RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 A0A1W2PRE2 83 aa16.47■□□□□ 0.23
SSBP3-216ENST00000610401 LHBP01229 141 aa16.47■□□□□ 0.23
SSBP3-216ENST00000610401 GLRXP35754 106 aa16.47■□□□□ 0.23
SSBP3-216ENST00000610401 CA7P43166 264 aa16.47■□□□□ 0.23
SSBP3-216ENST00000610401 FXYD7P58549 80 aa16.47■□□□□ 0.23
SSBP3-216ENST00000610401 RNASE8Q8TDE3 154 aaKnown RBP16.47■□□□□ 0.23
SSBP3-216ENST00000610401 CBY3A6NI87 242 aa16.47■□□□□ 0.23
SSBP3-216ENST00000610401 hADV38S2A0JD32 116 aa16.46■□□□□ 0.23
SSBP3-216ENST00000610401 TMEM177Q53S58 311 aa16.46■□□□□ 0.23
SSBP3-216ENST00000610401 SLC25A48Q6ZT89 311 aaKnown RBP16.46■□□□□ 0.23
SSBP3-216ENST00000610401 ATRXP46100 2492 aa16.46■□□□□ 0.23
SSBP3-216ENST00000610401 DLL1O00548 723 aa16.46■□□□□ 0.23
SSBP3-216ENST00000610401 VAMP3Q15836 100 aa16.46■□□□□ 0.23
SSBP3-216ENST00000610401 CIARTQ8N365 385 aaPredicted RBP16.46■□□□□ 0.23
SSBP3-216ENST00000610401 RAI1Q7Z5J4 1906 aaPredicted RBP16.46■□□□□ 0.23
SSBP3-216ENST00000610401 DSCAML1Q8TD84 2053 aa16.46■□□□□ 0.23
SSBP3-216ENST00000610401 TRAV9-1A0A075B6T8 112 aa16.46■□□□□ 0.22
SSBP3-216ENST00000610401 EXOC3-AS1Q8N2X6 119 aa16.46■□□□□ 0.22
SSBP3-216ENST00000610401 C2orf83Q53S99 150 aa16.45■□□□□ 0.22
SSBP3-216ENST00000610401 ADTRPQ96IZ2 230 aa16.45■□□□□ 0.22
SSBP3-216ENST00000610401 ZNF257Q9Y2Q1 563 aa16.45■□□□□ 0.22
SSBP3-216ENST00000610401 WASHC3Q9Y3C0 194 aa16.45■□□□□ 0.22
SSBP3-216ENST00000610401 H0YJW9 148 aa16.45■□□□□ 0.22
SSBP3-216ENST00000610401 LY96Q9Y6Y9 160 aa16.45■□□□□ 0.22
SSBP3-216ENST00000610401 COL6A6A6NMZ7 2263 aa16.45■□□□□ 0.22
SSBP3-216ENST00000610401 TMSB15BA0A087X1C1 80 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 LYZP61626 148 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 MPV17L2Q567V2 206 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 TMEM200BQ69YZ2 307 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 C19orf67A6NJJ6 358 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 LYNX1G3V0Z9 82 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 LYNX1P0DP58 116 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 PRNTQ86SH4 94 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 C1orf162Q8NEQ5 155 aaPredicted RBP16.44■□□□□ 0.22
SSBP3-216ENST00000610401 PRO3102Q9H379 93 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 NDUFA4L2Q9NRX3 87 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 RALYQ9UKM9 306 aaKnown RBP16.44■□□□□ 0.22
SSBP3-216ENST00000610401 KLHDC1Q8N7A1 406 aa16.44■□□□□ 0.22
SSBP3-216ENST00000610401 DAZAP1Q96EP5 407 aaKnown RBP16.44■□□□□ 0.22
SSBP3-216ENST00000610401 ALKBH7Q9BT30 221 aaPredicted RBP16.44■□□□□ 0.22
SSBP3-216ENST00000610401 OR4C46A6NHA9 309 aa16.43■□□□□ 0.22
SSBP3-216ENST00000610401 FXYD5Q96DB9 178 aa16.43■□□□□ 0.22
SSBP3-216ENST00000610401 A0A1W2PPI3 338 aa16.43■□□□□ 0.22
SSBP3-216ENST00000610401 CGB1A6NKQ9 187 aa16.43■□□□□ 0.22
SSBP3-216ENST00000610401 C22orf46C9J442 243 aa16.43■□□□□ 0.22
SSBP3-216ENST00000610401 FCN3O75636 299 aa16.43■□□□□ 0.22
SSBP3-216ENST00000610401 TNFSF4P23510 183 aa16.43■□□□□ 0.22
SSBP3-216ENST00000610401 ZNF788Q6ZQV5 615 aa16.43■□□□□ 0.22
SSBP3-216ENST00000610401 ZNF714Q96N38 554 aa16.43■□□□□ 0.22
SSBP3-216ENST00000610401 COL27A1Q8IZC6 1860 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-216ENST00000610401 NBEAP1P0C6P0 100 aa16.42■□□□□ 0.22
SSBP3-216ENST00000610401 FAM215AQ9Y5M1 114 aa16.42■□□□□ 0.22
SSBP3-216ENST00000610401 ZNF883P0CG24 379 aa16.42■□□□□ 0.22
SSBP3-216ENST00000610401 ASCL3Q9NQ33 180 aa16.42■□□□□ 0.22
SSBP3-216ENST00000610401 IGKV1D-37A0A075B6S9 117 aa16.42■□□□□ 0.22
SSBP3-216ENST00000610401 P01737 135 aa16.42■□□□□ 0.22
SSBP3-216ENST00000610401 CR1LQ2VPA4 569 aa16.42■□□□□ 0.22
SSBP3-216ENST00000610401 BET1LQ9NYM9 111 aa16.42■□□□□ 0.22
SSBP3-216ENST00000610401 EPDR1Q9UM22 224 aa16.42■□□□□ 0.22
SSBP3-216ENST00000610401 BPIFB3P59826 476 aa16.41■□□□□ 0.22
SSBP3-216ENST00000610401 ETFRF1Q6IPR1 90 aa16.41■□□□□ 0.22
SSBP3-216ENST00000610401 GTSF1Q8WW33 167 aa16.41■□□□□ 0.22
SSBP3-216ENST00000610401 RBP4P02753 201 aa16.41■□□□□ 0.22
SSBP3-216ENST00000610401 GOLT1AQ6ZVE7 132 aa16.41■□□□□ 0.22
SSBP3-216ENST00000610401 GRAMD2BQ96HH9 432 aa16.41■□□□□ 0.22
SSBP3-216ENST00000610401 M0R296 226 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 CHEK1O14757 476 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 NUDT3O95989 172 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 HIST1H1EP10412 219 aaKnown RBP16.4■□□□□ 0.22
SSBP3-216ENST00000610401 COX7A1P24310 79 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 CD40P25942 277 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 TIMM23BQ5SRD1 257 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 LOC389332A0A1B0GUA5 103 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 TCRBV4S1A1TA0A5B7 111 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 SFTPCP11686 197 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 MBD6Q96DN6 1003 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 URB1-AS1Q96HZ7 61 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 COL8A1P27658 744 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 OR8B3Q8NGG8 313 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 C17orf77Q96MU5 243 aa16.4■□□□□ 0.22
SSBP3-216ENST00000610401 IGHV3OR16-8A0A075B7F1 116 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 TRAV9-2A0A087WT02 112 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 PSMB11A5LHX3 300 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 KLK10O43240 276 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 CEACAM8P31997 349 aaPredicted RBP16.39■□□□□ 0.21
SSBP3-216ENST00000610401 OR4C5Q8NGB2 326 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 OR4C13Q8NGP0 309 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 ZNF292O60281 2723 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 S100A7P31151 101 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.39■□□□□ 0.21
SSBP3-216ENST00000610401 NAA38Q9BRA0 125 aaKnown RBP16.39■□□□□ 0.21
SSBP3-216ENST00000610401 CHODLQ9H9P2 273 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 CBY1Q9Y3M2 126 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 CELSR1Q9NYQ6 3014 aa16.39■□□□□ 0.21
SSBP3-216ENST00000610401 LEPROTL1O95214 131 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 FTH1P19P0C7X4 201 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 PLGLAQ15195 96 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 TMEM70Q9BUB7 260 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 C2orf70A6NJV1 201 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 GAGE1Q13065 139 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms