RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 LAMTOR1Q6IAA8 161 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 TOMM20LQ6UXN7 152 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 TMEM182Q6ZP80 229 aaPredicted RBP9.43□□□□□ -0.9
LINC00339-213ENST00000642137 REC114Q7Z4M0 266 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 C1QL4Q86Z23 238 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 BPIFCQ8NFQ6 507 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 OR51G1Q8NGK1 321 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 DLX4Q92988 240 aaPredicted RBP9.43□□□□□ -0.9
LINC00339-213ENST00000642137 NPCDR1Q9BY65 106 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 PUS1Q9Y606 427 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINC00339-213ENST00000642137 IGHV3-35A0A0C4DH35 117 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 K7EMT4 169 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 BCL2L11O43521 198 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 PF4P02776 101 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 C4BPBP20851 252 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 ELLP55199 621 aaPredicted RBP9.42□□□□□ -0.9
LINC00339-213ENST00000642137 PLP1P60201 277 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 C9orf62Q8N4C0 152 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 ZNF709Q8N972 641 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 GGTLC1Q9BX51 225 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
LINC00339-213ENST00000642137 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 YIF1AO95070 293 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 LINC00869P0C866 280 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 GATA2P23769 480 aaPredicted RBP9.41□□□□□ -0.9
LINC00339-213ENST00000642137 SYNJ2BPP57105 145 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 EIF5AP63241 154 aaKnown RBP9.41□□□□□ -0.9
LINC00339-213ENST00000642137 PRR20EP86478 221 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 PRR20CP86479 221 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 PRR20DP86480 221 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 PRR20BP86481 221 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 PRR20AP86496 221 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 PXDC1Q5TGL8 231 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 UNQ9165/PRO28630Q6UXU0 137 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 TMEM190Q8WZ59 177 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
LINC00339-213ENST00000642137 ARV1Q9H2C2 271 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 PEMTQ9UBM1 199 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 UFC1Q9Y3C8 167 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 TIMM9Q9Y5J7 89 aa9.41□□□□□ -0.9
LINC00339-213ENST00000642137 OVOL1O14753 267 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 IL4P05112 153 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 NKX2-5P52952 324 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-213ENST00000642137 B2MP61769 119 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 MIC13Q5XKP0 118 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 Q6ZRG5 221 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 LINC00482Q8N8I6 264 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 WFDC9Q8NEX5 89 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 GNPNAT1Q96EK6 184 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-213ENST00000642137 RNF125Q96EQ8 232 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 GINS3Q9BRX5 216 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 PSMG3Q9BT73 122 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-213ENST00000642137 ZNF471Q9BX82 626 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-213ENST00000642137 KCNIP2Q9NS61 270 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 SLC39A9Q9NUM3 307 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
LINC00339-213ENST00000642137 PXMP4Q9Y6I8 212 aa9.4□□□□□ -0.9
LINC00339-213ENST00000642137 A8MWP6 167 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 TSPAN15O95858 294 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 HNRNPCP07910 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00339-213ENST00000642137 C8orf88P0DMB2 117 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 NPPCP23582 126 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 ATP6V0CP27449 155 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 S100A7P31151 101 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 SERF2P84101 59 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 SLC51BQ86UW2 128 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 STPG3Q8N7X2 389 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 HSD17B11Q8NBQ5 300 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 RSG1Q9BU20 258 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 C20orf24Q9BUV8 137 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 ELOVL1Q9BW60 279 aa9.39□□□□□ -0.91
LINC00339-213ENST00000642137 DAZ1Q9NQZ3 744 aaKnown RBP9.39□□□□□ -0.91
LINC00339-213ENST00000642137 COL6A5A8TX70 2615 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
LINC00339-213ENST00000642137 BOLA2-SMG1P6H3BVE0 249 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 HYPMO75409 117 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 CSN3P07498 182 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
LINC00339-213ENST00000642137 ORM2P19652 201 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 CRYBB3P26998 211 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 LYZP61626 148 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 USF2Q15853 346 aaPredicted RBP9.38□□□□□ -0.91
LINC00339-213ENST00000642137 TM4SF20Q53R12 229 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 S100A7AQ86SG5 101 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 BAP18Q8IXM2 172 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 OR1L4Q8NGR5 311 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 OR2G3Q8NGZ4 309 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 STOML3Q8TAV4 291 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 MARC2Q969Z3 335 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 METTL26Q96S19 204 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 DNAJC4Q9NNZ3 241 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 SIGLEC8Q9NYZ4 499 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 PFDN2Q9UHV9 154 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 RABAC1Q9UI14 185 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 U3KQE9 123 aa9.38□□□□□ -0.91
LINC00339-213ENST00000642137 IGHV3OR16-8A0A075B7F1 116 aa9.37□□□□□ -0.91
LINC00339-213ENST00000642137 IGHV7-4-1A0A0J9YVY3 117 aa9.37□□□□□ -0.91
LINC00339-213ENST00000642137 A0A1W2PS18 150 aa9.37□□□□□ -0.91
LINC00339-213ENST00000642137 TMEM213A2RRL7 107 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms