RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 ELLP55199 621 aaPredicted RBP6.17□□□□□ -1.42
PCDH9-205ENST00000614931 RAB2AP61019 212 aa6.17□□□□□ -1.42
PCDH9-205ENST00000614931 PATE2Q6UY27 113 aa6.17□□□□□ -1.42
PCDH9-205ENST00000614931 STPG3Q8N7X2 389 aa6.17□□□□□ -1.42
PCDH9-205ENST00000614931 SCGB1C1Q8TD33 95 aa6.17□□□□□ -1.42
PCDH9-205ENST00000614931 RCC1LQ96I51 464 aaKnown RBP6.17□□□□□ -1.42
PCDH9-205ENST00000614931 UBE2E2Q96LR5 201 aa6.17□□□□□ -1.42
PCDH9-205ENST00000614931 TXN2Q99757 166 aa6.17□□□□□ -1.42
PCDH9-205ENST00000614931 CITED2Q99967 270 aaPredicted RBP6.17□□□□□ -1.42
PCDH9-205ENST00000614931 PSMG3Q9BT73 122 aaPredicted RBP6.17□□□□□ -1.42
PCDH9-205ENST00000614931 TIMM9Q9Y5J7 89 aa6.17□□□□□ -1.42
PCDH9-205ENST00000614931 PXMP4Q9Y6I8 212 aa6.17□□□□□ -1.42
PCDH9-205ENST00000614931 VWFP04275 2813 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 IGHV3OR16-8A0A075B7F1 116 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 A0A1W2PRX2 142 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 TOMM40O96008 361 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 SEC11BP0C7V7 166 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 PSG1P11464 419 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 C4BPBP20851 252 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 ARL3P36405 182 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 CDX1P47902 265 aaPredicted RBP6.16□□□□□ -1.42
PCDH9-205ENST00000614931 RPL29P47914 159 aaKnown RBP6.16□□□□□ -1.42
PCDH9-205ENST00000614931 YPEL3P61236 119 aaPredicted RBP6.16□□□□□ -1.42
PCDH9-205ENST00000614931 B2MP61769 119 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 KHDC1LQ5JSQ8 128 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 FFAR4Q5NUL3 377 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 SPATA31B1PQ5VZV4 182 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 TEX261Q6UWH6 196 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 SSX7Q7RTT5 188 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 KLHL30-AS1Q8NEE0 82 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 ZNF680Q8NEM1 530 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 OR2G3Q8NGZ4 309 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 C4orf3Q8WVX3 66 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 PCNPQ8WW12 178 aaKnown RBP6.16□□□□□ -1.42
PCDH9-205ENST00000614931 GNPNAT1Q96EK6 184 aaPredicted RBP6.16□□□□□ -1.42
PCDH9-205ENST00000614931 DUX3Q96PT4 197 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 ATP6V0BQ99437 205 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 ZFAND3Q9H8U3 227 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 SLC39A9Q9NUM3 307 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 DOK5Q9P104 306 aa6.16□□□□□ -1.42
PCDH9-205ENST00000614931 TRAV30A0A087WSZ9 112 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 WI2-2373I1.2A0A1W2PRP0 233 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 OR2C1O95371 312 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 EDN2P20800 178 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 FHITP49789 147 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 SULT1A2P50226 295 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 PLP1P60201 277 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 LYZP61626 148 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 EIF5AP63241 154 aaKnown RBP6.15□□□□□ -1.42
PCDH9-205ENST00000614931 ZNF616Q08AN1 781 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 USF2Q15853 346 aaPredicted RBP6.15□□□□□ -1.42
PCDH9-205ENST00000614931 ZNF726P1Q15940 193 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 MORN5Q5VZ52 161 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 SPSB3Q6PJ21 355 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 TOMM20LQ6UXN7 152 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 C8orf86Q6ZUL3 223 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 OR51G1Q8NGK1 321 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 RPRMQ9NS64 109 aa6.15□□□□□ -1.42
PCDH9-205ENST00000614931 PEF1Q9UBV8 284 aaKnown RBP6.15□□□□□ -1.42
PCDH9-205ENST00000614931 PUS1Q9Y606 427 aaKnown RBP eCLIP6.15□□□□□ -1.42
PCDH9-205ENST00000614931 NUDT19A8MXV4 375 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 C17orf112F2Z3M2 114 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 NUPL2O15504 423 aaKnown RBP6.14□□□□□ -1.43
PCDH9-205ENST00000614931 ZNF207O43670 478 aaKnown RBP6.14□□□□□ -1.43
PCDH9-205ENST00000614931 IL4P05112 153 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 RD3LP0DJH9 198 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 SLURP1P55000 103 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 SELENOTP62341 195 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 FAM122CQ6P4D5 195 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 UNQ9165/PRO28630Q6UXU0 137 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 ZNF600Q6ZNG1 722 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 NDUFA11Q86Y39 141 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 ZNF709Q8N972 641 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 TMEM37Q8WXS4 190 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 RNF125Q96EQ8 232 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 PHYHIPLQ96FC7 376 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 RAX2Q96IS3 184 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 UHRF2Q96PU4 802 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 SLC25A22Q9H936 323 aa6.14□□□□□ -1.43
PCDH9-205ENST00000614931 TSSC4Q9Y5U2 329 aaPredicted RBP6.14□□□□□ -1.43
PCDH9-205ENST00000614931 TRAV5A0A0B4J249 113 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 NDUFA4O00483 81 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 RGS13O14921 159 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 GGCTO75223 188 aaKnown RBP6.13□□□□□ -1.43
PCDH9-205ENST00000614931 HSPB1P04792 205 aaKnown RBP6.13□□□□□ -1.43
PCDH9-205ENST00000614931 OR5G3P0C626 314 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 ORM2P19652 201 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 M6PRP20645 277 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 HOXD3P31249 432 aaPredicted RBP6.13□□□□□ -1.43
PCDH9-205ENST00000614931 SERF2P84101 59 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 RAB31Q13636 194 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 FHL3Q13643 280 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 ACOT6Q3I5F7 207 aaPredicted RBP6.13□□□□□ -1.43
PCDH9-205ENST00000614931 NSUN5P1Q3KNT7 163 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 TMEM41BQ5BJD5 291 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 FAM209BQ5JX69 171 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 AKR1C8PQ5T2L2 129 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 KPRPQ5T749 579 aaPredicted RBP6.13□□□□□ -1.43
PCDH9-205ENST00000614931 MIR17HGQ75NE6 70 aa6.13□□□□□ -1.43
PCDH9-205ENST00000614931 C1QL4Q86Z23 238 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms