RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 DEDD2Q8WXF8 326 aa8.83□□□□□ -1
UBR1-212ENST00000627960 SLC25A21Q9BQT8 299 aaPredicted RBP8.83□□□□□ -1
UBR1-212ENST00000627960 SFT2D2O95562 160 aa8.82□□□□□ -1
UBR1-212ENST00000627960 NANOS2P60321 138 aaKnown RBP8.82□□□□□ -1
UBR1-212ENST00000627960 GAMTQ14353 236 aa8.82□□□□□ -1
UBR1-212ENST00000627960 ACTL10Q5JWF8 245 aa8.82□□□□□ -1
UBR1-212ENST00000627960 CCDC190Q86UF4 302 aa8.82□□□□□ -1
UBR1-212ENST00000627960 OR51G1Q8NGK1 321 aa8.82□□□□□ -1
UBR1-212ENST00000627960 RAB40CQ96S21 281 aa8.82□□□□□ -1
UBR1-212ENST00000627960 MFFQ9GZY8 342 aa8.82□□□□□ -1
UBR1-212ENST00000627960 SEPSECSQ9HD40 501 aaKnown RBP8.82□□□□□ -1
UBR1-212ENST00000627960 IGKV1D-37A0A075B6S9 117 aa8.81□□□□□ -1
UBR1-212ENST00000627960 ZFP92A6NM28 416 aa8.81□□□□□ -1
UBR1-212ENST00000627960 FAM90A26D6RGX4 464 aa8.81□□□□□ -1
UBR1-212ENST00000627960 DEFB4AO15263 64 aa8.81□□□□□ -1
UBR1-212ENST00000627960 SLC25A6P12236 298 aa8.81□□□□□ -1
UBR1-212ENST00000627960 VAMP1P23763 118 aa8.81□□□□□ -1
UBR1-212ENST00000627960 PSMG4Q5JS54 123 aa8.81□□□□□ -1
UBR1-212ENST00000627960 SIGLEC15Q6ZMC9 328 aa8.81□□□□□ -1
UBR1-212ENST00000627960 RNF125Q96EQ8 232 aa8.81□□□□□ -1
UBR1-212ENST00000627960 SLC35E1Q96K37 410 aa8.81□□□□□ -1
UBR1-212ENST00000627960 NRN1Q9NPD7 142 aa8.81□□□□□ -1
UBR1-212ENST00000627960 C4BPBP20851 252 aa8.8□□□□□ -1
UBR1-212ENST00000627960 NUP62P37198 522 aaPredicted RBP8.8□□□□□ -1
UBR1-212ENST00000627960 SNRPD3P62318 126 aaKnown RBP8.8□□□□□ -1
UBR1-212ENST00000627960 RAB11AP62491 216 aa8.8□□□□□ -1
UBR1-212ENST00000627960 ZNF90Q03938 601 aa8.8□□□□□ -1
UBR1-212ENST00000627960 PPP1R1AQ13522 171 aa8.8□□□□□ -1
UBR1-212ENST00000627960 OR8G2PQ6IF36 304 aa8.8□□□□□ -1
UBR1-212ENST00000627960 Q8NAQ8 132 aa8.8□□□□□ -1
UBR1-212ENST00000627960 RBM38Q9H0Z9 239 aaKnown RBP8.8□□□□□ -1
UBR1-212ENST00000627960 FBXL17Q9UF56 701 aa8.8□□□□□ -1
UBR1-212ENST00000627960 PFDN2Q9UHV9 154 aa8.8□□□□□ -1
UBR1-212ENST00000627960 TMED3Q9Y3Q3 217 aa8.8□□□□□ -1
UBR1-212ENST00000627960 IGHV4-28A0A0C4DH34 117 aa8.79□□□□□ -1
UBR1-212ENST00000627960 ZNF705EA8MWA4 302 aaPredicted RBP8.79□□□□□ -1
UBR1-212ENST00000627960 ZNF701M0R085 212 aaPredicted RBP8.79□□□□□ -1
UBR1-212ENST00000627960 MED6O75586 246 aa8.79□□□□□ -1
UBR1-212ENST00000627960 FABP1P07148 127 aa8.79□□□□□ -1
UBR1-212ENST00000627960 RBMY1A1P0DJD3 496 aaKnown RBP8.79□□□□□ -1
UBR1-212ENST00000627960 RBMY1CP0DJD4 496 aa8.79□□□□□ -1
UBR1-212ENST00000627960 IAPPP10997 89 aa8.79□□□□□ -1
UBR1-212ENST00000627960 RBMY1FQ15415 496 aaKnown RBP8.79□□□□□ -1
UBR1-212ENST00000627960 CENPSQ8N2Z9 138 aa8.79□□□□□ -1
UBR1-212ENST00000627960 CSNK1G2-AS1Q8NCQ2 148 aa8.79□□□□□ -1
UBR1-212ENST00000627960 PBDC1Q9BVG4 233 aa8.79□□□□□ -1
UBR1-212ENST00000627960 X6R8D5 127 aa8.79□□□□□ -1
UBR1-212ENST00000627960 SYNGR2O43760 224 aa8.78□□□□□ -1
UBR1-212ENST00000627960 HOXB5P09067 269 aa8.78□□□□□ -1
UBR1-212ENST00000627960 MIFP14174 115 aa8.78□□□□□ -1
UBR1-212ENST00000627960 UBE2MP61081 183 aaKnown RBP8.78□□□□□ -1
UBR1-212ENST00000627960 SPANXN2Q5MJ10 180 aa8.78□□□□□ -1
UBR1-212ENST00000627960 GGNBP1Q5YKI7 109 aa8.78□□□□□ -1
UBR1-212ENST00000627960 THAP8Q8NA92 274 aa8.78□□□□□ -1
UBR1-212ENST00000627960 CIB3Q96Q77 187 aaPredicted RBP8.78□□□□□ -1
UBR1-212ENST00000627960 TRGV9Q99603 122 aa8.78□□□□□ -1
UBR1-212ENST00000627960 SRRQ9GZT4 340 aa8.78□□□□□ -1
UBR1-212ENST00000627960 MAGT1Q9H0U3 335 aa8.78□□□□□ -1
UBR1-212ENST00000627960 CLEC5AQ9NY25 188 aa8.78□□□□□ -1
UBR1-212ENST00000627960 PAIP2BQ9ULR5 123 aaKnown RBP8.78□□□□□ -1
UBR1-212ENST00000627960 VPS13DQ5THJ4 4388 aa8.77□□□□□ -1
UBR1-212ENST00000627960 IGKV1OR2-108A0A075B7D4 117 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 NAP1L6A6NFF2 107 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 SNRPGP15A8MWD9 76 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 H3BMM0 161 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 WRBO00258 174 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 NKX2-1P43699 371 aaPredicted RBP8.77□□□□□ -1.01
UBR1-212ENST00000627960 LYZP61626 148 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 RPP30P78346 268 aaKnown RBP8.77□□□□□ -1.01
UBR1-212ENST00000627960 OR2F1Q13607 317 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 C1orf194Q5T5A4 169 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 LGALS9CQ6DKI2 356 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 C2CD4CQ8TF44 421 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 HRH4Q9H3N8 390 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 TBC1D24Q9ULP9 559 aa8.77□□□□□ -1.01
UBR1-212ENST00000627960 ELOA3CA0A087WX78 387 aaPredicted RBP8.76□□□□□ -1.01
UBR1-212ENST00000627960 C9orf170A2RU37 121 aa8.76□□□□□ -1.01
UBR1-212ENST00000627960 PRSS46E5RG02 174 aa8.76□□□□□ -1.01
UBR1-212ENST00000627960 HLA-DRB4P13762 266 aa8.76□□□□□ -1.01
UBR1-212ENST00000627960 ID1P41134 155 aa8.76□□□□□ -1.01
UBR1-212ENST00000627960 INPP1P49441 399 aa8.76□□□□□ -1.01
UBR1-212ENST00000627960 NUTF2P61970 127 aaKnown RBP8.76□□□□□ -1.01
UBR1-212ENST00000627960 BAK1Q16611 211 aa8.76□□□□□ -1.01
UBR1-212ENST00000627960 C1QTNF4Q9BXJ3 329 aa8.76□□□□□ -1.01
UBR1-212ENST00000627960 WDR12Q9GZL7 423 aaKnown RBP8.76□□□□□ -1.01
UBR1-212ENST00000627960 HLA-DRB4X5D2U9 266 aa8.76□□□□□ -1.01
UBR1-212ENST00000627960 C11orf94C9JXX5 98 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 SOCS3O14543 225 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 NDUFB6O95139 128 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 CFDP00746 253 aaPredicted RBP8.75□□□□□ -1.01
UBR1-212ENST00000627960 HLA-DMBP28068 263 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 TCTAP57738 103 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 ID3Q02535 119 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 SPANXN5Q5MJ07 72 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 GDF5OSQ5U4N7 250 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 RPP25LQ8N5L8 163 aaKnown RBP8.75□□□□□ -1.01
UBR1-212ENST00000627960 PPP1R14BQ96C90 147 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 LINC00052Q96N35 136 aa8.75□□□□□ -1.01
UBR1-212ENST00000627960 SAV1Q9H4B6 383 aaPredicted RBP8.75□□□□□ -1.01
UBR1-212ENST00000627960 XCL2Q9UBD3 114 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms