RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 PRR20EP86478 221 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 PRR20CP86479 221 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 PRR20DP86480 221 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 PRR20BP86481 221 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 PRR20AP86496 221 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 MAJINQ3KP22 176 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 MUC15Q8N387 334 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 CHODLQ9H9P2 273 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 HIF1ANQ9NWT6 349 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 LY96Q9Y6Y9 160 aa10.21□□□□□ -0.78
MSH6-213ENST00000614496 ATP5IP56385 69 aaPredicted RBP10.2□□□□□ -0.78
MSH6-213ENST00000614496 MSMPQ1L6U9 139 aa10.2□□□□□ -0.78
MSH6-213ENST00000614496 SELENOKQ9Y6D0 94 aa10.2□□□□□ -0.78
MSH6-213ENST00000614496 MORN5Q5VZ52 161 aa10.2□□□□□ -0.78
MSH6-213ENST00000614496 SLC25A34Q6PIV7 304 aa10.2□□□□□ -0.78
MSH6-213ENST00000614496 C5orf17Q8NAS9 161 aa10.2□□□□□ -0.78
MSH6-213ENST00000614496 SPRY4Q9C004 299 aa10.2□□□□□ -0.78
MSH6-213ENST00000614496 DIAPH2-AS1Q14236 149 aa10.2□□□□□ -0.78
MSH6-213ENST00000614496 TMEM200BQ69YZ2 307 aa10.2□□□□□ -0.78
MSH6-213ENST00000614496 SLC25A48Q6ZT89 311 aaKnown RBP10.2□□□□□ -0.78
MSH6-213ENST00000614496 Q6ZVH6 145 aa10.2□□□□□ -0.78
MSH6-213ENST00000614496 KIAA1549Q9HCM3 1950 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 CELSR3Q9NYQ7 3312 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 IGHV3OR16-8A0A075B7F1 116 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 KIR2DL5BA0A0G2JN68 375 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 KIR2DL5BA0A0G2JPC4 375 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 KIR2DL5AQ8N109 375 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 C18orf32Q8TCD1 76 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 TRAV9-2A0A087WT02 112 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 ZNF788Q6ZQV5 615 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 C11orf52Q96A22 123 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 HSPB8Q9UJY1 196 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 H0YJW9 148 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 FCER1GP30273 86 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 COTL1Q14019 142 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 LYPD2Q6UXB3 125 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 EXOC3-AS1Q8N2X6 119 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 MYO15AQ9UKN7 3530 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 BDP1A6H8Y1 2624 aa10.19□□□□□ -0.78
MSH6-213ENST00000614496 FAM181BA6NEQ2 426 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 CIARTQ8N365 385 aaPredicted RBP10.18□□□□□ -0.78
MSH6-213ENST00000614496 TANC2Q9HCD6 1990 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 COL4A2P08572 1712 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 IGKV1OR2-108A0A075B7D4 117 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 ZNF785A8K8V0 405 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 TDGF1P13385 188 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 WT1P19544 449 aaPredicted RBP10.18□□□□□ -0.78
MSH6-213ENST00000614496 TEX43Q6ZNM6 134 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 C1orf229Q6ZS94 237 aaPredicted RBP10.18□□□□□ -0.78
MSH6-213ENST00000614496 SCNM1Q9BWG6 230 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 IGLV1-44P01699 117 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 CD3EP07766 207 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 BPIFA4PQ86YQ2 179 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 ORM1P02763 201 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 IL4P05112 153 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 LGALS7P47929 136 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 TMPRSS3P57727 454 aa10.18□□□□□ -0.78
MSH6-213ENST00000614496 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 ARF6P62330 175 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 ZNF841Q6ZN19 808 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 ASCL5Q7RTU5 278 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 ZNF329Q86UD4 541 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 PNKDQ8N490 385 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 TIMD4Q96H15 378 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 TPSG1Q9NRR2 321 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 IGHV3-23P01764 117 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 APOHP02749 345 aaPredicted RBP10.17□□□□□ -0.78
MSH6-213ENST00000614496 WT1-ASQ06250 92 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 TMEM249Q2WGJ8 235 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 SLC25A2Q9BXI2 301 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 ARL3P36405 182 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 MEF2CQ06413 473 aaPredicted RBP10.17□□□□□ -0.78
MSH6-213ENST00000614496 SP5Q6BEB4 398 aaPredicted RBP10.17□□□□□ -0.78
MSH6-213ENST00000614496 WFDC3Q8IUB2 231 aa10.17□□□□□ -0.78
MSH6-213ENST00000614496 IGLC2P0DOY2 106 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 IGLC3P0DOY3 106 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 RBPMS2Q6ZRY4 209 aaKnown RBP10.16□□□□□ -0.78
MSH6-213ENST00000614496 STPG4Q8N801 248 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 AP5S1Q9NUS5 200 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 ZFP30Q9Y2G7 519 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 VPS13AQ96RL7 3174 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 TSPOP30536 169 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 NMUP48645 174 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 SCGB2A2Q13296 93 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 EIF4EBP1Q13541 118 aaPredicted RBP10.16□□□□□ -0.78
MSH6-213ENST00000614496 TMEM30BQ3MIR4 351 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 NDFIP1Q9BT67 221 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 IGHV1-69-2A0A0G2JMI3 117 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 HLA-DRB1P01911 266 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 SPACA3Q8IXA5 215 aa10.16□□□□□ -0.78
MSH6-213ENST00000614496 FNDC4Q9H6D8 234 aaPredicted RBP10.16□□□□□ -0.78
MSH6-213ENST00000614496 PPIAL4CA0A0B4J2A2 164 aa10.15□□□□□ -0.78
MSH6-213ENST00000614496 A0A1W2PPI3 338 aa10.15□□□□□ -0.78
MSH6-213ENST00000614496 LINC00614P0C842 121 aa10.15□□□□□ -0.78
MSH6-213ENST00000614496 PPIAL4GP0DN37 164 aa10.15□□□□□ -0.78
MSH6-213ENST00000614496 SMIM15Q7Z3B0 74 aa10.15□□□□□ -0.78
MSH6-213ENST00000614496 RAB37Q96AX2 223 aa10.15□□□□□ -0.78
MSH6-213ENST00000614496 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
MSH6-213ENST00000614496 LIPFP07098 398 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms