RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.61
USH1C-201ENST00000005226 LEPROTL1O95214 131 aa11.21□□□□□ -0.61
USH1C-201ENST00000005226 TCRAP04437 139 aa11.21□□□□□ -0.61
USH1C-201ENST00000005226 FTH1P19P0C7X4 201 aa11.21□□□□□ -0.61
USH1C-201ENST00000005226 PRNTQ86SH4 94 aa11.21□□□□□ -0.61
USH1C-201ENST00000005226 CHRDL1Q9BU40 450 aa11.21□□□□□ -0.61
USH1C-201ENST00000005226 PRSS22Q9GZN4 317 aa11.21□□□□□ -0.61
USH1C-201ENST00000005226 C19orf71A6NCJ1 209 aa11.21□□□□□ -0.62
USH1C-201ENST00000005226 LYZP61626 148 aa11.21□□□□□ -0.62
USH1C-201ENST00000005226 ADIPOQQ15848 244 aa11.21□□□□□ -0.62
USH1C-201ENST00000005226 C1orf185Q5T7R7 199 aa11.21□□□□□ -0.62
USH1C-201ENST00000005226 VSTM2AQ8TAG5 236 aa11.21□□□□□ -0.62
USH1C-201ENST00000005226 IGFBPL1Q8WX77 278 aa11.21□□□□□ -0.62
USH1C-201ENST00000005226 LOXL4Q96JB6 756 aa11.21□□□□□ -0.62
USH1C-201ENST00000005226 SPTBN2O15020 2390 aa11.21□□□□□ -0.62
USH1C-201ENST00000005226 PPIAL4EA0A075B759 164 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 C17orf100A8MU93 164 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 PPIAL4DF5H284 164 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 SNAI2O43623 268 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 NUDT3O95989 172 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 PPIAL4FP0DN26 164 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 GP9P14770 177 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 GOLT1AQ6ZVE7 132 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 ZGRF1Q86YA3 2104 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 C17orf77Q96MU5 243 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 OTOGLQ3ZCN5 2332 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 IGHV1-69-2A0A0G2JMI3 117 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 TOMM40O96008 361 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 VAMP3Q15836 100 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 VMA21Q3ZAQ7 101 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 ATP5L2Q7Z4Y8 100 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
USH1C-201ENST00000005226 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 CHEK1O14757 476 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 NDUFB3O43676 98 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 LTAP01374 205 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 CEACAM8P31997 349 aaPredicted RBP11.19□□□□□ -0.62
USH1C-201ENST00000005226 MEF2CQ06413 473 aaPredicted RBP11.19□□□□□ -0.62
USH1C-201ENST00000005226 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 CBY3A6NI87 242 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 TNFRSF1AP19438 455 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 COL8A1P27658 744 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 PRSS33Q8NF86 280 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 TMEM186Q96B77 213 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 TPPP3Q9BW30 176 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 MALRD1Q5VYJ5 2156 aa11.19□□□□□ -0.62
USH1C-201ENST00000005226 ZNF785A8K8V0 405 aa11.18□□□□□ -0.62
USH1C-201ENST00000005226 TMEM178BH3BS89 294 aa11.18□□□□□ -0.62
USH1C-201ENST00000005226 CRYGCP07315 174 aa11.18□□□□□ -0.62
USH1C-201ENST00000005226 TCTAP57738 103 aa11.18□□□□□ -0.62
USH1C-201ENST00000005226 RBX1P62877 108 aa11.18□□□□□ -0.62
USH1C-201ENST00000005226 BSPH1Q075Z2 132 aa11.18□□□□□ -0.62
USH1C-201ENST00000005226 RBPMS2Q6ZRY4 209 aaKnown RBP11.18□□□□□ -0.62
USH1C-201ENST00000005226 ANKRD11Q6UB99 2663 aaPredicted RBP11.18□□□□□ -0.62
USH1C-201ENST00000005226 LOC102724200A0A096LPH7 203 aaPredicted RBP11.18□□□□□ -0.62
USH1C-201ENST00000005226 PSG1P11464 419 aa11.18□□□□□ -0.62
USH1C-201ENST00000005226 LOXP28300 417 aaPredicted RBP11.18□□□□□ -0.62
USH1C-201ENST00000005226 RPL27AP46776 148 aaKnown RBP11.18□□□□□ -0.62
USH1C-201ENST00000005226 RNF151Q2KHN1 245 aa11.18□□□□□ -0.62
USH1C-201ENST00000005226 OR4A5Q8NH83 315 aa11.18□□□□□ -0.62
USH1C-201ENST00000005226 LRBAP50851 2863 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 MUC21A0A140T8X8 626 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 A0A1W2PRD5 423 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 A0A1W2PRF3 423 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 A0A1W2PRM7 423 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 KLK10O43240 276 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 TMEM30BQ3MIR4 351 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 MUC21Q5SSG8 566 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 FMC1Q96HJ9 113 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 S4R3C0 116 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 A0A087X0K7 114 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 RBP4P02753 201 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 OR4C5Q8NGB2 326 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 SRSF12Q8WXF0 261 aaKnown RBP11.17□□□□□ -0.62
USH1C-201ENST00000005226 TRGV9Q99603 122 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 APC2O95996 2303 aa11.17□□□□□ -0.62
USH1C-201ENST00000005226 OR2T8A6NH00 312 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 ARMS2P0C7Q2 107 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 LRRC10Q5BKY1 277 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 TMEM108Q6UXF1 575 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 Q86TA4 180 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 TEX45Q8NA69 505 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 C8orf46Q8TAG6 207 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 SELENOKQ9Y6D0 94 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 ACACAQ13085 2346 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 LYNX1G3V0Z9 82 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 IGLV2-11P01706 119 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 LYNX1P0DP58 116 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 FBXL15Q9H469 300 aa11.16□□□□□ -0.62
USH1C-201ENST00000005226 TAX1BP3O14907 124 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 FAM106CPP0CH98 169 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 HTR1DP28221 377 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 DLX6P56179 175 aa11.15□□□□□ -0.62
USH1C-201ENST00000005226 FAM106AQ4KMX7 169 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms