RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 IGHV3-49A0A0A0MS15 119 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 A0A0D9SG52 128 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 K7EMT4 169 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 TOMM40O96008 361 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 RD3LP0DJH9 198 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 SULT1A1P50225 295 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 SLC38A11Q08AI6 406 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 OR2F1Q13607 317 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 BTNL8Q6UX41 500 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 STX12Q86Y82 276 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 THAP8Q8NA92 274 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 MARC2Q969Z3 335 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 GINS3Q9BRX5 216 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 MRPL27Q9P0M9 148 aaKnown RBP13.02□□□□□ -0.33
CLN6-218ENST00000637223 MLXQ9UH92 298 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 TNFSF18Q9UNG2 199 aa13.02□□□□□ -0.33
CLN6-218ENST00000637223 FXYD6-FXYD2A0A087WZ82 144 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 C8orf88P0DMB2 117 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 PSG1P11464 419 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 NUP62P37198 522 aaPredicted RBP13.01□□□□□ -0.33
CLN6-218ENST00000637223 P2RY1P47900 373 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 DEFB114Q30KQ6 69 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 CD300EQ496F6 205 aaPredicted RBP13.01□□□□□ -0.33
CLN6-218ENST00000637223 LAMTOR1Q6IAA8 161 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 TMEM144Q7Z5S9 345 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 INO80EQ8NBZ0 244 aaPredicted RBP13.01□□□□□ -0.33
CLN6-218ENST00000637223 TRGV9Q99603 122 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 MBD2Q9UBB5 411 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 DNAH3Q8TD57 4116 aa13.01□□□□□ -0.33
CLN6-218ENST00000637223 KMT2CQ8NEZ4 4911 aaKnown RBP13.01□□□□□ -0.33
CLN6-218ENST00000637223 IGHV3OR16-13A0A075B7E8 117 aa13□□□□□ -0.33
CLN6-218ENST00000637223 IGHV3-74A0A0B4J1X5 117 aa13□□□□□ -0.33
CLN6-218ENST00000637223 IGHV7-4-1A0A0J9YVY3 117 aa13□□□□□ -0.33
CLN6-218ENST00000637223 IZUMO1RA6ND01 250 aa13□□□□□ -0.33
CLN6-218ENST00000637223 IL4P05112 153 aa13□□□□□ -0.33
CLN6-218ENST00000637223 NKX2-5P52952 324 aaPredicted RBP13□□□□□ -0.33
CLN6-218ENST00000637223 EWSR1Q01844 656 aaKnown RBP eCLIP13□□□□□ -0.337e-6■■□□□ 12.2
CLN6-218ENST00000637223 LILRB2Q8N423 598 aa13□□□□□ -0.33
CLN6-218ENST00000637223 PRR25Q96S07 402 aa13□□□□□ -0.33
CLN6-218ENST00000637223 GGACTQ9BVM4 153 aa13□□□□□ -0.33
CLN6-218ENST00000637223 MFFQ9GZY8 342 aa13□□□□□ -0.33
CLN6-218ENST00000637223 SLC25A31Q9H0C2 315 aa13□□□□□ -0.33
CLN6-218ENST00000637223 AURKAIP1Q9NWT8 199 aaPredicted RBP13□□□□□ -0.33
CLN6-218ENST00000637223 TECRQ9NZ01 308 aaKnown RBP13□□□□□ -0.33
CLN6-218ENST00000637223 ZMAT5Q9UDW3 170 aaKnown RBP13□□□□□ -0.33
CLN6-218ENST00000637223 IGHV3-66A0A0C4DH42 116 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 FNDC10F2Z333 226 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 SCAF4O95104 1147 aaKnown RBP12.99□□□□□ -0.33
CLN6-218ENST00000637223 APOHP02749 345 aaPredicted RBP12.99□□□□□ -0.33
CLN6-218ENST00000637223 FABP1P07148 127 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 NHLH2Q02577 135 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 LGALSLQ3ZCW2 172 aaPredicted RBP12.99□□□□□ -0.33
CLN6-218ENST00000637223 OR51G1Q8NGK1 321 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 AQP10Q96PS8 301 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 RHPN1-AS1Q9BWJ2 59 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 NPVFQ9HCQ7 196 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 SMPXQ9UHP9 88 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 ZNF256Q9Y2P7 627 aaPredicted RBP12.99□□□□□ -0.33
CLN6-218ENST00000637223 HSPB11Q9Y547 144 aa12.99□□□□□ -0.33
CLN6-218ENST00000637223 ARPC5O15511 151 aa12.98□□□□□ -0.33
CLN6-218ENST00000637223 GATA2P23769 480 aaPredicted RBP12.98□□□□□ -0.33
CLN6-218ENST00000637223 S100A11P31949 105 aa12.98□□□□□ -0.33
CLN6-218ENST00000637223 HBG1P69891 147 aa12.98□□□□□ -0.33
CLN6-218ENST00000637223 HBG2P69892 147 aa12.98□□□□□ -0.33
CLN6-218ENST00000637223 USF2Q15853 346 aaPredicted RBP12.98□□□□□ -0.33
CLN6-218ENST00000637223 LCN12Q6JVE5 192 aa12.98□□□□□ -0.33
CLN6-218ENST00000637223 KCNRGQ8N5I3 272 aa12.98□□□□□ -0.33
CLN6-218ENST00000637223 METTL26Q96S19 204 aa12.98□□□□□ -0.33
CLN6-218ENST00000637223 PBDC1Q9BVG4 233 aa12.98□□□□□ -0.33
CLN6-218ENST00000637223 WI2-2373I1.2A0A1W2PRP0 233 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 CHEK1O14757 476 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 NPPCP23582 126 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 LYZP61626 148 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 TEPPQ6URK8 271 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 TMEM182Q6ZP80 229 aaPredicted RBP12.97□□□□□ -0.33
CLN6-218ENST00000637223 CYP2G1PQ6ZSU1 146 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 TMEM61Q8N0U2 210 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 OR2K2Q8NGT1 345 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 ST8SIA2Q92186 375 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 TMEM147Q9BVK8 224 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 UQCC1Q9NVA1 299 aa12.97□□□□□ -0.33
CLN6-218ENST00000637223 UBE2L5PA0A1B0GUS4 154 aa12.96□□□□□ -0.33
CLN6-218ENST00000637223 TAAR5O14804 337 aa12.96□□□□□ -0.33
CLN6-218ENST00000637223 GP9P14770 177 aa12.96□□□□□ -0.33
CLN6-218ENST00000637223 CXCL2P19875 107 aa12.96□□□□□ -0.33
CLN6-218ENST00000637223 CRYBB3P26998 211 aa12.96□□□□□ -0.33
CLN6-218ENST00000637223 RPL12P30050 165 aaKnown RBP12.96□□□□□ -0.33
CLN6-218ENST00000637223 GUCA2BQ16661 112 aa12.96□□□□□ -0.33
CLN6-218ENST00000637223 OR5C1Q8NGR4 320 aa12.96□□□□□ -0.33
CLN6-218ENST00000637223 RNF2Q99496 336 aa12.96□□□□□ -0.33
CLN6-218ENST00000637223 RNF222A6NCQ9 220 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 BAXQ07812 192 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 CLINT1Q14677 625 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 ATP6V1FQ16864 119 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 VWC2Q2TAL6 325 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 RBPMS2Q6ZRY4 209 aaKnown RBP12.95□□□□□ -0.34
CLN6-218ENST00000637223 TMUB2Q71RG4 321 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 BPIFCQ8NFQ6 507 aa12.95□□□□□ -0.34
CLN6-218ENST00000637223 MGST2Q99735 147 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms