RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 C2orf70A6NJV1 201 aa14.99□□□□□ -0.01
UPF3A-211ENST00000618700 YIF1AO95070 293 aa14.99□□□□□ -0.01
UPF3A-211ENST00000618700 CSN3P07498 182 aa14.99□□□□□ -0.01
UPF3A-211ENST00000618700 PSG1P11464 419 aa14.99□□□□□ -0.01
UPF3A-211ENST00000618700 IGLL1P15814 213 aa14.99□□□□□ -0.01
UPF3A-211ENST00000618700 TEPPQ6URK8 271 aa14.99□□□□□ -0.01
UPF3A-211ENST00000618700 TCTE3Q8IZS6 198 aa14.99□□□□□ -0.01
UPF3A-211ENST00000618700 Q8WTZ3 238 aa14.99□□□□□ -0.01
UPF3A-211ENST00000618700 DAZ1Q9NQZ3 744 aaKnown RBP14.99□□□□□ -0.01
UPF3A-211ENST00000618700 SIGLEC8Q9NYZ4 499 aa14.99□□□□□ -0.01
UPF3A-211ENST00000618700 IGHV3OR16-8A0A075B7F1 116 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 UBE2L5PA0A1B0GUS4 154 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 SEC14L6B5MCN3 397 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 K7EMT4 169 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 FABP1P07148 127 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 RD3LP0DJH9 198 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 EDN2P20800 178 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 CLINT1Q14677 625 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 ADAMTSL5Q6ZMM2 481 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 ZNF546Q86UE3 836 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 C20orf24Q9BUV8 137 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 ELOVL1Q9BW60 279 aa14.98□□□□□ -0.01
UPF3A-211ENST00000618700 TM4SF20Q53R12 229 aa14.97□□□□□ -0.01
UPF3A-211ENST00000618700 C9orf66Q5T8R8 295 aa14.97□□□□□ -0.01
UPF3A-211ENST00000618700 CYP2G1PQ6ZSU1 146 aa14.97□□□□□ -0.01
UPF3A-211ENST00000618700 AKAP14Q86UN6 197 aa14.97□□□□□ -0.01
UPF3A-211ENST00000618700 MGST2Q99735 147 aa14.97□□□□□ -0.01
UPF3A-211ENST00000618700 ATP5SQ99766 215 aa14.97□□□□□ -0.01
UPF3A-211ENST00000618700 WI2-2373I1.2A0A1W2PRP0 233 aa14.96□□□□□ -0.01
UPF3A-211ENST00000618700 IL4P05112 153 aa14.96□□□□□ -0.01
UPF3A-211ENST00000618700 C8orf88P0DMB2 117 aa14.96□□□□□ -0.01
UPF3A-211ENST00000618700 NUP62P37198 522 aaPredicted RBP14.96□□□□□ -0.01
UPF3A-211ENST00000618700 TMEM182Q6ZP80 229 aaPredicted RBP14.96□□□□□ -0.01
UPF3A-211ENST00000618700 INO80EQ8NBZ0 244 aaPredicted RBP14.96□□□□□ -0.01
UPF3A-211ENST00000618700 OR11H4Q8NGC9 324 aa14.96□□□□□ -0.01
UPF3A-211ENST00000618700 OR51G1Q8NGK1 321 aa14.96□□□□□ -0.01
UPF3A-211ENST00000618700 MARC2Q969Z3 335 aa14.96□□□□□ -0.01
UPF3A-211ENST00000618700 GINS3Q9BRX5 216 aa14.96□□□□□ -0.01
UPF3A-211ENST00000618700 GPR61Q9BZJ8 451 aa14.96□□□□□ -0.01
UPF3A-211ENST00000618700 NBEAL1Q6ZS30 2694 aa14.96□□□□□ -0.02
UPF3A-211ENST00000618700 AGPAT2O15120 278 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 ZNF207O43670 478 aaKnown RBP14.95□□□□□ -0.02
UPF3A-211ENST00000618700 SAP30O75446 220 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 DFFBO76075 338 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 FOLR2P14207 255 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 CBLN1P23435 193 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 INSL3P51460 131 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 SELENOTP62341 195 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 OR2F1Q13607 317 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 USF2Q15853 346 aaPredicted RBP14.95□□□□□ -0.02
UPF3A-211ENST00000618700 BTNL8Q6UX41 500 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 RNF125Q96EQ8 232 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 SMIM3Q9BZL3 60 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 WFDC1Q9HC57 220 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 FBXL17Q9UF56 701 aa14.95□□□□□ -0.02
UPF3A-211ENST00000618700 HMSDA8MTL9 139 aa14.94□□□□□ -0.02
UPF3A-211ENST00000618700 CFDP00746 253 aaPredicted RBP14.94□□□□□ -0.02
UPF3A-211ENST00000618700 FGF7P21781 194 aa14.94□□□□□ -0.02
UPF3A-211ENST00000618700 GATA2P23769 480 aaPredicted RBP14.94□□□□□ -0.02
UPF3A-211ENST00000618700 SAMD5Q5TGI4 173 aa14.94□□□□□ -0.02
UPF3A-211ENST00000618700 BPIFCQ8NFQ6 507 aa14.94□□□□□ -0.02
UPF3A-211ENST00000618700 GGTLC1Q9BX51 225 aa14.94□□□□□ -0.02
UPF3A-211ENST00000618700 MRPL27Q9P0M9 148 aaKnown RBP14.94□□□□□ -0.02
UPF3A-211ENST00000618700 SLC45A2Q9UMX9 530 aa14.94□□□□□ -0.02
UPF3A-211ENST00000618700 DNAH3Q8TD57 4116 aa14.94□□□□□ -0.02
UPF3A-211ENST00000618700 IGHV7-4-1A0A0J9YVY3 117 aa14.93□□□□□ -0.02
UPF3A-211ENST00000618700 ARPC5O15511 151 aa14.93□□□□□ -0.02
UPF3A-211ENST00000618700 MPDU1O75352 247 aa14.93□□□□□ -0.02
UPF3A-211ENST00000618700 CAMLGP49069 296 aa14.93□□□□□ -0.02
UPF3A-211ENST00000618700 CD300CQ08708 224 aa14.93□□□□□ -0.02
UPF3A-211ENST00000618700 WDR61Q9GZS3 305 aaKnown RBP14.93□□□□□ -0.02
UPF3A-211ENST00000618700 G3V4G9 280 aa14.92□□□□□ -0.02
UPF3A-211ENST00000618700 IGLV1-51P01701 117 aa14.92□□□□□ -0.02
UPF3A-211ENST00000618700 CRYBB3P26998 211 aa14.92□□□□□ -0.02
UPF3A-211ENST00000618700 RAB31Q13636 194 aa14.92□□□□□ -0.02
UPF3A-211ENST00000618700 METTL26Q96S19 204 aa14.92□□□□□ -0.02
UPF3A-211ENST00000618700 PARD6GQ9BYG4 376 aaPredicted RBP14.92□□□□□ -0.02
UPF3A-211ENST00000618700 MFFQ9GZY8 342 aa14.92□□□□□ -0.02
UPF3A-211ENST00000618700 MLXQ9UH92 298 aa14.92□□□□□ -0.02
UPF3A-211ENST00000618700 SMPXQ9UHP9 88 aa14.92□□□□□ -0.02
UPF3A-211ENST00000618700 NOTCH1P46531 2555 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 C1QBP02746 253 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 LINC00869P0C866 280 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 NPPCP23582 126 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 AP2S1P53680 142 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-211ENST00000618700 PLP1P60201 277 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 LYZP61626 148 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 ZNF345Q14585 488 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 OPCMLQ14982 345 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 NEURL2Q9BR09 285 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 PBDC1Q9BVG4 233 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 NPCDR1Q9BY65 106 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 U3KQE9 123 aa14.91□□□□□ -0.02
UPF3A-211ENST00000618700 CHEK1O14757 476 aa14.9□□□□□ -0.02
UPF3A-211ENST00000618700 APOHP02749 345 aaPredicted RBP14.9□□□□□ -0.02
UPF3A-211ENST00000618700 HNRNPCP07910 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
UPF3A-211ENST00000618700 RPL29P47914 159 aaKnown RBP14.9□□□□□ -0.02
UPF3A-211ENST00000618700 TNP2Q05952 138 aa14.9□□□□□ -0.02
UPF3A-211ENST00000618700 DYNLRB2Q8TF09 96 aa14.9□□□□□ -0.02
UPF3A-211ENST00000618700 VSIRQ9H7M9 311 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms