RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 PPIAL4AQ9Y536 164 aa2.58□□□□□ -2
U1.39-201ENST00000621562 MUC4Q99102 2169 aa2.58□□□□□ -2
U1.39-201ENST00000621562 ACACBO00763 2458 aa2.58□□□□□ -2
U1.39-201ENST00000621562 LRRK2Q5S007 2527 aa2.58□□□□□ -2
U1.39-201ENST00000621562 ZFYVE26Q68DK2 2539 aa2.58□□□□□ -2
U1.39-201ENST00000621562 CREBBPQ92793 2442 aa2.57□□□□□ -2
U1.39-201ENST00000621562 IGHV2-26A0A0B4J1V2 119 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TRAV34A0A0B4J273 112 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TRBV6-1A0A0K0K1D8 114 aa2.57□□□□□ -2
U1.39-201ENST00000621562 A0A1W2PS18 150 aa2.57□□□□□ -2
U1.39-201ENST00000621562 ZNF705GA8MUZ8 300 aaPredicted RBP2.57□□□□□ -2
U1.39-201ENST00000621562 NPIPB6E9PJ23 425 aa2.57□□□□□ -2
U1.39-201ENST00000621562 I3L2K1 104 aa2.57□□□□□ -2
U1.39-201ENST00000621562 FCN1O00602 326 aa2.57□□□□□ -2
U1.39-201ENST00000621562 MRPS12O15235 138 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 COX7A2P2O60397 106 aa2.57□□□□□ -2
U1.39-201ENST00000621562 ZNF324O75467 553 aaPredicted RBP2.57□□□□□ -2
U1.39-201ENST00000621562 SCGB1D1O95968 90 aa2.57□□□□□ -2
U1.39-201ENST00000621562 PLAUP00749 431 aa2.57□□□□□ -2
U1.39-201ENST00000621562 CA1P00915 261 aaPredicted RBP2.57□□□□□ -2
U1.39-201ENST00000621562 LTAP01374 205 aa2.57□□□□□ -2
U1.39-201ENST00000621562 IGLV2-11P01706 119 aa2.57□□□□□ -2
U1.39-201ENST00000621562 IGHV3-48P01763 117 aa2.57□□□□□ -2
U1.39-201ENST00000621562 HLA-DQA1P01909 254 aa2.57□□□□□ -2
U1.39-201ENST00000621562 APOHP02749 345 aaPredicted RBP2.57□□□□□ -2
U1.39-201ENST00000621562 RBP4P02753 201 aa2.57□□□□□ -2
U1.39-201ENST00000621562 IRF2P14316 349 aa2.57□□□□□ -2
U1.39-201ENST00000621562 SRIP30626 198 aa2.57□□□□□ -2
U1.39-201ENST00000621562 NBL1P41271 181 aa2.57□□□□□ -2
U1.39-201ENST00000621562 RPL27AP46776 148 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 DLX1P56177 255 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TCL1AP56279 114 aa2.57□□□□□ -2
U1.39-201ENST00000621562 SELENOVP59797 346 aa2.57□□□□□ -2
U1.39-201ENST00000621562 BPIFB3P59826 476 aa2.57□□□□□ -2
U1.39-201ENST00000621562 RANP62826 216 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 SUMO1P63165 101 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 GNG5P63218 68 aa2.57□□□□□ -2
U1.39-201ENST00000621562 KLF5Q13887 457 aaPredicted RBP2.57□□□□□ -2
U1.39-201ENST00000621562 TBR1Q16650 682 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TMEM183BQ1AE95 376 aa2.57□□□□□ -2
U1.39-201ENST00000621562 KIAA1644Q3SXP7 199 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TIGITQ495A1 244 aa2.57□□□□□ -2
U1.39-201ENST00000621562 CT83Q5H943 113 aa2.57□□□□□ -2
U1.39-201ENST00000621562 C10orf113Q5VZT2 155 aa2.57□□□□□ -2
U1.39-201ENST00000621562 HCP5Q6MZN7 132 aa2.57□□□□□ -2
U1.39-201ENST00000621562 MRPL54Q6P161 138 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 RASL11AQ6T310 242 aa2.57□□□□□ -2
U1.39-201ENST00000621562 LINC00322Q6ZN03 302 aaPredicted RBP2.57□□□□□ -2
U1.39-201ENST00000621562 SSX8Q7RTT4 187 aa2.57□□□□□ -2
U1.39-201ENST00000621562 Q86TA4 180 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TGIF2LXQ8IUE1 241 aa2.57□□□□□ -2
U1.39-201ENST00000621562 SPACA3Q8IXA5 215 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TEX45Q8NA69 505 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TMEM116Q8NCL8 245 aa2.57□□□□□ -2
U1.39-201ENST00000621562 NUP35Q8NFH5 326 aa2.57□□□□□ -2
U1.39-201ENST00000621562 NUDT10Q8NFP7 164 aa2.57□□□□□ -2
U1.39-201ENST00000621562 OR1L4Q8NGR5 311 aa2.57□□□□□ -2
U1.39-201ENST00000621562 OR10X1Q8NGY0 326 aa2.57□□□□□ -2
U1.39-201ENST00000621562 VSTM2AQ8TAG5 236 aa2.57□□□□□ -2
U1.39-201ENST00000621562 CFHR4Q92496 578 aa2.57□□□□□ -2
U1.39-201ENST00000621562 H1FXQ92522 213 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 TNFRSF14Q92956 283 aa2.57□□□□□ -2
U1.39-201ENST00000621562 FLYWCH2Q96CP2 140 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 NUDT11Q96G61 164 aa2.57□□□□□ -2
U1.39-201ENST00000621562 GRAMD2BQ96HH9 432 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TBX15Q96SF7 602 aa2.57□□□□□ -2
U1.39-201ENST00000621562 SSBP3Q9BWW4 388 aaPredicted RBP2.57□□□□□ -2
U1.39-201ENST00000621562 NRN1Q9NPD7 142 aa2.57□□□□□ -2
U1.39-201ENST00000621562 MRPL27Q9P0M9 148 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 SIGLEC9Q9Y336 463 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TBL2Q9Y4P3 447 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 AMMECR1Q9Y4X0 333 aaPredicted RBP2.57□□□□□ -2
U1.39-201ENST00000621562 F11RQ9Y624 299 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 CR1P17927 2039 aa2.57□□□□□ -2
U1.39-201ENST00000621562 UTP20O75691 2785 aaKnown RBP2.57□□□□□ -2
U1.39-201ENST00000621562 CRYBG3Q68DQ2 2970 aa2.57□□□□□ -2
U1.39-201ENST00000621562 PTPN13Q12923 2485 aa2.57□□□□□ -2
U1.39-201ENST00000621562 TLN2Q9Y4G6 2542 aa2.57□□□□□ -2
U1.39-201ENST00000621562 MXRA5Q9NR99 2828 aa2.56□□□□□ -2
U1.39-201ENST00000621562 NBPF19A0A087WUL8 3843 aa2.56□□□□□ -2
U1.39-201ENST00000621562 IGHV3-72A0A0B4J1Y9 119 aa2.56□□□□□ -2
U1.39-201ENST00000621562 IGHV1-3A0A0C4DH29 117 aa2.56□□□□□ -2
U1.39-201ENST00000621562 IGHV1-69-2A0A0G2JMI3 117 aa2.56□□□□□ -2
U1.39-201ENST00000621562 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.56□□□□□ -2
U1.39-201ENST00000621562 C2orf70A6NJV1 201 aa2.56□□□□□ -2
U1.39-201ENST00000621562 ODF3BA8MYP8 253 aa2.56□□□□□ -2
U1.39-201ENST00000621562 LYNX1G3V0Z9 82 aa2.56□□□□□ -2
U1.39-201ENST00000621562 H3BRN7 92 aa2.56□□□□□ -2
U1.39-201ENST00000621562 BUB1B-PAK6H3BSN5 160 aa2.56□□□□□ -2
U1.39-201ENST00000621562 K7EIM0 57 aa2.56□□□□□ -2
U1.39-201ENST00000621562 PRRG2O14669 202 aa2.56□□□□□ -2
U1.39-201ENST00000621562 KLK10O43240 276 aa2.56□□□□□ -2
U1.39-201ENST00000621562 NDUFB3O43676 98 aa2.56□□□□□ -2
U1.39-201ENST00000621562 SPINK4O60575 86 aa2.56□□□□□ -2
U1.39-201ENST00000621562 ZNF253O75346 499 aa2.56□□□□□ -2
U1.39-201ENST00000621562 NDUFA3O95167 84 aa2.56□□□□□ -2
U1.39-201ENST00000621562 TOMM40O96008 361 aa2.56□□□□□ -2
U1.39-201ENST00000621562 IGKV1-17P01599 117 aa2.56□□□□□ -2
U1.39-201ENST00000621562 C3orf79P0CE67 100 aa2.56□□□□□ -2
U1.39-201ENST00000621562 IGLC1P0CG04 106 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms