RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 WNK2Q9Y3S1 2297 aa13.54□□□□□ -0.24
PHGDH-211ENST00000641213 PSG1P11464 419 aa13.54□□□□□ -0.24
PHGDH-211ENST00000641213 ZFP36P26651 326 aaKnown RBP13.54□□□□□ -0.24
PHGDH-211ENST00000641213 OR1L6Q8NGR2 347 aa13.54□□□□□ -0.24
PHGDH-211ENST00000641213 TRAV34A0A0B4J273 112 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 A6NNC1 897 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 NBEAP1P0C6P0 100 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 FRMD6-AS1P0C7T7 363 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 GP9P14770 177 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 CTAG1AP78358 180 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 HES1Q14469 280 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 DNLZQ5SXM8 178 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 UNQ6494/PRO21346Q6UXR6 183 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 KIR3DL3Q8N743 410 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 ITLN2Q8WWU7 325 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-211ENST00000641213 UBTD1Q9HAC8 227 aa13.53□□□□□ -0.24
PHGDH-211ENST00000641213 K7EIM0 57 aa13.52□□□□□ -0.24
PHGDH-211ENST00000641213 HIST1H1BP16401 226 aaKnown RBP13.52□□□□□ -0.24
PHGDH-211ENST00000641213 GNG5P63218 68 aa13.52□□□□□ -0.24
PHGDH-211ENST00000641213 LEMD1Q68G75 181 aa13.52□□□□□ -0.24
PHGDH-211ENST00000641213 DYNAPQ8N1N2 210 aa13.52□□□□□ -0.24
PHGDH-211ENST00000641213 FAM103A1Q9BTL3 118 aaKnown RBP13.52□□□□□ -0.24
PHGDH-211ENST00000641213 HIGD1AQ9Y241 93 aa13.52□□□□□ -0.24
PHGDH-211ENST00000641213 IER3P46695 156 aa13.52□□□□□ -0.25
PHGDH-211ENST00000641213 UQCRFS1P47985 274 aa13.52□□□□□ -0.25
PHGDH-211ENST00000641213 LYZP61626 148 aa13.52□□□□□ -0.25
PHGDH-211ENST00000641213 C5orf64Q2M2E5 130 aa13.52□□□□□ -0.25
PHGDH-211ENST00000641213 RASL11BQ9BPW5 248 aa13.52□□□□□ -0.25
PHGDH-211ENST00000641213 MRPL18Q9H0U6 180 aaKnown RBP13.52□□□□□ -0.25
PHGDH-211ENST00000641213 EPDR1Q9UM22 224 aa13.52□□□□□ -0.25
PHGDH-211ENST00000641213 PGPA6NDG6 321 aa13.51□□□□□ -0.25
PHGDH-211ENST00000641213 IGKV1-17P01599 117 aa13.51□□□□□ -0.25
PHGDH-211ENST00000641213 SLC25A5P05141 298 aaKnown RBP13.51□□□□□ -0.25
PHGDH-211ENST00000641213 HOXB4P17483 251 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-211ENST00000641213 CX3CL1P78423 397 aa13.51□□□□□ -0.25
PHGDH-211ENST00000641213 BAGE2Q86Y30 109 aa13.51□□□□□ -0.25
PHGDH-211ENST00000641213 GBGT1Q8N5D6 347 aa13.51□□□□□ -0.25
PHGDH-211ENST00000641213 PRDM13Q9H4Q3 707 aa13.51□□□□□ -0.25
PHGDH-211ENST00000641213 A0A1B0GUS0 222 aa13.51□□□□□ -0.25
PHGDH-211ENST00000641213 SMIM27A0A1W2PRY6 76 aa13.51□□□□□ -0.25
PHGDH-211ENST00000641213 SERTAD4Q9NUC0 356 aa13.51□□□□□ -0.25
PHGDH-211ENST00000641213 JOSD1Q15040 202 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-211ENST00000641213 TMEM183BQ1AE95 376 aa13.5□□□□□ -0.25
PHGDH-211ENST00000641213 CCDC144NLQ6NUI1 221 aa13.5□□□□□ -0.25
PHGDH-211ENST00000641213 TMEM256Q8N2U0 113 aa13.5□□□□□ -0.25
PHGDH-211ENST00000641213 TMEM18Q96B42 140 aa13.5□□□□□ -0.25
PHGDH-211ENST00000641213 GNB1LQ9BYB4 327 aa13.5□□□□□ -0.25
PHGDH-211ENST00000641213 TRBV9A0A0B4J1U6 114 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 ZNF705GA8MUZ8 300 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-211ENST00000641213 GNLYP22749 145 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 EFNA4P52798 201 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 TCL1AP56279 114 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 ASPHD1Q5U4P2 390 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 SLC25A39Q9BZJ4 359 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-211ENST00000641213 SIRPDQ9H106 197 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 OOSP1A8MZH6 123 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 SNURFLB1AK76 121 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 H3BTX0 84 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 C19orf84I3L1E1 186 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 SPINK4O60575 86 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 RD3LP0DJH9 198 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 KLF17Q5JT82 389 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-211ENST00000641213 MINOS1Q5TGZ0 78 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 FAM231DQ6ZW35 169 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 Q8N6K4 173 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 OR5R1Q8NH85 324 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 FAM168AQ92567 244 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
PHGDH-211ENST00000641213 KLF12Q9Y4X4 402 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 MINOS1-NBL1R4GNA1 71 aa13.49□□□□□ -0.25
PHGDH-211ENST00000641213 GRIFINA4D1Z8 144 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 NUPR1O60356 82 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 GZMBP10144 247 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 UBE2G1P62253 170 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 RBM14Q96PK6 669 aaKnown RBP13.48□□□□□ -0.25
PHGDH-211ENST00000641213 CA1P00915 261 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-211ENST00000641213 SLC35B1P78383 322 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 RPL19P84098 196 aaKnown RBP13.48□□□□□ -0.25
PHGDH-211ENST00000641213 EBI3Q14213 229 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 ZNF562Q6V9R5 426 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 C5orf17Q8NAS9 161 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 MBD6Q96DN6 1003 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 Q9H3A6 140 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 C7orf69Q9H7B7 122 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 TMEM14CQ9P0S9 112 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 RPH3ALQ9UNE2 315 aa13.48□□□□□ -0.25
PHGDH-211ENST00000641213 NCBP2LA6PVI3 153 aaKnown RBP13.47□□□□□ -0.25
PHGDH-211ENST00000641213 NUDT10Q8NFP7 164 aa13.47□□□□□ -0.25
PHGDH-211ENST00000641213 NUDT11Q96G61 164 aa13.47□□□□□ -0.25
PHGDH-211ENST00000641213 SGK494Q96LW2 274 aa13.47□□□□□ -0.25
PHGDH-211ENST00000641213 ATG101Q9BSB4 218 aa13.47□□□□□ -0.25
PHGDH-211ENST00000641213 TP53TG3Q9ULZ0 132 aa13.47□□□□□ -0.25
PHGDH-211ENST00000641213 NPIPB5A8MRT5 1133 aa13.46□□□□□ -0.25
PHGDH-211ENST00000641213 GATCO43716 136 aaKnown RBP13.46□□□□□ -0.25
PHGDH-211ENST00000641213 WDR73Q6P4I2 378 aa13.46□□□□□ -0.25
PHGDH-211ENST00000641213 TMEM136Q6ZRR5 245 aa13.46□□□□□ -0.25
PHGDH-211ENST00000641213 ARPC1AQ92747 370 aa13.46□□□□□ -0.25
PHGDH-211ENST00000641213 FANCD2OSQ96PS1 177 aa13.46□□□□□ -0.25
PHGDH-211ENST00000641213 ZNF586Q9NXT0 402 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms