RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TMEM131Q92545 1883 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.17□□□□□ -1.58
SNX13-213ENST00000611725 ZNF785A8K8V0 405 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 CR1LQ2VPA4 569 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 C21orf62Q9NYP8 219 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 CTSZQ9UBR2 303 aa5.17□□□□□ -1.58
SNX13-213ENST00000611725 CENPEQ02224 2701 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 TRAV30A0A087WSZ9 112 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 IGHV1-3A0A0C4DH29 117 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 K7ENP7 123 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 FOXH1O75593 365 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 LY6HO94772 140 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 RAB4AP20338 218 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 GNG5P63218 68 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 DIAPH2-AS1Q14236 149 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 RNF5Q99942 180 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 RAXQ9Y2V3 346 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 SIGLEC9Q9Y336 463 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 FOSL1P15407 271 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 ACTL10Q5JWF8 245 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 ZNF833PQ6ZTB9 187 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 ATG101Q9BSB4 218 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 MED12LQ86YW9 2145 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 TMEM11P17152 192 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 YPEL3P61236 119 aaPredicted RBP5.16□□□□□ -1.58
SNX13-213ENST00000611725 UNQ5815/PRO19632Q6UWF5 114 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 SMIM15Q7Z3B0 74 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 PRNTQ86SH4 94 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 LINC00479Q96M42 142 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 S4R3C0 116 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 PSG1P11464 419 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 RIGQ13278 110 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 NEU4Q8WWR8 484 aaPredicted RBP5.16□□□□□ -1.58
SNX13-213ENST00000611725 C14orf144Q96I85 54 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 HIF1ANQ9NWT6 349 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 TCRAP04437 139 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 HBBP68871 147 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 GBGT1Q8N5D6 347 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 RNF125Q96EQ8 232 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 TMEM191AQ9H0A3 160 aa5.16□□□□□ -1.58
SNX13-213ENST00000611725 HIGD1CA8MV81 97 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 FAM106CPP0CH98 169 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 GZMBP10144 247 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 COL8A2P25067 703 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 CX3CL1P78423 397 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 MSRB2Q9Y3D2 182 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 TBL2Q9Y4P3 447 aaKnown RBP5.15□□□□□ -1.58
SNX13-213ENST00000611725 F11RQ9Y624 299 aaKnown RBP5.15□□□□□ -1.58
SNX13-213ENST00000611725 A0A1B0GWJ7 208 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 ADMP35318 185 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 CDKN1AP38936 164 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 KLF17Q5JT82 389 aaPredicted RBP5.15□□□□□ -1.58
SNX13-213ENST00000611725 THBDP07204 575 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 PLA2G5P39877 138 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 RPL11P62913 178 aaKnown RBP5.15□□□□□ -1.58
SNX13-213ENST00000611725 UBTD1Q9HAC8 227 aa5.15□□□□□ -1.58
SNX13-213ENST00000611725 HIVEP3Q5T1R4 2406 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 IGKV1OR2-108A0A075B7D4 117 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 SERTM2A0A1B0GWG4 89 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 OR2J3O76001 311 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 EIF4EBP1Q13541 118 aaPredicted RBP5.15□□□□□ -1.59
SNX13-213ENST00000611725 Q6ZN92 141 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 C19orf35Q6ZS72 473 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 GNB1LQ9BYB4 327 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 Q9H3A6 140 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 COL4A2P08572 1712 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 IZUMO1RA6ND01 250 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 DLX1P56177 255 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 TSKUQ8WUA8 353 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 GRAMD2BQ96HH9 432 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 TRGV9Q99603 122 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 NRN1Q9NPD7 142 aa5.15□□□□□ -1.59
SNX13-213ENST00000611725 AP1S3Q96PC3 154 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 TPSG1Q9NRR2 321 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 IGHV3OR16-8A0A075B7F1 116 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 SFTPCP11686 197 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 PVRIGQ6DKI7 326 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 TMEM116Q8NCL8 245 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 RPP21Q9H633 154 aaKnown RBP5.14□□□□□ -1.59
SNX13-213ENST00000611725 A0A1B0GUS0 222 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 BUB1B-PAK6H3BSN5 160 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 LEPROTL1O95214 131 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 PRTN3P24158 256 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 LINC00574Q9H8X3 128 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 IGHV3OR16-13A0A075B7E8 117 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 IGHV3-74A0A0B4J1X5 117 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 A8MWP6 167 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 ORM1P02763 201 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 NUDT10Q8NFP7 164 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 NUDT11Q96G61 164 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 PGLYRP4Q96LB8 373 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 SSBP4Q9BWG4 385 aaPredicted RBP5.14□□□□□ -1.59
SNX13-213ENST00000611725 M0QZK8 103 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 M0R3E3 92 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 PMCHL1Q16048 86 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 FAM19A2Q8N3H0 131 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 C8orf46Q8TAG6 207 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 SOX21Q9Y651 276 aaPredicted RBP5.14□□□□□ -1.59
SNX13-213ENST00000611725 A0A1B0GV90 55 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 C8orf31Q8N9H6 132 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms