RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 C4BPBP20851 252 aa11.27□□□□□ -0.61
CD48-203ENST00000613788 BPIFCQ8NFQ6 507 aa11.27□□□□□ -0.61
CD48-203ENST00000613788 OR51G1Q8NGK1 321 aa11.27□□□□□ -0.61
CD48-203ENST00000613788 SPATA3Q8NHX4 192 aa11.27□□□□□ -0.61
CD48-203ENST00000613788 SLC45A2Q9UMX9 530 aa11.27□□□□□ -0.61
CD48-203ENST00000613788 BCL2L11O43521 198 aa11.26□□□□□ -0.61
CD48-203ENST00000613788 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
CD48-203ENST00000613788 RPL7L1Q6DKI1 246 aaKnown RBP11.26□□□□□ -0.61
CD48-203ENST00000613788 TOMM20LQ6UXN7 152 aa11.26□□□□□ -0.61
CD48-203ENST00000613788 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
CD48-203ENST00000613788 NPCDR1Q9BY65 106 aa11.26□□□□□ -0.61
CD48-203ENST00000613788 KCNIP2Q9NS61 270 aa11.26□□□□□ -0.61
CD48-203ENST00000613788 RPL29P47914 159 aaKnown RBP11.25□□□□□ -0.61
CD48-203ENST00000613788 EIF5AP63241 154 aaKnown RBP11.25□□□□□ -0.61
CD48-203ENST00000613788 REC114Q7Z4M0 266 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 C9orf62Q8N4C0 152 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 PPP1R14BQ96C90 147 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 GINS3Q9BRX5 216 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 C20orf24Q9BUV8 137 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 GGTLC1Q9BX51 225 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 CYTL1Q9NRR1 136 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 PEMTQ9UBM1 199 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 UFC1Q9Y3C8 167 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 WI2-2373I1.2A0A1W2PRP0 233 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 IL4P05112 153 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 HNRNPCP07910 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
CD48-203ENST00000613788 GATA2P23769 480 aaPredicted RBP11.25□□□□□ -0.61
CD48-203ENST00000613788 NKX2-5P52952 324 aaPredicted RBP11.25□□□□□ -0.61
CD48-203ENST00000613788 ELLP55199 621 aaPredicted RBP11.25□□□□□ -0.61
CD48-203ENST00000613788 OPCMLQ14982 345 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 TMEM182Q6ZP80 229 aaPredicted RBP11.25□□□□□ -0.61
CD48-203ENST00000613788 Q6ZRG5 221 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 TMEM190Q8WZ59 177 aa11.25□□□□□ -0.61
CD48-203ENST00000613788 GNPNAT1Q96EK6 184 aaPredicted RBP11.25□□□□□ -0.61
CD48-203ENST00000613788 ZNF471Q9BX82 626 aaPredicted RBP11.25□□□□□ -0.61
CD48-203ENST00000613788 K7EMT4 169 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 OVOL1O14753 267 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 LINC00869P0C866 280 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 PXDC1Q5TGL8 231 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 LAMTOR1Q6IAA8 161 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 UNQ9165/PRO28630Q6UXU0 137 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 LINC00482Q8N8I6 264 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 HSD17B11Q8NBQ5 300 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 RNF125Q96EQ8 232 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 RCC1LQ96I51 464 aaKnown RBP11.24□□□□□ -0.61
CD48-203ENST00000613788 ZNF414Q96IQ9 312 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 RSG1Q9BU20 258 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 PBDC1Q9BVG4 233 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 ZFAND3Q9H8U3 227 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 TIMM9Q9Y5J7 89 aa11.24□□□□□ -0.61
CD48-203ENST00000613788 A8MWP6 167 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 TSPAN15O95858 294 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 NPPCP23582 126 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 PLP1P60201 277 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 LYZP61626 148 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 B2MP61769 119 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 PRR20EP86478 221 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 PRR20CP86479 221 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 PRR20DP86480 221 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 PRR20BP86481 221 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 PRR20AP86496 221 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 MIC13Q5XKP0 118 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 STPG3Q8N7X2 389 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 OR9G4Q8NGQ1 327 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 ELOVL1Q9BW60 279 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 DAZ1Q9NQZ3 744 aaKnown RBP11.23□□□□□ -0.61
CD48-203ENST00000613788 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 PFDN2Q9UHV9 154 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 PXMP4Q9Y6I8 212 aa11.23□□□□□ -0.61
CD48-203ENST00000613788 IGHV3OR16-8A0A075B7F1 116 aa11.22□□□□□ -0.61
CD48-203ENST00000613788 BOLA2-SMG1P6H3BVE0 249 aa11.22□□□□□ -0.61
CD48-203ENST00000613788 ORM2P19652 201 aa11.22□□□□□ -0.61
CD48-203ENST00000613788 ATP6V0CP27449 155 aa11.22□□□□□ -0.61
CD48-203ENST00000613788 S100A7P31151 101 aa11.22□□□□□ -0.61
CD48-203ENST00000613788 S100A7AQ86SG5 101 aa11.22□□□□□ -0.61
CD48-203ENST00000613788 METTL26Q96S19 204 aa11.22□□□□□ -0.61
CD48-203ENST00000613788 PSMG3Q9BT73 122 aaPredicted RBP11.22□□□□□ -0.61
CD48-203ENST00000613788 ARV1Q9H2C2 271 aa11.22□□□□□ -0.61
CD48-203ENST00000613788 RABAC1Q9UI14 185 aa11.22□□□□□ -0.61
CD48-203ENST00000613788 ELOA3CA0A087WX78 387 aaPredicted RBP11.21□□□□□ -0.61
CD48-203ENST00000613788 HYPMO75409 117 aa11.21□□□□□ -0.61
CD48-203ENST00000613788 TPT1P13693 172 aaKnown RBP11.21□□□□□ -0.61
CD48-203ENST00000613788 TM4SF20Q53R12 229 aa11.21□□□□□ -0.61
CD48-203ENST00000613788 SLC51BQ86UW2 128 aa11.21□□□□□ -0.61
CD48-203ENST00000613788 OR1L4Q8NGR5 311 aa11.21□□□□□ -0.61
CD48-203ENST00000613788 OR1B1Q8NGR6 318 aa11.21□□□□□ -0.61
CD48-203ENST00000613788 MARC2Q969Z3 335 aa11.21□□□□□ -0.61
CD48-203ENST00000613788 NARS2Q96I59 477 aaKnown RBP11.21□□□□□ -0.61
CD48-203ENST00000613788 STAB1Q9NY15 2570 aa11.21□□□□□ -0.61
CD48-203ENST00000613788 ZNF207O43670 478 aaKnown RBP11.2□□□□□ -0.62
CD48-203ENST00000613788 OR5G3P0C626 314 aa11.2□□□□□ -0.62
CD48-203ENST00000613788 CD33P20138 364 aa11.2□□□□□ -0.62
CD48-203ENST00000613788 SERF2P84101 59 aa11.2□□□□□ -0.62
CD48-203ENST00000613788 USF2Q15853 346 aaPredicted RBP11.2□□□□□ -0.62
CD48-203ENST00000613788 BAP18Q8IXM2 172 aa11.2□□□□□ -0.62
CD48-203ENST00000613788 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
CD48-203ENST00000613788 STOML3Q8TAV4 291 aa11.2□□□□□ -0.62
CD48-203ENST00000613788 PFDN5Q99471 154 aa11.2□□□□□ -0.62
CD48-203ENST00000613788 DNAJC4Q9NNZ3 241 aa11.2□□□□□ -0.62
CD48-203ENST00000613788 MRPL27Q9P0M9 148 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms