RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 ZNF124Q15973 351 aa13.46□□□□□ -0.25
CLN6-210ENST00000635747 C16orf54Q6UWD8 224 aa13.46□□□□□ -0.25
CLN6-210ENST00000635747 STHQ8IWL8 128 aa13.46□□□□□ -0.25
CLN6-210ENST00000635747 OR51G1Q8NGK1 321 aa13.46□□□□□ -0.25
CLN6-210ENST00000635747 A0A0J9YWU9 116 aa13.45□□□□□ -0.26
CLN6-210ENST00000635747 ZFP92A6NM28 416 aa13.45□□□□□ -0.26
CLN6-210ENST00000635747 HOXB5P09067 269 aa13.45□□□□□ -0.26
CLN6-210ENST00000635747 PSG1P11464 419 aa13.45□□□□□ -0.26
CLN6-210ENST00000635747 GAMTQ14353 236 aa13.45□□□□□ -0.26
CLN6-210ENST00000635747 LYG2Q86SG7 212 aa13.45□□□□□ -0.26
CLN6-210ENST00000635747 LYSTQ99698 3801 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 C9orf170A2RU37 121 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 SYNGR2O43760 224 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 JTBO76095 146 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 IAPPP10997 89 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 USF2Q15853 346 aaPredicted RBP13.44□□□□□ -0.26
CLN6-210ENST00000635747 GGNBP1Q5YKI7 109 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 LEMD1Q68G75 181 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 COQ8AQ8NI60 647 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 DCANP1Q8TF63 244 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 GLMPQ8WWB7 406 aa13.44□□□□□ -0.26
CLN6-210ENST00000635747 BUB3O43684 328 aa13.43□□□□□ -0.26
CLN6-210ENST00000635747 IFNA21P01568 189 aa13.43□□□□□ -0.26
CLN6-210ENST00000635747 DHRS2Q13268 280 aa13.43□□□□□ -0.26
CLN6-210ENST00000635747 ASAH1Q13510 395 aa13.43□□□□□ -0.26
CLN6-210ENST00000635747 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
CLN6-210ENST00000635747 OR8G2PQ6IF36 304 aa13.43□□□□□ -0.26
CLN6-210ENST00000635747 FAM24BQ8N5W8 94 aa13.43□□□□□ -0.26
CLN6-210ENST00000635747 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
CLN6-210ENST00000635747 RARRES2Q99969 163 aa13.43□□□□□ -0.26
CLN6-210ENST00000635747 SEPSECSQ9HD40 501 aaKnown RBP13.43□□□□□ -0.26
CLN6-210ENST00000635747 PAIP2BQ9ULR5 123 aaKnown RBP13.43□□□□□ -0.26
CLN6-210ENST00000635747 SNRPGP15A8MWD9 76 aa13.42□□□□□ -0.26
CLN6-210ENST00000635747 WRBO00258 174 aa13.42□□□□□ -0.26
CLN6-210ENST00000635747 PLA2G10O15496 165 aa13.42□□□□□ -0.26
CLN6-210ENST00000635747 OR4E1P0C645 316 aa13.42□□□□□ -0.26
CLN6-210ENST00000635747 LINC00854A0A1B0GVQ3 168 aa13.41□□□□□ -0.26
CLN6-210ENST00000635747 LYRM1O43325 122 aa13.41□□□□□ -0.26
CLN6-210ENST00000635747 CFDP00746 253 aaPredicted RBP13.41□□□□□ -0.26
CLN6-210ENST00000635747 CA1P00915 261 aaPredicted RBP13.41□□□□□ -0.26
CLN6-210ENST00000635747 ZNF688P0C7X2 276 aa13.41□□□□□ -0.26
CLN6-210ENST00000635747 SNRPD3P62318 126 aaKnown RBP13.41□□□□□ -0.26
CLN6-210ENST00000635747 MORN3Q6PF18 240 aaPredicted RBP13.41□□□□□ -0.26
CLN6-210ENST00000635747 SIGLEC15Q6ZMC9 328 aa13.41□□□□□ -0.26
CLN6-210ENST00000635747 TRGV9Q99603 122 aa13.41□□□□□ -0.26
CLN6-210ENST00000635747 PBDC1Q9BVG4 233 aa13.41□□□□□ -0.26
CLN6-210ENST00000635747 MAGT1Q9H0U3 335 aa13.41□□□□□ -0.26
CLN6-210ENST00000635747 NRN1Q9NPD7 142 aa13.41□□□□□ -0.26
CLN6-210ENST00000635747 RYR2Q92736 4967 aa13.41□□□□□ -0.26
CLN6-210ENST00000635747 IGKV1D-37A0A075B6S9 117 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 CXorf65A6NEN9 183 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 SPP1P10451 314 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 DEFA1P59665 94 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 DEFA3P59666 94 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 ID3Q02535 119 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 MZT2BQ6NZ67 158 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 FBXL17Q9UF56 701 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 TBC1D24Q9ULP9 559 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 FLVCR2Q9UPI3 526 aa13.4□□□□□ -0.26
CLN6-210ENST00000635747 STRAPQ9Y3F4 350 aaKnown RBP13.4□□□□□ -0.26
CLN6-210ENST00000635747 NUPR2A6NF83 97 aa13.39□□□□□ -0.27
CLN6-210ENST00000635747 BTCP35070 178 aa13.39□□□□□ -0.27
CLN6-210ENST00000635747 IFITM3Q01628 133 aa13.39□□□□□ -0.27
CLN6-210ENST00000635747 ZNF90Q03938 601 aa13.39□□□□□ -0.27
CLN6-210ENST00000635747 C4orf46Q504U0 113 aa13.39□□□□□ -0.27
CLN6-210ENST00000635747 SPANXN5Q5MJ07 72 aa13.39□□□□□ -0.27
CLN6-210ENST00000635747 C1orf194Q5T5A4 169 aa13.39□□□□□ -0.27
CLN6-210ENST00000635747 TRPT1Q86TN4 253 aaKnown RBP13.39□□□□□ -0.27
CLN6-210ENST00000635747 THAP8Q8NA92 274 aa13.39□□□□□ -0.27
CLN6-210ENST00000635747 OR11H2Q8NH07 326 aa13.39□□□□□ -0.27
CLN6-210ENST00000635747 ADAP1O75689 374 aa13.38□□□□□ -0.27
CLN6-210ENST00000635747 S100A7P31151 101 aa13.38□□□□□ -0.27
CLN6-210ENST00000635747 NKX2-1P43699 371 aaPredicted RBP13.38□□□□□ -0.27
CLN6-210ENST00000635747 ANXA7P20073 488 aaKnown RBP13.37□□□□□ -0.27
CLN6-210ENST00000635747 LYZP61626 148 aa13.37□□□□□ -0.27
CLN6-210ENST00000635747 PMS2P11Q13670 270 aa13.37□□□□□ -0.27
CLN6-210ENST00000635747 PSMG4Q5JS54 123 aa13.37□□□□□ -0.27
CLN6-210ENST00000635747 ACTL10Q5JWF8 245 aa13.37□□□□□ -0.27
CLN6-210ENST00000635747 RAB40CQ96S21 281 aa13.37□□□□□ -0.27
CLN6-210ENST00000635747 C11orf68Q9H3H3 251 aaKnown RBP13.37□□□□□ -0.27
CLN6-210ENST00000635747 KNCNA6PVL3 124 aa13.36□□□□□ -0.27
CLN6-210ENST00000635747 PRSS46E5RG02 174 aa13.36□□□□□ -0.27
CLN6-210ENST00000635747 NUTF2P61970 127 aaKnown RBP13.36□□□□□ -0.27
CLN6-210ENST00000635747 EWSR1Q01844 656 aaKnown RBP eCLIP13.36□□□□□ -0.277e-6■■□□□ 12.2
CLN6-210ENST00000635747 OR4D5Q8NGN0 318 aa13.36□□□□□ -0.27
CLN6-210ENST00000635747 PPP1R14BQ96C90 147 aa13.36□□□□□ -0.27
CLN6-210ENST00000635747 SLC45A2Q9UMX9 530 aa13.36□□□□□ -0.27
CLN6-210ENST00000635747 KLK5Q9Y337 293 aaPredicted RBP13.36□□□□□ -0.27
CLN6-210ENST00000635747 IGKV1OR2-108A0A075B7D4 117 aa13.35□□□□□ -0.27
CLN6-210ENST00000635747 ID1P41134 155 aa13.35□□□□□ -0.27
CLN6-210ENST00000635747 POLR2GP62487 172 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLN6-210ENST00000635747 OR2F1Q13607 317 aa13.35□□□□□ -0.27
CLN6-210ENST00000635747 SAMD13Q5VXD3 122 aa13.35□□□□□ -0.27
CLN6-210ENST00000635747 CEMP1Q6PRD7 247 aaPredicted RBP13.35□□□□□ -0.27
CLN6-210ENST00000635747 MITD1Q8WV92 249 aa13.35□□□□□ -0.27
CLN6-210ENST00000635747 SMIM8Q96KF7 97 aa13.35□□□□□ -0.27
CLN6-210ENST00000635747 MFFQ9GZY8 342 aa13.35□□□□□ -0.27
CLN6-210ENST00000635747 PSENENQ9NZ42 101 aa13.35□□□□□ -0.27
CLN6-210ENST00000635747 FAM240BA0A1B0GVZ2 78 aa13.34□□□□□ -0.27
CLN6-210ENST00000635747 H3BP45 60 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms