RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 OR51G1Q8NGK1 321 aa9.74□□□□□ -0.85
SOX2-OT-241ENST00000626948 C2CD4CQ8TF44 421 aa9.74□□□□□ -0.85
SOX2-OT-241ENST00000626948 C17orf77Q96MU5 243 aa9.74□□□□□ -0.85
SOX2-OT-241ENST00000626948 PRRT1Q99946 306 aa9.74□□□□□ -0.85
SOX2-OT-241ENST00000626948 WDR12Q9GZL7 423 aaKnown RBP9.74□□□□□ -0.85
SOX2-OT-241ENST00000626948 IGKV1OR2-108A0A075B7D4 117 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 A0A0B4J2A0 478 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 HELTA6NFD8 242 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 IGLL5B9A064 214 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 H3BMM0 161 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 H3BMQ9 156 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 PITX3O75364 302 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 IFNA4P05014 189 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 RD3LP0DJH9 198 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 MIFP14174 115 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 AKR1C4P17516 323 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 GAMTQ14353 236 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 ZNF767PQ75MW2 155 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 DTD1Q8TEA8 209 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 RAB2BQ8WUD1 216 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 TRIM63Q969Q1 353 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 SHPKQ9UHJ6 478 aa9.73□□□□□ -0.85
SOX2-OT-241ENST00000626948 DNAH11Q96DT5 4516 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 SOCS3O14543 225 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 CCR6P51684 374 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 TMBIM6P55061 237 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 KLF9Q13886 244 aaPredicted RBP9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 SMCO1Q147U7 214 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 SIGLEC15Q6ZMC9 328 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 NRN1Q9NPD7 142 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 XCL2Q9UBD3 114 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 TBC1D24Q9ULP9 559 aa9.72□□□□□ -0.85
SOX2-OT-241ENST00000626948 IFNA10P01566 189 aa9.71□□□□□ -0.86
SOX2-OT-241ENST00000626948 TMEM41BQ5BJD5 291 aa9.71□□□□□ -0.86
SOX2-OT-241ENST00000626948 LGI3Q8N145 548 aa9.71□□□□□ -0.86
SOX2-OT-241ENST00000626948 RNF125Q96EQ8 232 aa9.71□□□□□ -0.86
SOX2-OT-241ENST00000626948 U3KQ87 197 aa9.71□□□□□ -0.86
SOX2-OT-241ENST00000626948 V9GYH0 126 aa9.71□□□□□ -0.86
SOX2-OT-241ENST00000626948 IGHV4-4A0A075B6R2 117 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 C11orf94C9JXX5 98 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 PRSS46E5RG02 174 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 HLA-DRB4P13762 266 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 AP2S1P53680 142 aaPredicted RBP9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 ZNF79Q15937 498 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 ZNF705AQ6ZN79 300 aaPredicted RBP9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 ZNF709Q8N972 641 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 NARS2Q96I59 477 aaKnown RBP9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 BCL7BQ9BQE9 202 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 SEPSECSQ9HD40 501 aaKnown RBP9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 MCUBQ9NWR8 336 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 SCP2D1Q9UJQ7 156 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 KCNIP3Q9Y2W7 256 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 HLA-DRB4X5D2U9 266 aa9.7□□□□□ -0.86
SOX2-OT-241ENST00000626948 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 FABP12A6NFH5 140 aa9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 ZNF705FA8MVS1 300 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 SCGB2A1O75556 95 aa9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 ZNF705DP0CH99 300 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 ZNF705BP0CI00 300 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 EIF2B2P49770 351 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 TCTAP57738 103 aa9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 FXYD7P58549 80 aa9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 TMEM182Q6ZP80 229 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 PBDC1Q9BVG4 233 aa9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 RABL2AQ9UBK7 228 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 RSL24D1Q9UHA3 163 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 RABL2BQ9UNT1 228 aa9.69□□□□□ -0.86
SOX2-OT-241ENST00000626948 TRAV10A0A0B4J240 114 aa9.68□□□□□ -0.86
SOX2-OT-241ENST00000626948 F6UB75 175 aa9.68□□□□□ -0.86
SOX2-OT-241ENST00000626948 IAPPP10997 89 aa9.68□□□□□ -0.86
SOX2-OT-241ENST00000626948 NKX2-1P43699 371 aaPredicted RBP9.68□□□□□ -0.86
SOX2-OT-241ENST00000626948 OR2F1Q13607 317 aa9.68□□□□□ -0.86
SOX2-OT-241ENST00000626948 ZFP92A6NM28 416 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 IGKV3-20P01619 116 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 GPX4P36969 197 aaPredicted RBP9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 SNRPD3P62318 126 aaKnown RBP9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 OR8G2PQ6IF36 304 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 NOXA1Q86UR1 476 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 LRTM2Q8N967 370 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 THAP8Q8NA92 274 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 OR1S1Q8NH92 325 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 MCFD2Q8NI22 146 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 C20orf173Q96LM9 149 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 SLC35B3Q9H1N7 401 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 SAV1Q9H4B6 383 aaPredicted RBP9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
SOX2-OT-241ENST00000626948 GATA2P23769 480 aaPredicted RBP9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 LYZP61626 148 aa9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 PPP1R1AQ13522 171 aa9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 TMEM128Q5BJH2 165 aa9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 TMED4Q7Z7H5 227 aa9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 C1orf158Q8N1D5 194 aa9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 SCGB3A2Q96PL1 93 aa9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 TRGV9Q99603 122 aa9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 RNF126Q9BV68 326 aa9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 MAGT1Q9H0U3 335 aa9.66□□□□□ -0.86
SOX2-OT-241ENST00000626948 DEFB131BA0A096LNP1 70 aa9.65□□□□□ -0.86
SOX2-OT-241ENST00000626948 AMBPP02760 352 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms