RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 TOMM40O96008 361 aa18.52■□□□□ 0.56
PMS1-220ENST00000618056 C1QBP02746 253 aa18.52■□□□□ 0.56
PMS1-220ENST00000618056 SLC35E1Q96K37 410 aa18.52■□□□□ 0.56
PMS1-220ENST00000618056 CITED4Q96RK1 184 aa18.52■□□□□ 0.56
PMS1-220ENST00000618056 NKX2-1P43699 371 aaPredicted RBP18.52■□□□□ 0.55
PMS1-220ENST00000618056 UBQLN2Q9UHD9 624 aa18.52■□□□□ 0.55
PMS1-220ENST00000618056 DFFBO76075 338 aa18.51■□□□□ 0.55
PMS1-220ENST00000618056 RD3LP0DJH9 198 aa18.51■□□□□ 0.55
PMS1-220ENST00000618056 PAFAH1B2P68402 229 aa18.51■□□□□ 0.55
PMS1-220ENST00000618056 NARS2Q96I59 477 aaKnown RBP18.51■□□□□ 0.55
PMS1-220ENST00000618056 MGAT4CQ9UBM8 478 aa18.51■□□□□ 0.55
PMS1-220ENST00000618056 U3KQE9 123 aa18.51■□□□□ 0.55
PMS1-220ENST00000618056 IGHV3-66A0A0C4DH42 116 aa18.5■□□□□ 0.55
PMS1-220ENST00000618056 PRSS46E5RG02 174 aa18.5■□□□□ 0.55
PMS1-220ENST00000618056 CXCL3P19876 107 aa18.5■□□□□ 0.55
PMS1-220ENST00000618056 CMC4P56277 68 aaPredicted RBP18.5■□□□□ 0.55
PMS1-220ENST00000618056 ZNF431Q8TF32 576 aaPredicted RBP18.5■□□□□ 0.55
PMS1-220ENST00000618056 GGTLC1Q9BX51 225 aa18.5■□□□□ 0.55
PMS1-220ENST00000618056 LOC102724200A0A096LPH7 203 aaPredicted RBP18.49■□□□□ 0.55
PMS1-220ENST00000618056 TRAV2A0A0B4J234 112 aa18.49■□□□□ 0.55
PMS1-220ENST00000618056 IL4P05112 153 aa18.49■□□□□ 0.55
PMS1-220ENST00000618056 POLR2GP62487 172 aaKnown RBP eCLIP18.49■□□□□ 0.55
PMS1-220ENST00000618056 IAH1Q2TAA2 248 aaPredicted RBP18.49■□□□□ 0.55
PMS1-220ENST00000618056 SPANXN5Q5MJ07 72 aa18.49■□□□□ 0.55
PMS1-220ENST00000618056 PAIP2BQ9ULR5 123 aaKnown RBP18.49■□□□□ 0.55
PMS1-220ENST00000618056 IGKV3-7A0A075B6H7 116 aa18.48■□□□□ 0.55
PMS1-220ENST00000618056 IGKV1D-37A0A075B6S9 117 aa18.48■□□□□ 0.55
PMS1-220ENST00000618056 PSG1P11464 419 aa18.48■□□□□ 0.55
PMS1-220ENST00000618056 P2RY1P47900 373 aa18.48■□□□□ 0.55
PMS1-220ENST00000618056 GBGT1Q8N5D6 347 aa18.48■□□□□ 0.55
PMS1-220ENST00000618056 MS4A6AQ9H2W1 248 aa18.48■□□□□ 0.55
PMS1-220ENST00000618056 STRAPQ9Y3F4 350 aaKnown RBP18.48■□□□□ 0.55
PMS1-220ENST00000618056 ZFP92A6NM28 416 aa18.47■□□□□ 0.55
PMS1-220ENST00000618056 TFPI2P48307 235 aa18.47■□□□□ 0.55
PMS1-220ENST00000618056 USF2Q15853 346 aaPredicted RBP18.47■□□□□ 0.55
PMS1-220ENST00000618056 ZBTB8BQ8NAP8 495 aaPredicted RBP18.47■□□□□ 0.55
PMS1-220ENST00000618056 GRAMD2BQ96HH9 432 aa18.47■□□□□ 0.55
PMS1-220ENST00000618056 H3BP45 60 aa18.46■□□□□ 0.55
PMS1-220ENST00000618056 OR51G1Q8NGK1 321 aa18.46■□□□□ 0.55
PMS1-220ENST00000618056 SMIM8Q96KF7 97 aa18.46■□□□□ 0.55
PMS1-220ENST00000618056 SMLR1H3BR10 107 aa18.46■□□□□ 0.54
PMS1-220ENST00000618056 SSSCA1O60232 199 aa18.46■□□□□ 0.54
PMS1-220ENST00000618056 THAP8Q8NA92 274 aa18.46■□□□□ 0.54
PMS1-220ENST00000618056 RNF125Q96EQ8 232 aa18.46■□□□□ 0.54
PMS1-220ENST00000618056 HYLS1Q96M11 299 aa18.46■□□□□ 0.54
PMS1-220ENST00000618056 TRGV9Q99603 122 aa18.46■□□□□ 0.54
PMS1-220ENST00000618056 DNASE2O00115 360 aaPredicted RBP18.45■□□□□ 0.54
PMS1-220ENST00000618056 FABP1P07148 127 aa18.45■□□□□ 0.54
PMS1-220ENST00000618056 GIPP09681 153 aaPredicted RBP18.45■□□□□ 0.54
PMS1-220ENST00000618056 RPL11P62913 178 aaKnown RBP18.45■□□□□ 0.54
PMS1-220ENST00000618056 ZNF90Q03938 601 aa18.45■□□□□ 0.54
PMS1-220ENST00000618056 C16orf54Q6UWD8 224 aa18.45■□□□□ 0.54
PMS1-220ENST00000618056 C12orf45Q8N5I9 185 aaPredicted RBP18.45■□□□□ 0.54
PMS1-220ENST00000618056 MAP6D1Q9H9H5 199 aa18.45■□□□□ 0.54
PMS1-220ENST00000618056 PSENENQ9NZ42 101 aa18.45■□□□□ 0.54
PMS1-220ENST00000618056 IGKV1OR2-108A0A075B7D4 117 aa18.44■□□□□ 0.54
PMS1-220ENST00000618056 GLMPQ8WWB7 406 aa18.44■□□□□ 0.54
PMS1-220ENST00000618056 RAB40CQ96S21 281 aa18.44■□□□□ 0.54
PMS1-220ENST00000618056 EDA2RQ9HAV5 297 aa18.44■□□□□ 0.54
PMS1-220ENST00000618056 RETNQ9HD89 108 aa18.44■□□□□ 0.54
PMS1-220ENST00000618056 GSKIPQ9P0R6 139 aa18.44■□□□□ 0.54
PMS1-220ENST00000618056 RABAC1Q9UI14 185 aa18.44■□□□□ 0.54
PMS1-220ENST00000618056 GOSR2O14653 212 aa18.43■□□□□ 0.54
PMS1-220ENST00000618056 PAX9P55771 341 aa18.43■□□□□ 0.54
PMS1-220ENST00000618056 TAS2R30P59541 319 aa18.43■□□□□ 0.54
PMS1-220ENST00000618056 AGRNO00468 2067 aa18.43■□□□□ 0.54
PMS1-220ENST00000618056 KIR2DL5BA0A0G2JN68 375 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 KIR2DL5BA0A0G2JPC4 375 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 HELTA6NFD8 242 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 BUB3O43684 328 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 SCGB1D2O95969 90 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 APOC4P55056 127 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 RAP2BP61225 183 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 OR8G2PQ6IF36 304 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 WFDC3Q8IUB2 231 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 APRG1Q8IVJ8 170 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 KIR2DL5AQ8N109 375 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 KIR2DL5BQ8NHK3 375 aa18.42■□□□□ 0.54
PMS1-220ENST00000618056 RCL1Q9Y2P8 373 aaKnown RBP18.42■□□□□ 0.54
PMS1-220ENST00000618056 KMT2CQ8NEZ4 4911 aaKnown RBP18.41■□□□□ 0.54
PMS1-220ENST00000618056 PMS2P5A8MQ11 134 aa18.41■□□□□ 0.54
PMS1-220ENST00000618056 C3orf84H3BNL1 204 aa18.41■□□□□ 0.54
PMS1-220ENST00000618056 CCSO14618 274 aa18.41■□□□□ 0.54
PMS1-220ENST00000618056 NUP62P37198 522 aaPredicted RBP18.41■□□□□ 0.54
PMS1-220ENST00000618056 AP2S1P53680 142 aaPredicted RBP18.41■□□□□ 0.54
PMS1-220ENST00000618056 TMEM14EPQ6UXP3 125 aa18.41■□□□□ 0.54
PMS1-220ENST00000618056 STXBP6Q8NFX7 210 aa18.41■□□□□ 0.54
PMS1-220ENST00000618056 ASB13Q8WXK3 278 aa18.41■□□□□ 0.54
PMS1-220ENST00000618056 K7EQG2 157 aa18.4■□□□□ 0.54
PMS1-220ENST00000618056 TSC22D2O75157 780 aa18.4■□□□□ 0.54
PMS1-220ENST00000618056 MBPP02686 304 aaPredicted RBP18.4■□□□□ 0.54
PMS1-220ENST00000618056 ACOT7LQ6ZUV0 252 aa18.4■□□□□ 0.54
PMS1-220ENST00000618056 OR2T35Q8NGX2 323 aa18.4■□□□□ 0.54
PMS1-220ENST00000618056 MUC7Q8TAX7 377 aa18.4■□□□□ 0.54
PMS1-220ENST00000618056 DCANP1Q8TF63 244 aa18.4■□□□□ 0.54
PMS1-220ENST00000618056 UBE2CO00762 179 aa18.39■□□□□ 0.54
PMS1-220ENST00000618056 CFDP00746 253 aaPredicted RBP18.39■□□□□ 0.54
PMS1-220ENST00000618056 ZNF124Q15973 351 aa18.39■□□□□ 0.54
PMS1-220ENST00000618056 FAM24BQ8N5W8 94 aa18.39■□□□□ 0.54
PMS1-220ENST00000618056 PBDC1Q9BVG4 233 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms