RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 I3L521 148 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 OR2C1O95371 312 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 CD28P10747 220 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 PSG1P11464 419 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 ARL3P36405 182 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 FFAR4Q5NUL3 377 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 AKR1C8PQ5T2L2 129 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 MIC13Q5XKP0 118 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 TMEM182Q6ZP80 229 aaPredicted RBP10.33□□□□□ -0.76
LINC00643-207ENST00000637212 S100A7AQ86SG5 101 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 OR51G1Q8NGK1 321 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 LRRC20Q8TCA0 184 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 RNF141Q8WVD5 230 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 C4orf3Q8WVX3 66 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 GNB4Q9HAV0 340 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 DNAJC4Q9NNZ3 241 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 UBQLN2Q9UHD9 624 aa10.33□□□□□ -0.76
LINC00643-207ENST00000637212 ANKRD34BA5PLL1 514 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 HYPMO75409 117 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 YIF1AO95070 293 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 M6PRP20645 277 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 SULT1A2P50226 295 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 TMEM41BQ5BJD5 291 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 ALKAL2Q6UX46 152 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 PRIMA1Q86XR5 153 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 GPHB5Q86YW7 130 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 OR1L4Q8NGR5 311 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 GATAD1Q8WUU5 269 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 RNF2Q99496 336 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 PLA2G2EQ9NZK7 142 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 RFNGQ9Y644 331 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 FBN3Q75N90 2809 aa10.32□□□□□ -0.76
LINC00643-207ENST00000637212 NDUFA4O00483 81 aa10.31□□□□□ -0.76
LINC00643-207ENST00000637212 RGS13O14921 159 aa10.31□□□□□ -0.76
LINC00643-207ENST00000637212 GATA2P23769 480 aaPredicted RBP10.31□□□□□ -0.76
LINC00643-207ENST00000637212 S100A7P31151 101 aa10.31□□□□□ -0.76
LINC00643-207ENST00000637212 FAM106AQ4KMX7 169 aa10.31□□□□□ -0.76
LINC00643-207ENST00000637212 OR10G4Q8NGN3 311 aa10.31□□□□□ -0.76
LINC00643-207ENST00000637212 OR10G9Q8NGN4 311 aa10.31□□□□□ -0.76
LINC00643-207ENST00000637212 OR10G7Q8NGN6 311 aa10.31□□□□□ -0.76
LINC00643-207ENST00000637212 SAT2Q96F10 170 aaPredicted RBP10.31□□□□□ -0.76
LINC00643-207ENST00000637212 PFDN5Q99471 154 aa10.31□□□□□ -0.76
LINC00643-207ENST00000637212 RPRMQ9NS64 109 aa10.31□□□□□ -0.76
LINC00643-207ENST00000637212 MRPL27Q9P0M9 148 aaKnown RBP10.31□□□□□ -0.76
LINC00643-207ENST00000637212 PPP5D1E7EU14 171 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 BMPR1BO00238 502 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 TRBV12-3P01733 135 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 ZP3P21754 424 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 AWAT1Q58HT5 328 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 TOMM20LQ6UXN7 152 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 NDUFA11Q86Y39 141 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 OR1N2Q8NGR9 330 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 OR5B12Q96R08 314 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
LINC00643-207ENST00000637212 ACTR3CQ9C0K3 210 aaPredicted RBP10.3□□□□□ -0.76
LINC00643-207ENST00000637212 PFDN2Q9UHV9 154 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 RNF24Q9Y225 148 aa10.3□□□□□ -0.76
LINC00643-207ENST00000637212 PUS1Q9Y606 427 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00643-207ENST00000637212 SEC14L6B5MCN3 397 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 COX7A2P2O60397 106 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 ORM2P19652 201 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 ELLP55199 621 aaPredicted RBP10.29□□□□□ -0.76
LINC00643-207ENST00000637212 RAB14P61106 215 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 BLOC1S1P78537 153 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 KRTAP24-1Q3LI83 254 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 C10orf113Q5VZT2 155 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 PATE2Q6UY27 113 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 RPP25LQ8N5L8 163 aaKnown RBP10.29□□□□□ -0.76
LINC00643-207ENST00000637212 TMEM37Q8WXS4 190 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 TMEM158Q8WZ71 300 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 DPF1Q92782 380 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 RNF125Q96EQ8 232 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 ZNF414Q96IQ9 312 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 VSIRQ9H7M9 311 aa10.29□□□□□ -0.76
LINC00643-207ENST00000637212 A0A1W2PPV4 95 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 NUDT19A8MXV4 375 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 LINC01619G3V211 115 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 K7EMT4 169 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 LGALS9O00182 355 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 IL4P05112 153 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 KRTAP10-3P60369 221 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 RAB2AP61019 212 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 LYZP61626 148 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 RHOBP62745 196 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 KLF5Q13887 457 aaPredicted RBP10.28□□□□□ -0.76
LINC00643-207ENST00000637212 RPEL1Q2QD12 228 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 KHDC1LQ5JSQ8 128 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 KLHL30-AS1Q8NEE0 82 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 OR1B1Q8NGR6 318 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 MBD3L1Q8WWY6 194 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 MRPL32Q9BYC8 188 aaKnown RBP10.28□□□□□ -0.76
LINC00643-207ENST00000637212 HIGD1AQ9Y241 93 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 ATRQ13535 2644 aa10.28□□□□□ -0.76
LINC00643-207ENST00000637212 CUBNO60494 3623 aa10.27□□□□□ -0.77
LINC00643-207ENST00000637212 ZNF705EA8MWA4 302 aaPredicted RBP10.27□□□□□ -0.77
LINC00643-207ENST00000637212 OR5G3P0C626 314 aa10.27□□□□□ -0.77
LINC00643-207ENST00000637212 GCSAMLQ5JQS6 135 aa10.27□□□□□ -0.77
LINC00643-207ENST00000637212 FAM74A1Q5RGS3 127 aa10.27□□□□□ -0.77
LINC00643-207ENST00000637212 C18orf65Q6ZTR6 163 aa10.27□□□□□ -0.77
LINC00643-207ENST00000637212 C11orf44Q8N8P7 122 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms