RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 OR7C2O60412 319 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 PTTG1IPP53801 180 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 PVRIGQ6DKI7 326 aa16.97■□□□□ 0.31
LIME1-210ENST00000621325 TCRBV4S1A1TA0A5B7 111 aa16.96■□□□□ 0.31
LIME1-210ENST00000621325 SCGB1D1O95968 90 aa16.96■□□□□ 0.31
LIME1-210ENST00000621325 DYNAPQ8N1N2 210 aa16.96■□□□□ 0.31
LIME1-210ENST00000621325 THAP8Q8NA92 274 aa16.96■□□□□ 0.31
LIME1-210ENST00000621325 XKRY2A2RUG3 117 aa16.96■□□□□ 0.3
LIME1-210ENST00000621325 MOSP00540 346 aa16.96■□□□□ 0.3
LIME1-210ENST00000621325 CRYGCP07315 174 aa16.96■□□□□ 0.3
LIME1-210ENST00000621325 UHRF2Q96PU4 802 aa16.96■□□□□ 0.3
LIME1-210ENST00000621325 TXNDC17Q9BRA2 123 aa16.96■□□□□ 0.3
LIME1-210ENST00000621325 C20orf202A1L168 122 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 H7BYZ3 331 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 PATE2Q6UY27 113 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 MRPL41Q8IXM3 137 aaKnown RBP16.95■□□□□ 0.3
LIME1-210ENST00000621325 RNF5Q99942 180 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 RPH3ALQ9UNE2 315 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 SELENOTP62341 195 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 CLEC12BQ2HXU8 276 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 NUDT10Q8NFP7 164 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 FAM167A-AS1Q96KT0 104 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 C19orf24Q9BVV8 132 aa16.95■□□□□ 0.3
LIME1-210ENST00000621325 PFN1P07737 140 aaKnown RBP16.94■□□□□ 0.3
LIME1-210ENST00000621325 CEACAM3P40198 252 aa16.94■□□□□ 0.3
LIME1-210ENST00000621325 SLC25A2Q9BXI2 301 aa16.94■□□□□ 0.3
LIME1-210ENST00000621325 BPESC1Q9GZL8 116 aa16.94■□□□□ 0.3
LIME1-210ENST00000621325 F11RQ9Y624 299 aaKnown RBP16.94■□□□□ 0.3
LIME1-210ENST00000621325 C8orf88P0DMB2 117 aa16.94■□□□□ 0.3
LIME1-210ENST00000621325 TMEM8BA6NDV4 472 aa16.93■□□□□ 0.3
LIME1-210ENST00000621325 PQLC2Q6ZP29 291 aa16.93■□□□□ 0.3
LIME1-210ENST00000621325 EAF1Q96JC9 268 aaPredicted RBP16.93■□□□□ 0.3
LIME1-210ENST00000621325 TMEM167BQ9NRX6 74 aa16.93■□□□□ 0.3
LIME1-210ENST00000621325 TNFRSF19Q9NS68 423 aa16.93■□□□□ 0.3
LIME1-210ENST00000621325 CACNA1BQ00975 2339 aa16.93■□□□□ 0.3
LIME1-210ENST00000621325 NBR2O15453 112 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 COX7A2P2O60397 106 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 CNIH1O95406 144 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 HOXB4P17483 251 aaPredicted RBP16.92■□□□□ 0.3
LIME1-210ENST00000621325 TAS2R45P59539 299 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 PAX2Q02962 417 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 HES1Q14469 280 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 TRBV24-1A0A075B6N3 115 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 HSBP1L1C9JCN9 74 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 K7EP13 123 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 GALR1P47211 349 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 C1orf122Q6ZSJ8 110 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 FAM103A1Q9BTL3 118 aaKnown RBP16.92■□□□□ 0.3
LIME1-210ENST00000621325 FLNCQ14315 2725 aa16.92■□□□□ 0.3
LIME1-210ENST00000621325 C10orf113Q5VZT2 155 aa16.91■□□□□ 0.3
LIME1-210ENST00000621325 MRPL52Q86TS9 123 aaKnown RBP16.91■□□□□ 0.3
LIME1-210ENST00000621325 ZNF355PQ9NSJ1 428 aa16.91■□□□□ 0.3
LIME1-210ENST00000621325 GGTLC3B5MD39 225 aa16.91■□□□□ 0.3
LIME1-210ENST00000621325 TMEM238C9JI98 176 aa16.91■□□□□ 0.3
LIME1-210ENST00000621325 OR5AU1Q8NGC0 362 aa16.91■□□□□ 0.3
LIME1-210ENST00000621325 OCC1Q8TAD7 63 aa16.91■□□□□ 0.3
LIME1-210ENST00000621325 MRPL32Q9BYC8 188 aaKnown RBP16.91■□□□□ 0.3
LIME1-210ENST00000621325 SIRPDQ9H106 197 aa16.91■□□□□ 0.3
LIME1-210ENST00000621325 PYYP10082 97 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 KIR3DL3Q8N743 410 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 C11orf52Q96A22 123 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 OVOL3O00110 214 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 CRYBB3P26998 211 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 LMO4P61968 165 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 COL5A1-AS1Q5SY13 56 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 SMIM15Q7Z3B0 74 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 GBGT1Q8N5D6 347 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 TMEM116Q8NCL8 245 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 ANAPC16Q96DE5 110 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 WNT10AQ9GZT5 417 aa16.9■□□□□ 0.3
LIME1-210ENST00000621325 ORM2P19652 201 aa16.89■□□□□ 0.29
LIME1-210ENST00000621325 NPBQ8NG41 125 aa16.89■□□□□ 0.29
LIME1-210ENST00000621325 OR5B12Q96R08 314 aa16.89■□□□□ 0.29
LIME1-210ENST00000621325 ALKBH7Q9BT30 221 aaPredicted RBP16.89■□□□□ 0.29
LIME1-210ENST00000621325 USP9XQ93008 2570 aaPredicted RBP16.89■□□□□ 0.29
LIME1-210ENST00000621325 NDUFA3O95167 84 aa16.89■□□□□ 0.29
LIME1-210ENST00000621325 TDRG1Q3Y452 100 aa16.89■□□□□ 0.29
LIME1-210ENST00000621325 COA6Q5JTJ3 125 aaKnown RBP16.89■□□□□ 0.29
LIME1-210ENST00000621325 NDUFB8O95169 186 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 IGHV4-39P01824 125 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 UBE2L3P68036 154 aaKnown RBP16.88■□□□□ 0.29
LIME1-210ENST00000621325 OR1L4Q8NGR5 311 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 TMEM18Q96B42 140 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 PYGO2Q9BRQ0 406 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 NAGKQ9UJ70 344 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 ZFYVE26Q68DK2 2539 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 IGHV2-70DA0A0C4DH43 119 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 M0QZ24 198 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 SUMO1P63165 101 aaKnown RBP16.88■□□□□ 0.29
LIME1-210ENST00000621325 FXYD3Q14802 87 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 LINC00305Q7Z4B0 112 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 OR1B1Q8NGR6 318 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 RNF2Q99496 336 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 TRGV9Q99603 122 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 MIEN1Q9BRT3 115 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 ARL2-SNX15V9GYD0 113 aa16.88■□□□□ 0.29
LIME1-210ENST00000621325 ZNF705FA8MVS1 300 aaPredicted RBP16.87■□□□□ 0.29
LIME1-210ENST00000621325 K7EN84 100 aa16.87■□□□□ 0.29
LIME1-210ENST00000621325 CORTO00230 105 aa16.87■□□□□ 0.29
LIME1-210ENST00000621325 ZNF705DP0CH99 300 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms