RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 SLC25A5P05141 298 aaKnown RBP8.5□□□□□ -1.05
USP28-201ENST00000003302 LBHQ53QV2 105 aaPredicted RBP8.5□□□□□ -1.05
USP28-201ENST00000003302 ZADH2Q8N4Q0 377 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 ZFYVE26Q68DK2 2539 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 CEACAM8P31997 349 aaPredicted RBP8.5□□□□□ -1.05
USP28-201ENST00000003302 PRRX1P54821 245 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 LOXL1Q08397 574 aaPredicted RBP8.5□□□□□ -1.05
USP28-201ENST00000003302 TEX45Q8NA69 505 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 FAM181BA6NEQ2 426 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 E7EQL1 145 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 TCF21O43680 179 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 TMEM177Q53S58 311 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.5□□□□□ -1.05
USP28-201ENST00000003302 MLST8Q9BVC4 326 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 GOLT1BQ9Y3E0 138 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 ITGB1BP1O14713 200 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 TNFRSF13BO14836 293 aaPredicted RBP8.5□□□□□ -1.05
USP28-201ENST00000003302 CCL25O15444 150 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 SIAH2O43255 324 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 GP9P14770 177 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 OR4F17Q8NGA8 305 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 OR4C13Q8NGP0 309 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 LOXL4Q96JB6 756 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 RNF2Q99496 336 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 ZNF586Q9NXT0 402 aa8.5□□□□□ -1.05
USP28-201ENST00000003302 DOPEY2Q9Y3R5 2298 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 IGHV3-23P01764 117 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 LY96Q9Y6Y9 160 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 SORL1Q92673 2214 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 MT-CO2P00403 227 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 PSG1P11464 419 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 TMEM167AQ8TBQ9 72 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 PPIAL4EA0A075B759 164 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 PPIAL4DF5H284 164 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 PPIAL4FP0DN26 164 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 CA7P43166 264 aa8.49□□□□□ -1.05
USP28-201ENST00000003302 OSR1Q8TAX0 266 aaPredicted RBP8.49□□□□□ -1.05
USP28-201ENST00000003302 A0A1B0GXF2 115 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 NBEAP1P0C6P0 100 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 TXN2Q99757 166 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 IGHV1-8P0DP01 117 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 CRIP1P50238 77 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 ERHP84090 104 aaKnown RBP8.48□□□□□ -1.05
USP28-201ENST00000003302 FAM169BQ8N8A8 192 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 NBPF19A0A087WUL8 3843 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 TEX22C9J3V5 150 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 M0R2Z0 102 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 GAS8-AS1O95177 125 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 NCR2O95944 276 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 KLRD1Q13241 179 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 LINC01560Q8TB33 94 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 RNASE8Q8TDE3 154 aaKnown RBP8.48□□□□□ -1.05
USP28-201ENST00000003302 ZNF331Q9NQX6 463 aaPredicted RBP8.48□□□□□ -1.05
USP28-201ENST00000003302 ZNF835Q9Y2P0 537 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 IGHV1-24A0A0C4DH33 117 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 TSPOP30536 169 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 Q9H3A6 140 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 ABCA2Q9BZC7 2435 aa8.48□□□□□ -1.05
USP28-201ENST00000003302 SHISA9B4DS77 424 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 HSBP1O75506 76 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 APOA2P02652 100 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 LYZP61626 148 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 OR10J3Q5JRS4 329 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 GOLT1AQ6ZVE7 132 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 RNASE6Q93091 150 aaKnown RBP8.47□□□□□ -1.05
USP28-201ENST00000003302 ADTRPQ96IZ2 230 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 LAMTOR2Q9Y2Q5 125 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 TMSB15BA0A087X1C1 80 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 USP9XQ93008 2570 aaPredicted RBP8.47□□□□□ -1.05
USP28-201ENST00000003302 IGKV1-17P01599 117 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 HLA-DQA1P01909 254 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
USP28-201ENST00000003302 TAS2R45P59539 299 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 ARMS2P0C7Q2 107 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 PRNTQ86SH4 94 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 TPPP3Q9BW30 176 aa8.47□□□□□ -1.05
USP28-201ENST00000003302 PDPNQ86YL7 162 aa8.46□□□□□ -1.05
USP28-201ENST00000003302 PIP4P2Q8N4L2 257 aa8.46□□□□□ -1.05
USP28-201ENST00000003302 C16orf97H3BN30 126 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 HLA-DMBP28068 263 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 TMEM155Q4W5P6 130 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 TMEM108Q6UXF1 575 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 TMEM75Q8N9X5 138 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 HILPDAQ9Y5L2 63 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 MZT1Q08AG7 82 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 FAM57AQ8TBR7 257 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 C8orf49Q96NF6 230 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 SIGLEC9Q9Y336 463 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 CREBBPQ92793 2442 aa8.46□□□□□ -1.06
USP28-201ENST00000003302 C19orf71A6NCJ1 209 aa8.45□□□□□ -1.06
USP28-201ENST00000003302 FNDC10F2Z333 226 aa8.45□□□□□ -1.06
USP28-201ENST00000003302 APOHP02749 345 aaPredicted RBP8.45□□□□□ -1.06
USP28-201ENST00000003302 TCRAP04437 139 aa8.45□□□□□ -1.06
USP28-201ENST00000003302 Q6ZQT7 251 aa8.45□□□□□ -1.06
USP28-201ENST00000003302 PRSS22Q9GZN4 317 aa8.45□□□□□ -1.06
USP28-201ENST00000003302 GAL3ST2Q9H3Q3 398 aa8.45□□□□□ -1.06
USP28-201ENST00000003302 WASHC3Q9Y3C0 194 aa8.45□□□□□ -1.06
USP28-201ENST00000003302 IGHV2-26A0A0B4J1V2 119 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms