RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GAGE2EQ4V326 116 aa14.39□□□□□ -0.11
HMGXB3-206ENST00000613459 PLEKHB2Q96CS7 222 aa14.39□□□□□ -0.11
HMGXB3-206ENST00000613459 GAGE2DQ9UEU5 116 aa14.39□□□□□ -0.11
HMGXB3-206ENST00000613459 FAM186AA6NE01 2351 aa14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 ADCYAP1P18509 176 aa14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 SRSF4Q08170 494 aaKnown RBP14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 LYPD1Q8N2G4 141 aa14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 Q6ZS49 121 aa14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 BRCA1P38398 1863 aaKnown RBP14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 TDRD6O60522 2096 aaKnown RBP14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 NABP1Q96AH0 204 aa14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 SLC25A39Q9BZJ4 359 aaPredicted RBP14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 LTBRP36941 435 aa14.38□□□□□ -0.11
HMGXB3-206ENST00000613459 SPRR3Q9UBC9 169 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 TRAV41A0A0B4J266 112 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 A0A1B0GWJ7 208 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 EVI2AP22794 236 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 SPTBP11277 2137 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 C9orf139Q6ZV77 190 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 ZNF319Q9P2F9 582 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 MTCL1Q9Y4B5 1905 aaKnown RBP14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 ZNF688P0C7X2 276 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 SFTA2Q6UW10 78 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 TMEM14EPQ6UXP3 125 aa14.37□□□□□ -0.11
HMGXB3-206ENST00000613459 IGHV2-70P01814 119 aa14.36□□□□□ -0.11
HMGXB3-206ENST00000613459 SRSF8Q9BRL6 282 aaKnown RBP14.36□□□□□ -0.11
HMGXB3-206ENST00000613459 SSBP2P81877 361 aaPredicted RBP14.36□□□□□ -0.11
HMGXB3-206ENST00000613459 TRGV4A0A0C4DH28 118 aa14.36□□□□□ -0.11
HMGXB3-206ENST00000613459 PSME4Q14997 1843 aa14.36□□□□□ -0.11
HMGXB3-206ENST00000613459 NMSQ5H8A3 153 aa14.36□□□□□ -0.11
HMGXB3-206ENST00000613459 OVOL2Q9BRP0 275 aa14.36□□□□□ -0.11
HMGXB3-206ENST00000613459 IGHV2-26A0A0B4J1V2 119 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 IGKV3D-20A0A0C4DH25 116 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 IGKV1-12A0A0C4DH73 117 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 IGKV1D-12P01611 117 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 CRPP02741 224 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 ESDP10768 282 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 CACNA1IQ9P0X4 2223 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 ADARB2-AS1A8MUL3 147 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 M0R1W7 72 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 GGNQ86UU5 652 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 MRPL27Q9P0M9 148 aaKnown RBP14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 AHCTF1Q8WYP5 2266 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 IGKV1D-8A0A087WSZ0 117 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 CDKN1AP38936 164 aa14.35□□□□□ -0.11
HMGXB3-206ENST00000613459 LGALS1P09382 135 aaKnown RBP14.34□□□□□ -0.11
HMGXB3-206ENST00000613459 PRADC1Q9BSG0 188 aa14.34□□□□□ -0.11
HMGXB3-206ENST00000613459 XIRP1Q702N8 1843 aaKnown RBP14.34□□□□□ -0.11
HMGXB3-206ENST00000613459 TRBV7-1A0A0A6YYK4 115 aa14.34□□□□□ -0.11
HMGXB3-206ENST00000613459 RPRMLQ8N4K4 120 aa14.34□□□□□ -0.11
HMGXB3-206ENST00000613459 TPTE2P1Q5T6R2 138 aa14.34□□□□□ -0.11
HMGXB3-206ENST00000613459 LINC01551Q86U37 167 aa14.34□□□□□ -0.11
HMGXB3-206ENST00000613459 C17orf82Q86X59 251 aaPredicted RBP14.34□□□□□ -0.11
HMGXB3-206ENST00000613459 METRNQ9UJH8 293 aa14.34□□□□□ -0.11
HMGXB3-206ENST00000613459 IGHV3OR16-8A0A075B7F1 116 aa14.33□□□□□ -0.11
HMGXB3-206ENST00000613459 IGHV1-8P0DP01 117 aa14.33□□□□□ -0.11
HMGXB3-206ENST00000613459 LINC00477Q96M19 166 aa14.33□□□□□ -0.11
HMGXB3-206ENST00000613459 SVILO95425 2214 aa14.33□□□□□ -0.11
HMGXB3-206ENST00000613459 FOXF2Q12947 444 aa14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 C20orf204Q6ZNR8 217 aa14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 PRDM6Q9NQX0 595 aa14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 EFNA4P52798 201 aa14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 TCRAP04437 139 aa14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 CD300EQ496F6 205 aaPredicted RBP14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 TMEM155Q4W5P6 130 aa14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 GTSCR1Q86UQ5 136 aa14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 BCL6BQ8N143 479 aaPredicted RBP14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 MGST2Q99735 147 aa14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 S100A7L2Q5SY68 101 aa14.33□□□□□ -0.12
HMGXB3-206ENST00000613459 CASP8AP2Q9UKL3 1982 aa14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 KLF17Q5JT82 389 aaPredicted RBP14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 CRIM1Q9NZV1 1036 aa14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 D6R8Y8 96 aa14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 ZNF138P52744 262 aa14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 SUPT4H1P63272 117 aaKnown RBP14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 FAM90A2PQ658T7 463 aa14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 GLMPQ8WWB7 406 aa14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 DLX4Q92988 240 aaPredicted RBP14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 LYL1P12980 280 aa14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 APC2O95996 2303 aa14.32□□□□□ -0.12
HMGXB3-206ENST00000613459 TRAV5A0A0B4J249 113 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 UBE2V1Q13404 147 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 GUSBP1Q15486 140 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 MAJINQ3KP22 176 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 LOC285556D6RIA3 1793 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 IGHV1-3A0A0C4DH29 117 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 RASL10AQ92737 203 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 USMG5Q96IX5 58 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 PINLYPA6NC86 204 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 CRIPAKQ8N1N5 446 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 TMEM178BH3BS89 294 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 ITGB1BP1O14713 200 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 ZNF672Q499Z4 452 aaPredicted RBP14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 SCN2AQ99250 2005 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 DPH3P1Q9H4G8 78 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 ZNF415Q09FC8 603 aa14.31□□□□□ -0.12
HMGXB3-206ENST00000613459 FGFBP3Q8TAT2 258 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 EREGO14944 169 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 PSG1P11464 419 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 A0A087WV48 116 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms