RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 RPP21Q9H633 154 aaKnown RBP8.46□□□□□ -1.05
TNFAIP3-208ENST00000615468 MBNL3Q9NUK0 354 aaKnown RBP8.46□□□□□ -1.05
TNFAIP3-208ENST00000615468 TANC2Q9HCD6 1990 aa8.46□□□□□ -1.05
TNFAIP3-208ENST00000615468 A0A1B0GWB2 263 aa8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 PCNX2A6NKB5 2137 aa8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 H3BMG7 143 aa8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 PKIBQ9C010 78 aa8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 RALYQ9UKM9 306 aaKnown RBP8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 COLCA1Q6ZS62 124 aa8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 Q8IYB0 196 aa8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 OR9G4Q8NGQ1 327 aa8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 MBD6Q96DN6 1003 aa8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 NBASA2RRP1 2371 aa8.46□□□□□ -1.06
TNFAIP3-208ENST00000615468 CEP192Q8TEP8 1941 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 PGPA6NDG6 321 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 C19orf67A6NJJ6 358 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 PRR20EP86478 221 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 PRR20CP86479 221 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 PRR20DP86480 221 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 PRR20BP86481 221 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 PRR20AP86496 221 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 SLC35E4Q6ICL7 350 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 OR13A1Q8NGR1 328 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 FLYWCH2Q96CP2 140 aaKnown RBP8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 SPAG8Q99932 426 aaPredicted RBP8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 SLC25A33Q9BSK2 321 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 ZNF747Q9BV97 191 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 PRR14LQ5THK1 2151 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 SPINK8P0C7L1 97 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 CT45A6P0DMU7 189 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 CT45A5P0DMU8 189 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 CT45A7P0DMV0 189 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 ACP1P24666 158 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 DUTP33316 252 aaKnown RBP8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 CT45A1Q5HYN5 189 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 ATP1A1-AS1Q5TC04 95 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 CT45A3Q8NHU0 189 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 C1orf159Q96HA4 380 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 PPIFP30405 207 aaKnown RBP8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 TMEM164Q5U3C3 297 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 MORN5Q5VZ52 161 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 SPINK14Q6IE38 97 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 PPP1R32Q7Z5V6 425 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 RBMXL3Q8N7X1 1067 aaKnown RBP8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 LINC00470Q9BZP3 86 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 NBEAQ8NFP9 2946 aa8.45□□□□□ -1.06
TNFAIP3-208ENST00000615468 MUC6Q6W4X9 2439 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 SP1P08047 785 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 HSPE1P61604 102 aaKnown RBP8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 RBPMS2Q6ZRY4 209 aaKnown RBP8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 LEAP2Q969E1 77 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 CHRNA10Q9GZZ6 450 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 FXYD2P54710 66 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 TMPRSS3P57727 454 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 IL11RAQ14626 422 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 PCOLCEQ15113 449 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 NRN1LQ496H8 165 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 FAM231DQ6ZW35 169 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 PDPNQ86YL7 162 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 WDR31Q8NA23 367 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 TTTY13Q9BZ97 58 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 FZR1Q9UM11 496 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 EXPH5Q8NEV8 1989 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 C3AR1Q16581 482 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 KRTAP27-1Q3LI81 207 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 C6orf15Q6UXA7 325 aaPredicted RBP8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 TUSC5Q8IXB3 177 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 ZNF414Q96IQ9 312 aa8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 SRSF8Q9BRL6 282 aaKnown RBP8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 MRPL16Q9NX20 251 aaKnown RBP8.44□□□□□ -1.06
TNFAIP3-208ENST00000615468 ZNF503-AS2A6NEH8 195 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 AGFG2O95081 481 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 ORM2P19652 201 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 C10orf113Q5VZT2 155 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 C18orf15Q96N68 181 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 HES7Q9BYE0 225 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 C12orf49Q9H741 205 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 ACACAQ13085 2346 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 OTOGLQ3ZCN5 2332 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 PRSS46E5RG02 174 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 NKX2-8O15522 239 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 RFPL3SP0C7P2 107 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 INSL3P51460 131 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 GAGE13Q4V321 117 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 BOD1L2Q8IYS8 172 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 RNF138Q8WVD3 245 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 GPR82Q96P67 336 aa8.43□□□□□ -1.06
TNFAIP3-208ENST00000615468 A0A1B0GXF2 115 aa8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 MGST3O14880 152 aa8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 CNIH1O95406 144 aa8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 MOSP00540 346 aa8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 COX6A1P12074 109 aa8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 IFI27P40305 119 aaPredicted RBP8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 MRPL14Q6P1L8 145 aaKnown RBP8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 FAM169BQ8N8A8 192 aa8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 GTSF1Q8WW33 167 aa8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 SPANXB1Q9NS25 103 aaPredicted RBP8.42□□□□□ -1.06
TNFAIP3-208ENST00000615468 IGKV1OR2-108A0A075B7D4 117 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms