RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 IGHV3OR16-12A0A075B7B8 117 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 DEFB131BA0A096LNP1 70 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 H3BMM0 161 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 BUB3O43684 328 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 GSTZ1O43708 216 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-213ENST00000641272 AP2S1P53680 142 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-213ENST00000641272 GPR141Q7Z602 305 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 RNF125Q96EQ8 232 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 DIRAS2Q96HU8 199 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 PRRT1Q99946 306 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 RBKSQ9H477 322 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 MCUBQ9NWR8 336 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 TMEM56-RWDD3S4R434 201 aa12.02□□□□□ -0.49
PHGDH-213ENST00000641272 FAT2Q9NYQ8 4349 aa12.01□□□□□ -0.49
PHGDH-213ENST00000641272 AMBPP02760 352 aa12.01□□□□□ -0.49
PHGDH-213ENST00000641272 HLA-DRB4P13762 266 aa12.01□□□□□ -0.49
PHGDH-213ENST00000641272 AKR1C4P17516 323 aa12.01□□□□□ -0.49
PHGDH-213ENST00000641272 EMP1P54849 157 aa12.01□□□□□ -0.49
PHGDH-213ENST00000641272 LYZL2Q7Z4W2 148 aa12.01□□□□□ -0.49
PHGDH-213ENST00000641272 LGI3Q8N145 548 aa12.01□□□□□ -0.49
PHGDH-213ENST00000641272 RNF126Q9BV68 326 aa12.01□□□□□ -0.49
PHGDH-213ENST00000641272 MRPS26Q9BYN8 205 aaKnown RBP12.01□□□□□ -0.49
PHGDH-213ENST00000641272 HLA-DRB4X5D2U9 266 aa12.01□□□□□ -0.49
PHGDH-213ENST00000641272 DNAH2Q9P225 4427 aa12□□□□□ -0.49
PHGDH-213ENST00000641272 ZFP92A6NM28 416 aa12□□□□□ -0.49
PHGDH-213ENST00000641272 LYZP61626 148 aa12□□□□□ -0.49
PHGDH-213ENST00000641272 NUTF2P61970 127 aaKnown RBP12□□□□□ -0.49
PHGDH-213ENST00000641272 ZNF90Q03938 601 aa12□□□□□ -0.49
PHGDH-213ENST00000641272 SMCO1Q147U7 214 aa12□□□□□ -0.49
PHGDH-213ENST00000641272 IL22RA2Q969J5 263 aa12□□□□□ -0.49
PHGDH-213ENST00000641272 LINC00052Q96N35 136 aa12□□□□□ -0.49
PHGDH-213ENST00000641272 C1QTNF4Q9BXJ3 329 aa12□□□□□ -0.49
PHGDH-213ENST00000641272 WDR12Q9GZL7 423 aaKnown RBP12□□□□□ -0.49
PHGDH-213ENST00000641272 HSPB7Q9UBY9 170 aa12□□□□□ -0.49
PHGDH-213ENST00000641272 ANKRD20A5PA0PJZ0 165 aa11.99□□□□□ -0.49
PHGDH-213ENST00000641272 CTDSPLO15194 276 aa11.99□□□□□ -0.49
PHGDH-213ENST00000641272 IAPPP10997 89 aa11.99□□□□□ -0.49
PHGDH-213ENST00000641272 ALDH3B2P48448 385 aa11.99□□□□□ -0.49
PHGDH-213ENST00000641272 SUPT4H1P63272 117 aaKnown RBP11.99□□□□□ -0.49
PHGDH-213ENST00000641272 OR2F1Q13607 317 aa11.99□□□□□ -0.49
PHGDH-213ENST00000641272 NOXA1Q86UR1 476 aa11.99□□□□□ -0.49
PHGDH-213ENST00000641272 OR1S1Q8NH92 325 aa11.99□□□□□ -0.49
PHGDH-213ENST00000641272 SLC35E1Q96K37 410 aa11.99□□□□□ -0.49
PHGDH-213ENST00000641272 PAIP2BQ9ULR5 123 aaKnown RBP11.99□□□□□ -0.49
PHGDH-213ENST00000641272 IGKV1D-37A0A075B6S9 117 aa11.98□□□□□ -0.49
PHGDH-213ENST00000641272 A0A0B4J2A0 478 aa11.98□□□□□ -0.49
PHGDH-213ENST00000641272 CCR6P51684 374 aa11.98□□□□□ -0.49
PHGDH-213ENST00000641272 KLF9Q13886 244 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-213ENST00000641272 COQ8AQ8NI60 647 aa11.98□□□□□ -0.49
PHGDH-213ENST00000641272 CCDC59Q9P031 241 aaKnown RBP11.98□□□□□ -0.49
PHGDH-213ENST00000641272 SHPKQ9UHJ6 478 aa11.98□□□□□ -0.49
PHGDH-213ENST00000641272 SCP2D1Q9UJQ7 156 aa11.98□□□□□ -0.49
PHGDH-213ENST00000641272 KCNIP3Q9Y2W7 256 aa11.98□□□□□ -0.49
PHGDH-213ENST00000641272 F6UB75 175 aa11.97□□□□□ -0.49
PHGDH-213ENST00000641272 M0R2N4 97 aa11.97□□□□□ -0.49
PHGDH-213ENST00000641272 NKX2-1P43699 371 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-213ENST00000641272 OR4B1Q8NGF8 309 aa11.97□□□□□ -0.49
PHGDH-213ENST00000641272 DYNC2LI1Q8TCX1 351 aa11.97□□□□□ -0.49
PHGDH-213ENST00000641272 PPP1R14BQ96C90 147 aa11.97□□□□□ -0.49
PHGDH-213ENST00000641272 NDUFAF3Q9BU61 184 aa11.97□□□□□ -0.49
PHGDH-213ENST00000641272 SLC35B3Q9H1N7 401 aa11.97□□□□□ -0.49
PHGDH-213ENST00000641272 U3KQ87 197 aa11.97□□□□□ -0.49
PHGDH-213ENST00000641272 DNAH17Q9UFH2 4485 aa11.97□□□□□ -0.49
PHGDH-213ENST00000641272 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-213ENST00000641272 GAMTQ14353 236 aa11.96□□□□□ -0.49
PHGDH-213ENST00000641272 OR8G2PQ6IF36 304 aa11.96□□□□□ -0.49
PHGDH-213ENST00000641272 ZNF705AQ6ZN79 300 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-213ENST00000641272 TMED4Q7Z7H5 227 aa11.96□□□□□ -0.49
PHGDH-213ENST00000641272 SAV1Q9H4B6 383 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-213ENST00000641272 SEPSECSQ9HD40 501 aaKnown RBP11.96□□□□□ -0.49
PHGDH-213ENST00000641272 ZNF705FA8MVS1 300 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-213ENST00000641272 SOCS3O14543 225 aa11.95□□□□□ -0.5
PHGDH-213ENST00000641272 ZNF705DP0CH99 300 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-213ENST00000641272 ZNF705BP0CI00 300 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-213ENST00000641272 ANXA3P12429 323 aa11.95□□□□□ -0.5
PHGDH-213ENST00000641272 HTN3P15516 51 aa11.95□□□□□ -0.5
PHGDH-213ENST00000641272 ZNF709Q8N972 641 aa11.95□□□□□ -0.5
PHGDH-213ENST00000641272 PCLOQ9Y6V0 5065 aa11.95□□□□□ -0.5
PHGDH-213ENST00000641272 PSMB3P49720 205 aa11.94□□□□□ -0.5
PHGDH-213ENST00000641272 FOXI2Q6ZQN5 318 aa11.94□□□□□ -0.5
PHGDH-213ENST00000641272 POM121L12Q8N7R1 296 aa11.94□□□□□ -0.5
PHGDH-213ENST00000641272 RAB2BQ8WUD1 216 aa11.94□□□□□ -0.5
PHGDH-213ENST00000641272 SCGB3A2Q96PL1 93 aa11.94□□□□□ -0.5
PHGDH-213ENST00000641272 PLA2G2EQ9NZK7 142 aa11.94□□□□□ -0.5
PHGDH-213ENST00000641272 CACFD1Q9UGQ2 172 aa11.94□□□□□ -0.5
PHGDH-213ENST00000641272 DYNC1H1Q14204 4646 aaKnown RBP11.93□□□□□ -0.5
PHGDH-213ENST00000641272 IGLV2-18A0A075B6J9 118 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 SPART-AS1P0CW21 52 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 P0DMU3 169 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 FAM231AP0DMU4 169 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 FAM231CP0DMU5 169 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 VAMP1P23763 118 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 ID1P41134 155 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 SRPXP78539 464 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 FAM222AQ5U5X8 452 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 UBE2DNLQ8IWF7 75 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 NEU1Q99519 415 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 SLC25A22Q9H936 323 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 RSL24D1Q9UHA3 163 aaKnown RBP11.93□□□□□ -0.5
PHGDH-213ENST00000641272 PFDN2Q9UHV9 154 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms