RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 TRAV25A0A0B4J276 109 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 A0A1W2PS18 150 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 IGSF23A1L1A6 192 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 H0YIZ8 118 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 CD5P06127 495 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 GP9P14770 177 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 EDN2P20800 178 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 NUP62P37198 522 aaPredicted RBP10.04□□□□□ -0.8
MDC1-209ENST00000613547 KRTAP10-11P60412 298 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 RAP2BP61225 183 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 SELENOTP62341 195 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 ZNF90Q03938 601 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 BAXQ07812 192 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 ATP6V1FQ16864 119 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 RNF125Q96EQ8 232 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 WDR89Q96FK6 387 aaPredicted RBP10.04□□□□□ -0.8
MDC1-209ENST00000613547 GRAMD2BQ96HH9 432 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 ZNF414Q96IQ9 312 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 PBDC1Q9BVG4 233 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 TMEM147Q9BVK8 224 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 RHPN1-AS1Q9BWJ2 59 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 UQCC1Q9NVA1 299 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 AURKAIP1Q9NWT8 199 aaPredicted RBP10.04□□□□□ -0.8
MDC1-209ENST00000613547 MLXQ9UH92 298 aa10.04□□□□□ -0.8
MDC1-209ENST00000613547 MEGF8Q7Z7M0 2845 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 IGKV1OR2-108A0A075B7D4 117 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 PRB2P02812 416 aaPredicted RBP10.03□□□□□ -0.8
MDC1-209ENST00000613547 EWSR1Q01844 656 aaKnown RBP eCLIP10.03□□□□□ -0.8
MDC1-209ENST00000613547 ARL16Q0P5N6 197 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 OR2F1Q13607 317 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 RAB31Q13636 194 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 GUCA2BQ16661 112 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 GTSCR1Q86UQ5 136 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 RNF126Q9BV68 326 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 MBD2Q9UBB5 411 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 RABAC1Q9UI14 185 aa10.03□□□□□ -0.8
MDC1-209ENST00000613547 IGHV3-49A0A0A0MS15 119 aa10.02□□□□□ -0.81
MDC1-209ENST00000613547 CHEK1O14757 476 aa10.02□□□□□ -0.81
MDC1-209ENST00000613547 HNRNPCP07910 306 aaKnown RBP eCLIP10.02□□□□□ -0.81
MDC1-209ENST00000613547 CRYBB3P26998 211 aa10.02□□□□□ -0.81
MDC1-209ENST00000613547 S100A7P31151 101 aa10.02□□□□□ -0.81
MDC1-209ENST00000613547 EIF2B2P49770 351 aaKnown RBP10.02□□□□□ -0.81
MDC1-209ENST00000613547 LYZP61626 148 aa10.02□□□□□ -0.81
MDC1-209ENST00000613547 CYP2G1PQ6ZSU1 146 aa10.02□□□□□ -0.81
MDC1-209ENST00000613547 ZNF546Q86UE3 836 aa10.02□□□□□ -0.81
MDC1-209ENST00000613547 TMEM61Q8N0U2 210 aa10.02□□□□□ -0.81
MDC1-209ENST00000613547 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
MDC1-209ENST00000613547 IGHV3OR16-13A0A075B7E8 117 aa10.01□□□□□ -0.81
MDC1-209ENST00000613547 IGHV3-74A0A0B4J1X5 117 aa10.01□□□□□ -0.81
MDC1-209ENST00000613547 WI2-2373I1.2A0A1W2PRP0 233 aa10.01□□□□□ -0.81
MDC1-209ENST00000613547 LYL1P12980 280 aa10.01□□□□□ -0.81
MDC1-209ENST00000613547 RPL12P30050 165 aaKnown RBP10.01□□□□□ -0.81
MDC1-209ENST00000613547 NHLH2Q02577 135 aa10.01□□□□□ -0.81
MDC1-209ENST00000613547 USF2Q15853 346 aaPredicted RBP10.01□□□□□ -0.81
MDC1-209ENST00000613547 S100A7AQ86SG5 101 aa10.01□□□□□ -0.81
MDC1-209ENST00000613547 OR5C1Q8NGR4 320 aa10.01□□□□□ -0.81
MDC1-209ENST00000613547 PRR25Q96S07 402 aa10.01□□□□□ -0.81
MDC1-209ENST00000613547 VSIRQ9H7M9 311 aa10.01□□□□□ -0.81
MDC1-209ENST00000613547 UBE2L5PA0A1B0GUS4 154 aa10□□□□□ -0.81
MDC1-209ENST00000613547 IZUMO1RA6ND01 250 aa10□□□□□ -0.81
MDC1-209ENST00000613547 OR4C46A6NHA9 309 aa10□□□□□ -0.81
MDC1-209ENST00000613547 TSPAN4O14817 238 aa10□□□□□ -0.81
MDC1-209ENST00000613547 CAMLGP49069 296 aa10□□□□□ -0.81
MDC1-209ENST00000613547 VWC2Q2TAL6 325 aa10□□□□□ -0.81
MDC1-209ENST00000613547 OR2T35Q8NGX2 323 aa10□□□□□ -0.81
MDC1-209ENST00000613547 MRAPQ8TCY5 172 aa10□□□□□ -0.81
MDC1-209ENST00000613547 ST8SIA2Q92186 375 aa10□□□□□ -0.81
MDC1-209ENST00000613547 PPP1R14BQ96C90 147 aa10□□□□□ -0.81
MDC1-209ENST00000613547 RNF2Q99496 336 aa10□□□□□ -0.81
MDC1-209ENST00000613547 SPAG8Q99932 426 aaPredicted RBP10□□□□□ -0.81
MDC1-209ENST00000613547 SLC45A2Q9UMX9 530 aa10□□□□□ -0.81
MDC1-209ENST00000613547 WDR83OSQ9Y284 106 aa10□□□□□ -0.81
MDC1-209ENST00000613547 LSM4Q9Y4Z0 139 aaKnown RBP10□□□□□ -0.81
MDC1-209ENST00000613547 IGHV3-66A0A0C4DH42 116 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 HELTA6NFD8 242 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 ZNF785A8K8V0 405 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 AGPAT2O15120 278 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 MPDU1O75352 247 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 DFFBO76075 338 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 APOHP02749 345 aaPredicted RBP9.99□□□□□ -0.81
MDC1-209ENST00000613547 LINC00869P0C866 280 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 ORM2P19652 201 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 RPL11P62913 178 aaKnown RBP9.99□□□□□ -0.81
MDC1-209ENST00000613547 PAFAH1B2P68402 229 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 CLINT1Q14677 625 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 TCF24Q7RTU0 167 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 HSPB11Q9Y547 144 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 SELENOKQ9Y6D0 94 aa9.99□□□□□ -0.81
MDC1-209ENST00000613547 FGF7P21781 194 aa9.98□□□□□ -0.81
MDC1-209ENST00000613547 GATA2P23769 480 aaPredicted RBP9.98□□□□□ -0.81
MDC1-209ENST00000613547 AP2S1P53680 142 aaPredicted RBP9.98□□□□□ -0.81
MDC1-209ENST00000613547 DEFB121Q5J5C9 76 aa9.98□□□□□ -0.81
MDC1-209ENST00000613547 PXDC1Q5TGL8 231 aa9.98□□□□□ -0.81
MDC1-209ENST00000613547 INO80EQ8NBZ0 244 aaPredicted RBP9.98□□□□□ -0.81
MDC1-209ENST00000613547 OR1B1Q8NGR6 318 aa9.98□□□□□ -0.81
MDC1-209ENST00000613547 MGST2Q99735 147 aa9.98□□□□□ -0.81
MDC1-209ENST00000613547 ATP5SQ99766 215 aa9.98□□□□□ -0.81
MDC1-209ENST00000613547 FBXL17Q9UF56 701 aa9.98□□□□□ -0.81
MDC1-209ENST00000613547 RNF24Q9Y225 148 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms