RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 AWAT1Q58HT5 328 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 C9orf139Q6ZV77 190 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 VN1R17PQ8TDU5 208 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 ZNF503Q96F45 646 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 FOXC2Q99958 501 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 NIPSNAP3BQ9BS92 247 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 LINC00527Q9UJ94 153 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 SCGB2A1O75556 95 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 TOMM40O96008 361 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 FAM167A-AS1Q96KT0 104 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 TXNDC17Q9BRA2 123 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 HIGD1AQ9Y241 93 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 YTHDF2Q9Y5A9 579 aaKnown RBP16.79■□□□□ 0.28
SPAST-204ENST00000621856 PDE6DO43924 150 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 OR10J4P0C629 311 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 IER3P46695 156 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 KLK9Q2XQG4 91 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 OR51G1Q8NGK1 321 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 RPUSD4Q96CM3 377 aaKnown RBP16.79■□□□□ 0.28
SPAST-204ENST00000621856 KLK9Q9UKQ9 250 aa16.79■□□□□ 0.28
SPAST-204ENST00000621856 CELSR1Q9NYQ6 3014 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 CREBBPQ92793 2442 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 SVEP1Q4LDE5 3571 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 FAM74A7A6NL05 159 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 IGHG2P01859 326 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 UBE2L3P68036 154 aaKnown RBP16.78■□□□□ 0.28
SPAST-204ENST00000621856 ZNF674Q2M3X9 581 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 C15orf32Q32M92 178 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 OR5R1Q8NH85 324 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 TVP23CQ96ET8 276 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 MS4A10Q96PG2 267 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 TXN2Q99757 166 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 PAXXQ9BUH6 204 aa16.78■□□□□ 0.28
SPAST-204ENST00000621856 TRBV9A0A0B4J1U6 114 aa16.77■□□□□ 0.28
SPAST-204ENST00000621856 ZNF727A8MUV8 499 aa16.77■□□□□ 0.28
SPAST-204ENST00000621856 F6UZH7 168 aa16.77■□□□□ 0.28
SPAST-204ENST00000621856 F8W735 103 aaPredicted RBP16.77■□□□□ 0.28
SPAST-204ENST00000621856 DNASE2O00115 360 aaPredicted RBP16.77■□□□□ 0.28
SPAST-204ENST00000621856 YPEL3P61236 119 aaPredicted RBP16.77■□□□□ 0.28
SPAST-204ENST00000621856 BLCAPP62952 87 aa16.77■□□□□ 0.28
SPAST-204ENST00000621856 FAM74A3Q4VXF1 159 aa16.77■□□□□ 0.28
SPAST-204ENST00000621856 C19orf54Q5BKX5 351 aa16.77■□□□□ 0.28
SPAST-204ENST00000621856 NECAP1Q8NC96 275 aa16.77■□□□□ 0.28
SPAST-204ENST00000621856 RPS10P5Q9NQ39 176 aa16.77■□□□□ 0.28
SPAST-204ENST00000621856 OR2T8A6NH00 312 aa16.76■□□□□ 0.27
SPAST-204ENST00000621856 IGF1P05019 195 aa16.76■□□□□ 0.27
SPAST-204ENST00000621856 SMIM7Q9BQ49 75 aa16.76■□□□□ 0.27
SPAST-204ENST00000621856 OR51M1Q9H341 326 aa16.76■□□□□ 0.27
SPAST-204ENST00000621856 ARL2-SNX15V9GYD0 113 aa16.76■□□□□ 0.27
SPAST-204ENST00000621856 NUPL2O15504 423 aaKnown RBP16.76■□□□□ 0.27
SPAST-204ENST00000621856 TMEM88Q6PEY1 159 aa16.76■□□□□ 0.27
SPAST-204ENST00000621856 Q8WTZ3 238 aa16.76■□□□□ 0.27
SPAST-204ENST00000621856 C7orf77A4D0Y5 90 aa16.75■□□□□ 0.27
SPAST-204ENST00000621856 IL4P05112 153 aa16.75■□□□□ 0.27
SPAST-204ENST00000621856 PYYP10082 97 aa16.75■□□□□ 0.27
SPAST-204ENST00000621856 FCGR2BP31994 310 aaPredicted RBP16.75■□□□□ 0.27
SPAST-204ENST00000621856 AKR1C3P42330 323 aa16.75■□□□□ 0.27
SPAST-204ENST00000621856 RHEBQ15382 184 aa16.75■□□□□ 0.27
SPAST-204ENST00000621856 Q6YL49 198 aa16.75■□□□□ 0.27
SPAST-204ENST00000621856 ZNF502Q8TBZ5 544 aa16.75■□□□□ 0.27
SPAST-204ENST00000621856 PARLQ9H300 379 aa16.75■□□□□ 0.27
SPAST-204ENST00000621856 GCN1Q92616 2671 aaKnown RBP16.75■□□□□ 0.27
SPAST-204ENST00000621856 CBLN2Q8IUK8 224 aa16.74■□□□□ 0.27
SPAST-204ENST00000621856 STXBP6Q8NFX7 210 aa16.74■□□□□ 0.27
SPAST-204ENST00000621856 SUN5Q8TC36 379 aa16.74■□□□□ 0.27
SPAST-204ENST00000621856 EEF1AKMT3Q96AZ1 226 aa16.74■□□□□ 0.27
SPAST-204ENST00000621856 RNF125Q96EQ8 232 aa16.74■□□□□ 0.27
SPAST-204ENST00000621856 NOL4LQ96MY1 436 aaPredicted RBP16.74■□□□□ 0.27
SPAST-204ENST00000621856 AP4M1O00189 453 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 Q6ZS46 218 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 TEX29Q8N6K0 151 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 ZNF491Q8N8L2 437 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 SLC25A39Q9BZJ4 359 aaPredicted RBP16.73■□□□□ 0.27
SPAST-204ENST00000621856 MRPL27Q9P0M9 148 aaKnown RBP16.73■□□□□ 0.27
SPAST-204ENST00000621856 ZANQ9Y493 2812 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 NBPF19A0A087WUL8 3843 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 WI2-2373I1.2A0A1W2PRP0 233 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 TRGV3P03979 118 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 GPR183P32249 361 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 ATP5G2Q06055 141 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 GAR1Q9NY12 217 aaKnown RBP16.73■□□□□ 0.27
SPAST-204ENST00000621856 VPREB3Q9UKI3 123 aa16.73■□□□□ 0.27
SPAST-204ENST00000621856 SCO2A0A1W2PP80 73 aa16.72■□□□□ 0.27
SPAST-204ENST00000621856 CTSGP08311 255 aa16.72■□□□□ 0.27
SPAST-204ENST00000621856 NPPCP23582 126 aa16.72■□□□□ 0.27
SPAST-204ENST00000621856 LEMD1Q68G75 181 aa16.72■□□□□ 0.27
SPAST-204ENST00000621856 IL17RELQ6ZVW7 336 aa16.72■□□□□ 0.27
SPAST-204ENST00000621856 NAT8Q9UHE5 227 aa16.72■□□□□ 0.27
SPAST-204ENST00000621856 ITPR3Q14573 2671 aa16.72■□□□□ 0.27
SPAST-204ENST00000621856 A0A1W2PRE2 83 aa16.71■□□□□ 0.27
SPAST-204ENST00000621856 FAM223BA6NKX1 122 aa16.71■□□□□ 0.27
SPAST-204ENST00000621856 NDUFB4O95168 129 aa16.71■□□□□ 0.27
SPAST-204ENST00000621856 OR2C1O95371 312 aa16.71■□□□□ 0.27
SPAST-204ENST00000621856 PNRC1Q12796 327 aaPredicted RBP16.71■□□□□ 0.27
SPAST-204ENST00000621856 TMEM241Q24JQ0 296 aa16.71■□□□□ 0.27
SPAST-204ENST00000621856 FAM223AQ8IWN6 122 aa16.71■□□□□ 0.27
SPAST-204ENST00000621856 FXYD5Q96DB9 178 aa16.71■□□□□ 0.27
SPAST-204ENST00000621856 CHRDL1Q9BU40 450 aa16.71■□□□□ 0.27
SPAST-204ENST00000621856 SDF2L1Q9HCN8 221 aa16.71■□□□□ 0.27
SPAST-204ENST00000621856 PDZD2O15018 2839 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms