RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 TMEM231Q9H6L2 316 aa11.67□□□□□ -0.54
CLN6-211ENST00000635754 IGKV1OR2-108A0A075B7D4 117 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 IGHV3OR16-13A0A075B7E8 117 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 IGHV3-74A0A0B4J1X5 117 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 A0A1W2PS18 150 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 FAM24AA6NFZ4 105 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 PET100P0DJ07 73 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 ZNF90Q03938 601 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 TMEM144Q7Z5S9 345 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 STX12Q86Y82 276 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 PPP1R1CQ8WVI7 109 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 GGACTQ9BVM4 153 aa11.66□□□□□ -0.54
CLN6-211ENST00000635754 ZNF785A8K8V0 405 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 E5RGE8 158 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 CST7O76096 145 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 APOHP02749 345 aaPredicted RBP11.65□□□□□ -0.54
CLN6-211ENST00000635754 CD5P06127 495 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 CRYBB3P26998 211 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 USF2Q15853 346 aaPredicted RBP11.65□□□□□ -0.54
CLN6-211ENST00000635754 TMEM252Q8N6L7 170 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 ST8SIA2Q92186 375 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 RNF125Q96EQ8 232 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 RNF2Q99496 336 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 VSIRQ9H7M9 311 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 NPVFQ9HCQ7 196 aa11.65□□□□□ -0.54
CLN6-211ENST00000635754 LSM4Q9Y4Z0 139 aaKnown RBP11.65□□□□□ -0.54
CLN6-211ENST00000635754 TSPAN4O14817 238 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 HNRNPCP07910 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLN6-211ENST00000635754 CXCL3P19876 107 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 SULT1A1P50225 295 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 CD81P60033 236 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 SLC38A11Q08AI6 406 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 ARL16Q0P5N6 197 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 OR2F1Q13607 317 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 GRAMD2BQ96HH9 432 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 SPAG8Q99932 426 aaPredicted RBP11.64□□□□□ -0.55
CLN6-211ENST00000635754 PBDC1Q9BVG4 233 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 OR5AC2Q9NZP5 309 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 RABAC1Q9UI14 185 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 SMAD5-AS1Q9Y6J3 95 aa11.64□□□□□ -0.55
CLN6-211ENST00000635754 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 IGHV3-66A0A0C4DH42 116 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 IGSF23A1L1A6 192 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 CFDP00746 253 aaPredicted RBP11.63□□□□□ -0.55
CLN6-211ENST00000635754 P2RY1P47900 373 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 LYZP61626 148 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 HBG1P69891 147 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 HBG2P69892 147 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 FCN2Q15485 313 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 LILRB2Q8N423 598 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 BPIFCQ8NFQ6 507 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 OR11H7Q8NGC8 314 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 SLC25A31Q9H0C2 315 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 PFDN2Q9UHV9 154 aa11.63□□□□□ -0.55
CLN6-211ENST00000635754 H0YIZ8 118 aa11.62□□□□□ -0.55
CLN6-211ENST00000635754 MPC2O95563 127 aa11.62□□□□□ -0.55
CLN6-211ENST00000635754 S100A11P31949 105 aa11.62□□□□□ -0.55
CLN6-211ENST00000635754 NUP62P37198 522 aaPredicted RBP11.62□□□□□ -0.55
CLN6-211ENST00000635754 TEPPQ6URK8 271 aa11.62□□□□□ -0.55
CLN6-211ENST00000635754 TCF24Q7RTU0 167 aa11.62□□□□□ -0.55
CLN6-211ENST00000635754 Q8N1Y9 231 aa11.62□□□□□ -0.55
CLN6-211ENST00000635754 NEURL2Q9BR09 285 aa11.62□□□□□ -0.55
CLN6-211ENST00000635754 OR4C46A6NHA9 309 aa11.61□□□□□ -0.55
CLN6-211ENST00000635754 EIF2B2P49770 351 aaKnown RBP11.61□□□□□ -0.55
CLN6-211ENST00000635754 CYP2G1PQ6ZSU1 146 aa11.61□□□□□ -0.55
CLN6-211ENST00000635754 UQCC1Q9NVA1 299 aa11.61□□□□□ -0.55
CLN6-211ENST00000635754 U3KQE9 123 aa11.61□□□□□ -0.55
CLN6-211ENST00000635754 DFFBO76075 338 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 CD7P09564 240 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 SELENOTP62341 195 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 RPL11P62913 178 aaKnown RBP11.6□□□□□ -0.55
CLN6-211ENST00000635754 PAFAH1B2P68402 229 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 EWSR1Q01844 656 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLN6-211ENST00000635754 FAM90A2PQ658T7 463 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 TMEM147Q9BVK8 224 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 IGKV3-7A0A075B6H7 116 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 IGHV4-30-4P0DP06 118 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
CLN6-211ENST00000635754 BAXQ07812 192 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 ATP6V1FQ16864 119 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 ZNF546Q86UE3 836 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 ASB13Q8WXK3 278 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 PPP1R14BQ96C90 147 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 RNF126Q9BV68 326 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 MBD2Q9UBB5 411 aa11.6□□□□□ -0.55
CLN6-211ENST00000635754 HELTA6NFD8 242 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 AGPAT2O15120 278 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 BUB3O43684 328 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 GIPP09681 153 aaPredicted RBP11.59□□□□□ -0.55
CLN6-211ENST00000635754 S100A7P31151 101 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 NHLH2Q02577 135 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 RAB31Q13636 194 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 VWC2Q2TAL6 325 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 C16orf54Q6UWD8 224 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 TMEM182Q6ZP80 229 aaPredicted RBP11.59□□□□□ -0.55
CLN6-211ENST00000635754 GBGT1Q8N5D6 347 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 THAP6Q8TBB0 222 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
CLN6-211ENST00000635754 UBE2L5PA0A1B0GUS4 154 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms