RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 LAGE3Q14657 143 aa17.28■□□□□ 0.36
SMARCA2-227ENST00000634760 USMG5Q96IX5 58 aa17.28■□□□□ 0.36
SMARCA2-227ENST00000634760 UNC13CQ8NB66 2214 aa17.28■□□□□ 0.36
SMARCA2-227ENST00000634760 PSPNO60542 156 aa17.28■□□□□ 0.36
SMARCA2-227ENST00000634760 MALP21145 153 aa17.28■□□□□ 0.36
SMARCA2-227ENST00000634760 IGHV3OR16-8A0A075B7F1 116 aa17.28■□□□□ 0.36
SMARCA2-227ENST00000634760 TRBV7-9A0A0J9YWB2 115 aa17.28■□□□□ 0.36
SMARCA2-227ENST00000634760 TRAV40A0A0B4J280 105 aa17.27■□□□□ 0.36
SMARCA2-227ENST00000634760 TYMSP04818 313 aa17.27■□□□□ 0.36
SMARCA2-227ENST00000634760 FOXG1P55316 489 aaPredicted RBP17.27■□□□□ 0.36
SMARCA2-227ENST00000634760 ERVK11-1P61568 191 aa17.27■□□□□ 0.36
SMARCA2-227ENST00000634760 GTSCR1Q86UQ5 136 aa17.27■□□□□ 0.36
SMARCA2-227ENST00000634760 ST6GALNAC6Q969X2 333 aa17.27■□□□□ 0.36
SMARCA2-227ENST00000634760 BUB1B-PAK6H3BSN5 160 aa17.27■□□□□ 0.35
SMARCA2-227ENST00000634760 TOMM40O96008 361 aa17.27■□□□□ 0.35
SMARCA2-227ENST00000634760 LYNX1G3V0Z9 82 aa17.26■□□□□ 0.35
SMARCA2-227ENST00000634760 LYNX1P0DP58 116 aa17.26■□□□□ 0.35
SMARCA2-227ENST00000634760 TMEM155Q4W5P6 130 aa17.26■□□□□ 0.35
SMARCA2-227ENST00000634760 ACTL10Q5JWF8 245 aa17.26■□□□□ 0.35
SMARCA2-227ENST00000634760 TRAV5A0A0B4J249 113 aa17.26■□□□□ 0.35
SMARCA2-227ENST00000634760 A0A1W2PRX2 142 aa17.26■□□□□ 0.35
SMARCA2-227ENST00000634760 PSG1P11464 419 aa17.26■□□□□ 0.35
SMARCA2-227ENST00000634760 ZNF585BQ52M93 769 aa17.26■□□□□ 0.35
SMARCA2-227ENST00000634760 LINC00477Q96M19 166 aa17.26■□□□□ 0.35
SMARCA2-227ENST00000634760 A0A0G2JNJ9 132 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 TCRAP04437 139 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 SEC11AP67812 179 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 Q9UFV3 132 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 CD28P10747 220 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 HSD52Q0P140 79 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 SEPSECSQ9HD40 501 aaKnown RBP17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 FBLN7Q53RD9 439 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 MESP1Q9BRJ9 268 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 A0A1B0GV72 72 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 COLCA2A8K830 154 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 C5orf64Q2M2E5 130 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 C15orf32Q32M92 178 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 OR9G4Q8NGQ1 327 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 ORAOV1Q8WV07 137 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 IFI27L1Q96BM0 104 aa17.25■□□□□ 0.35
SMARCA2-227ENST00000634760 B4DSR2 109 aa17.24■□□□□ 0.35
SMARCA2-227ENST00000634760 HOXA3O43365 443 aaPredicted RBP17.24■□□□□ 0.35
SMARCA2-227ENST00000634760 HIST3H2BBQ8N257 126 aa17.24■□□□□ 0.35
SMARCA2-227ENST00000634760 GLMPQ8WWB7 406 aa17.24■□□□□ 0.35
SMARCA2-227ENST00000634760 SLC25A20O43772 301 aa17.24■□□□□ 0.35
SMARCA2-227ENST00000634760 ZCCHC24Q8N2G6 241 aaKnown RBP17.24■□□□□ 0.35
SMARCA2-227ENST00000634760 ETV2O00321 342 aaPredicted RBP17.24■□□□□ 0.35
SMARCA2-227ENST00000634760 TOMM7Q9P0U1 55 aa17.24■□□□□ 0.35
SMARCA2-227ENST00000634760 APOMO95445 188 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 LINC01551Q86U37 167 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 NCOR1P1Q9H4R4 102 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 SCN5AQ14524 2016 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 SNAI2O43623 268 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 Q6ZS92 163 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 PSG3Q16557 428 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 ZNF138P52744 262 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 HIST1H2BLQ99880 126 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 PLNP26678 52 aa17.23■□□□□ 0.35
SMARCA2-227ENST00000634760 TRGV4A0A0C4DH28 118 aa17.22■□□□□ 0.35
SMARCA2-227ENST00000634760 SPATA31B1PQ5VZV4 182 aa17.22■□□□□ 0.35
SMARCA2-227ENST00000634760 CD24P25063 80 aa17.22■□□□□ 0.35
SMARCA2-227ENST00000634760 PRADC1Q9BSG0 188 aa17.22■□□□□ 0.35
SMARCA2-227ENST00000634760 REG4Q9BYZ8 158 aa17.22■□□□□ 0.35
SMARCA2-227ENST00000634760 GFRA4Q9GZZ7 299 aa17.22■□□□□ 0.35
SMARCA2-227ENST00000634760 DOCK6Q96HP0 2047 aa17.22■□□□□ 0.35
SMARCA2-227ENST00000634760 LINC00587B1AMM8 73 aa17.22■□□□□ 0.35
SMARCA2-227ENST00000634760 TNFSF13O75888 250 aa17.22■□□□□ 0.35
SMARCA2-227ENST00000634760 SLC25A16P16260 332 aa17.21■□□□□ 0.35
SMARCA2-227ENST00000634760 MRPL52Q86TS9 123 aaKnown RBP17.21■□□□□ 0.35
SMARCA2-227ENST00000634760 KIR3DL3Q8N743 410 aa17.21■□□□□ 0.35
SMARCA2-227ENST00000634760 IGKV1D-17A0A075B6S4 117 aa17.21■□□□□ 0.35
SMARCA2-227ENST00000634760 PMS2P5A8MQ11 134 aa17.21■□□□□ 0.35
SMARCA2-227ENST00000634760 SCRT1Q9BWW7 348 aa17.21■□□□□ 0.35
SMARCA2-227ENST00000634760 MORN3Q6PF18 240 aaPredicted RBP17.21■□□□□ 0.35
SMARCA2-227ENST00000634760 MRPL27Q9P0M9 148 aaKnown RBP17.21■□□□□ 0.35
SMARCA2-227ENST00000634760 H3BUT2 72 aa17.2■□□□□ 0.34
SMARCA2-227ENST00000634760 SIGLEC9Q9Y336 463 aa17.2■□□□□ 0.34
SMARCA2-227ENST00000634760 IGKV2-40A0A087WW87 121 aaPredicted RBP17.2■□□□□ 0.34
SMARCA2-227ENST00000634760 ADARB2-AS1A8MUL3 147 aa17.2■□□□□ 0.34
SMARCA2-227ENST00000634760 IGKV2D-40P01614 121 aaPredicted RBP17.2■□□□□ 0.34
SMARCA2-227ENST00000634760 CXCL1P09341 107 aa17.2■□□□□ 0.34
SMARCA2-227ENST00000634760 ZNF415Q09FC8 603 aa17.2■□□□□ 0.34
SMARCA2-227ENST00000634760 RPP25LQ8N5L8 163 aaKnown RBP17.2■□□□□ 0.34
SMARCA2-227ENST00000634760 ZNF815PA8K554 130 aa17.19■□□□□ 0.34
SMARCA2-227ENST00000634760 NDUFS8O00217 210 aa17.19■□□□□ 0.34
SMARCA2-227ENST00000634760 PLEKHB2Q96CS7 222 aa17.19■□□□□ 0.34
SMARCA2-227ENST00000634760 PRB3Q04118 309 aaPredicted RBP17.19■□□□□ 0.34
SMARCA2-227ENST00000634760 DMRTA1Q5VZB9 504 aa17.19■□□□□ 0.34
SMARCA2-227ENST00000634760 Q8TCH9 128 aa17.19■□□□□ 0.34
SMARCA2-227ENST00000634760 RPRMLQ8N4K4 120 aa17.19■□□□□ 0.34
SMARCA2-227ENST00000634760 DPH3P1Q9H4G8 78 aa17.19■□□□□ 0.34
SMARCA2-227ENST00000634760 ANAPC10Q9UM13 185 aa17.19■□□□□ 0.34
SMARCA2-227ENST00000634760 LINC00473A8K010 186 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 CRPP02741 224 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 SH2D1AO60880 128 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 OR2K2Q8NGT1 345 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 TRAV3A0A0B4J244 114 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 TMEM238C9JI98 176 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 ZNF688P0C7X2 276 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 FHL1Q13642 323 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms