RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 IAH1Q2TAA2 248 aaPredicted RBP10.5□□□□□ -0.73
PNKP-223ENST00000629179 C16orf54Q6UWD8 224 aa10.5□□□□□ -0.73
PNKP-223ENST00000629179 GRAMD2BQ96HH9 432 aa10.5□□□□□ -0.73
PNKP-223ENST00000629179 SEC22CQ9BRL7 303 aa10.5□□□□□ -0.73
PNKP-223ENST00000629179 NUDT15Q9NV35 164 aa10.5□□□□□ -0.73
PNKP-223ENST00000629179 TBC1D24Q9ULP9 559 aa10.5□□□□□ -0.73
PNKP-223ENST00000629179 STRAPQ9Y3F4 350 aaKnown RBP10.5□□□□□ -0.73
PNKP-223ENST00000629179 IGKV1OR2-108A0A075B7D4 117 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 TRAV2A0A0B4J234 112 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 K7EQG2 157 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 APOC4P55056 127 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 DEFB131AP59861 70 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 OR2F1Q13607 317 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 CASC10Q5T4H9 136 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 ZFAND6Q6FIF0 208 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 ZBTB8BQ8NAP8 495 aaPredicted RBP10.49□□□□□ -0.73
PNKP-223ENST00000629179 GLMPQ8WWB7 406 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 RNF125Q96EQ8 232 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 PBDC1Q9BVG4 233 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 PSENENQ9NZ42 101 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 GSKIPQ9P0R6 139 aa10.49□□□□□ -0.73
PNKP-223ENST00000629179 DNAH7Q8WXX0 4024 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 KIR2DL5BA0A0G2JN68 375 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 KIR2DL5BA0A0G2JPC4 375 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 FAM240BA0A1B0GVZ2 78 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 CCSO14618 274 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 SSSCA1O60232 199 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 SCGB1D2O95969 90 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 H2AFB2P0C5Z0 115 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 DEFB135Q30KP9 77 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 LEMD1Q68G75 181 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 KIR2DL5AQ8N109 375 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 STPG3Q8N7X2 389 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 KIR2DL5BQ8NHK3 375 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 SMIM8Q96KF7 97 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 TRGV9Q99603 122 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 PTTG2Q9NZH5 202 aa10.48□□□□□ -0.73
PNKP-223ENST00000629179 HELTA6NFD8 242 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 UBE2CO00762 179 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 BUB3O43684 328 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 CCNKO75909 580 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 PAX9P55771 341 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 LYZP61626 148 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 ASAH1Q13510 395 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 MZT2BQ6NZ67 158 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 Q6ZWC4 215 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 THAP8Q8NA92 274 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 ZNF431Q8TF32 576 aaPredicted RBP10.47□□□□□ -0.73
PNKP-223ENST00000629179 DCANP1Q8TF63 244 aa10.47□□□□□ -0.73
PNKP-223ENST00000629179 TENM2Q9NT68 2774 aa10.46□□□□□ -0.73
PNKP-223ENST00000629179 SNRPGP15A8MWD9 76 aa10.46□□□□□ -0.73
PNKP-223ENST00000629179 SPRY2O43597 315 aa10.46□□□□□ -0.73
PNKP-223ENST00000629179 FABP1P07148 127 aa10.46□□□□□ -0.73
PNKP-223ENST00000629179 ZNF688P0C7X2 276 aa10.46□□□□□ -0.73
PNKP-223ENST00000629179 EIF2B2P49770 351 aaKnown RBP10.46□□□□□ -0.73
PNKP-223ENST00000629179 ZNF846Q147U1 533 aa10.46□□□□□ -0.73
PNKP-223ENST00000629179 OR8G2PQ6IF36 304 aa10.46□□□□□ -0.73
PNKP-223ENST00000629179 ACOT7LQ6ZUV0 252 aa10.46□□□□□ -0.73
PNKP-223ENST00000629179 C12orf45Q8N5I9 185 aaPredicted RBP10.46□□□□□ -0.73
PNKP-223ENST00000629179 WDR12Q9GZL7 423 aaKnown RBP10.46□□□□□ -0.73
PNKP-223ENST00000629179 CSTL1Q9H114 145 aa10.46□□□□□ -0.73
PNKP-223ENST00000629179 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
PNKP-223ENST00000629179 FAM25EA8MYX2 175 aa10.45□□□□□ -0.74
PNKP-223ENST00000629179 UPK1BO75841 260 aa10.45□□□□□ -0.74
PNKP-223ENST00000629179 MBPP02686 304 aaPredicted RBP10.45□□□□□ -0.74
PNKP-223ENST00000629179 AP2S1P53680 142 aaPredicted RBP10.45□□□□□ -0.74
PNKP-223ENST00000629179 IFITM3Q01628 133 aa10.45□□□□□ -0.74
PNKP-223ENST00000629179 AKR1C1Q04828 323 aa10.45□□□□□ -0.74
PNKP-223ENST00000629179 SIGLEC15Q6ZMC9 328 aa10.45□□□□□ -0.74
PNKP-223ENST00000629179 RNF183Q96D59 192 aa10.45□□□□□ -0.74
PNKP-223ENST00000629179 RAB40CQ96S21 281 aa10.45□□□□□ -0.74
PNKP-223ENST00000629179 RCL1Q9Y2P8 373 aaKnown RBP10.45□□□□□ -0.74
PNKP-223ENST00000629179 SMCO3A2RU48 225 aa10.44□□□□□ -0.74
PNKP-223ENST00000629179 C5orf51A6NDU8 294 aa10.44□□□□□ -0.74
PNKP-223ENST00000629179 KNCNA6PVL3 124 aa10.44□□□□□ -0.74
PNKP-223ENST00000629179 METTL15P1P0C7V9 234 aa10.44□□□□□ -0.74
PNKP-223ENST00000629179 GATA2P23769 480 aaPredicted RBP10.44□□□□□ -0.74
PNKP-223ENST00000629179 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
PNKP-223ENST00000629179 TMEM182Q6ZP80 229 aaPredicted RBP10.44□□□□□ -0.74
PNKP-223ENST00000629179 TMEM144Q7Z5S9 345 aa10.44□□□□□ -0.74
PNKP-223ENST00000629179 TP53TG1Q9Y2A0 90 aa10.44□□□□□ -0.74
PNKP-223ENST00000629179 C7orf66A4D0T2 115 aa10.43□□□□□ -0.74
PNKP-223ENST00000629179 TAS2R30P59541 319 aa10.43□□□□□ -0.74
PNKP-223ENST00000629179 RRAS2P62070 204 aaPredicted RBP10.43□□□□□ -0.74
PNKP-223ENST00000629179 PSMG4Q5JS54 123 aa10.43□□□□□ -0.74
PNKP-223ENST00000629179 STHQ8IWL8 128 aa10.43□□□□□ -0.74
PNKP-223ENST00000629179 PPP1R14BQ96C90 147 aa10.43□□□□□ -0.74
PNKP-223ENST00000629179 NRN1Q9NPD7 142 aa10.43□□□□□ -0.74
PNKP-223ENST00000629179 PFDN2Q9UHV9 154 aa10.43□□□□□ -0.74
PNKP-223ENST00000629179 LSM5Q9Y4Y9 91 aaKnown RBP10.43□□□□□ -0.74
PNKP-223ENST00000629179 TSC22D2O75157 780 aa10.42□□□□□ -0.74
PNKP-223ENST00000629179 NUP62P37198 522 aaPredicted RBP10.42□□□□□ -0.74
PNKP-223ENST00000629179 DLK1P80370 383 aa10.42□□□□□ -0.74
PNKP-223ENST00000629179 GSG1LQ6UXU4 331 aa10.42□□□□□ -0.74
PNKP-223ENST00000629179 BPIFCQ8NFQ6 507 aa10.42□□□□□ -0.74
PNKP-223ENST00000629179 ENKURQ8TC29 256 aa10.42□□□□□ -0.74
PNKP-223ENST00000629179 C2orf50Q96LR7 162 aa10.42□□□□□ -0.74
PNKP-223ENST00000629179 A0A0J9YWU9 116 aa10.41□□□□□ -0.74
PNKP-223ENST00000629179 K7EPK0 472 aa10.41□□□□□ -0.74
PNKP-223ENST00000629179 L7N2F9 121 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms