□□□□□ -0.91
LSM5-201ENST00000223084 H0YIZ8 118 aa9.37□□□□□ -0.91
LSM5-201ENST00000223084 CFDP00746 253 aaPredicted RBP9.37□□□□□ -0.91
LSM5-201ENST00000223084 LINC00869P0C866 280 aa9.37□□□□□ -0.91
LSM5-201ENST00000223084 SULT1A1P50225 295 aa9.37□□□□□ -0.91
LSM5-201ENST00000223084 CMC4P56277 68 aaPredicted RBP9.37□□□□□ -0.91
LSM5-201ENST00000223084 OXA1LQ15070 435 aa9.37□□□□□ -0.91
LSM5-201ENST00000223084 LINC01559Q495D7 138 aa9.37□□□□□ -0.91
LSM5-201ENST00000223084 TEPPQ6URK8 271 aa9.37□□□□□ -0.91
LSM5-201ENST00000223084 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
LSM5-201ENST00000223084 GGACTQ9BVM4 153 aa9.37□□□□□ -0.91
LSM5-201ENST00000223084 AGPAT2O15120 278 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 RLN2P04090 185 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 NUP62P37198 522 aaPredicted RBP9.36□□□□□ -0.91
LSM5-201ENST00000223084 AP2S1P53680 142 aaPredicted RBP9.36□□□□□ -0.91
LSM5-201ENST00000223084 C1orf194Q5T5A4 169 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 OR8I2Q8N0Y5 310 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 PPP1R1CQ8WVI7 109 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 MGST2Q99735 147 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 TMEM147Q9BVK8 224 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 SLC25A22Q9H936 323 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 NRN1Q9NPD7 142 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 PFDN2Q9UHV9 154 aa9.36□□□□□ -0.91
LSM5-201ENST00000223084 ZNF98A6NK75 572 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 OR5G3P0C626 314 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 SELENOTP62341 195 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 CYCSP99999 105 aaKnown RBP9.35□□□□□ -0.91
LSM5-201ENST00000223084 NHLH2Q02577 135 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 PSMG4Q5JS54 123 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 PATE2Q6UY27 113 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 STX12Q86Y82 276 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 SCRT1Q9BWW7 348 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 SLC25A32Q9H2D1 315 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 UQCC1Q9NVA1 299 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 SLC45A2Q9UMX9 530 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 HIGD1AQ9Y241 93 aa9.35□□□□□ -0.91
LSM5-201ENST00000223084 UBE2L5PA0A1B0GUS4 154 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 E5RGE8 158 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 H3BRN7 92 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 HYPMO75409 117 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 MPC2O95563 127 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 CXCL3P19876 107 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 S100A11P31949 105 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 APOC4P55056 127 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 PLP1P60201 277 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 HBG1P69891 147 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 HBG2P69892 147 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 VWC2Q2TAL6 325 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 UHRF2Q96PU4 802 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 RNF126Q9BV68 326 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
LSM5-201ENST00000223084 ARL6Q9H0F7 186 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 FBXL17Q9UF56 701 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 WDR83OSQ9Y284 106 aa9.34□□□□□ -0.91
LSM5-201ENST00000223084 RYR3Q15413 4870 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 CAMLGP49069 296 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 DEFB1P60022 68 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 RAP2BP61225 183 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 EWSR1Q01844 656 aaKnown RBP eCLIP9.33□□□□□ -0.92
LSM5-201ENST00000223084 BAXQ07812 192 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 FCN2Q15485 313 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 DEFB135Q30KP9 77 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 ACTL10Q5JWF8 245 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 MIC13Q5XKP0 118 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 ZNF546Q86UE3 836 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 OVOL2Q9BRP0 275 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 SHANK2-AS3Q9BTD1 123 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 RSG1Q9BU20 258 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 SLC25A31Q9H0C2 315 aa9.33□□□□□ -0.92
LSM5-201ENST00000223084 KIR2DL5BA0A0G2JN68 375 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 KIR2DL5BA0A0G2JPC4 375 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 SOCS3O14543 225 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 FGF7P21781 194 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 GALR1P47211 349 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 SNRPD3P62318 126 aaKnown RBP9.32□□□□□ -0.92
LSM5-201ENST00000223084 ATP6V1FQ16864 119 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 STHQ8IWL8 128 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 KIR2DL5AQ8N109 375 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 OR11H7Q8NGC8 314 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms