RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 USF2Q15853 346 aaPredicted RBP15.79■□□□□ 0.12
TMEM248-207ENST00000607045 PSMG4Q5JS54 123 aa15.79■□□□□ 0.12
TMEM248-207ENST00000607045 SPANXN2Q5MJ10 180 aa15.79■□□□□ 0.12
TMEM248-207ENST00000607045 Q6ZTC4 211 aa15.79■□□□□ 0.12
TMEM248-207ENST00000607045 NPIPB3Q92617 1050 aa15.79■□□□□ 0.12
TMEM248-207ENST00000607045 SOSTQ9BQB4 213 aa15.79■□□□□ 0.12
TMEM248-207ENST00000607045 PRR13Q9NZ81 148 aa15.79■□□□□ 0.12
TMEM248-207ENST00000607045 TMEM56-RWDD3S4R434 201 aa15.79■□□□□ 0.12
TMEM248-207ENST00000607045 C11orf94C9JXX5 98 aa15.78■□□□□ 0.12
TMEM248-207ENST00000607045 SULT1A3P0DMM9 295 aa15.78■□□□□ 0.12
TMEM248-207ENST00000607045 SULT1A4P0DMN0 295 aa15.78■□□□□ 0.12
TMEM248-207ENST00000607045 TMEM41BQ5BJD5 291 aa15.78■□□□□ 0.12
TMEM248-207ENST00000607045 SLC24A4Q8NFF2 622 aa15.78■□□□□ 0.12
TMEM248-207ENST00000607045 RNASEH2CQ8TDP1 164 aaKnown RBP15.78■□□□□ 0.12
TMEM248-207ENST00000607045 KIAA1109Q2LD37 5005 aa15.78■□□□□ 0.12
TMEM248-207ENST00000607045 HELTA6NFD8 242 aa15.77■□□□□ 0.12
TMEM248-207ENST00000607045 SLC25A4P12235 298 aa15.77■□□□□ 0.12
TMEM248-207ENST00000607045 LGI3Q8N145 548 aa15.77■□□□□ 0.12
TMEM248-207ENST00000607045 TBC1D24Q9ULP9 559 aa15.77■□□□□ 0.12
TMEM248-207ENST00000607045 IL4P05112 153 aa15.76■□□□□ 0.11
TMEM248-207ENST00000607045 AP2S1P53680 142 aaPredicted RBP15.76■□□□□ 0.11
TMEM248-207ENST00000607045 ETFRF1Q6IPR1 90 aa15.76■□□□□ 0.11
TMEM248-207ENST00000607045 ZNF767PQ75MW2 155 aa15.76■□□□□ 0.11
TMEM248-207ENST00000607045 ACY3Q96HD9 319 aa15.76■□□□□ 0.11
TMEM248-207ENST00000607045 CELA1Q9UNI1 258 aa15.76■□□□□ 0.11
TMEM248-207ENST00000607045 A0A0B4J2A0 478 aa15.75■□□□□ 0.11
TMEM248-207ENST00000607045 FAM90A26D6RGX4 464 aa15.75■□□□□ 0.11
TMEM248-207ENST00000607045 BUB3O43684 328 aa15.75■□□□□ 0.11
TMEM248-207ENST00000607045 RD3LP0DJH9 198 aa15.75■□□□□ 0.11
TMEM248-207ENST00000607045 EIF2B2P49770 351 aaKnown RBP15.75■□□□□ 0.11
TMEM248-207ENST00000607045 CCR6P51684 374 aa15.75■□□□□ 0.11
TMEM248-207ENST00000607045 TMED4Q7Z7H5 227 aa15.75■□□□□ 0.11
TMEM248-207ENST00000607045 SLC25A21Q9BQT8 299 aaPredicted RBP15.75■□□□□ 0.11
TMEM248-207ENST00000607045 SHPKQ9UHJ6 478 aa15.75■□□□□ 0.11
TMEM248-207ENST00000607045 TRAV10A0A0B4J240 114 aa15.74■□□□□ 0.11
TMEM248-207ENST00000607045 NPY1RP25929 384 aa15.74■□□□□ 0.11
TMEM248-207ENST00000607045 C12orf74Q32Q52 190 aa15.74■□□□□ 0.11
TMEM248-207ENST00000607045 TMEM128Q5BJH2 165 aa15.74■□□□□ 0.11
TMEM248-207ENST00000607045 NMSQ5H8A3 153 aa15.74■□□□□ 0.11
TMEM248-207ENST00000607045 XCL2Q9UBD3 114 aa15.74■□□□□ 0.11
TMEM248-207ENST00000607045 IGHV4-4A0A075B6R2 117 aa15.73■□□□□ 0.11
TMEM248-207ENST00000607045 H3BMM0 161 aa15.73■□□□□ 0.11
TMEM248-207ENST00000607045 TOMM40O96008 361 aa15.73■□□□□ 0.11
TMEM248-207ENST00000607045 PSG1P11464 419 aa15.73■□□□□ 0.11
TMEM248-207ENST00000607045 DEFB1P60022 68 aa15.73■□□□□ 0.11
TMEM248-207ENST00000607045 KLF9Q13886 244 aaPredicted RBP15.73■□□□□ 0.11
TMEM248-207ENST00000607045 SMCO1Q147U7 214 aa15.73■□□□□ 0.11
TMEM248-207ENST00000607045 OR51G1Q8NGK1 321 aa15.73■□□□□ 0.11
TMEM248-207ENST00000607045 SCRT1Q9BWW7 348 aa15.73■□□□□ 0.11
TMEM248-207ENST00000607045 V9GYH0 126 aa15.73■□□□□ 0.11
TMEM248-207ENST00000607045 DUXBA0A1W2PPF3 345 aa15.72■□□□□ 0.11
TMEM248-207ENST00000607045 IFNA10P01566 189 aa15.72■□□□□ 0.11
TMEM248-207ENST00000607045 VAMP1P23763 118 aa15.72■□□□□ 0.11
TMEM248-207ENST00000607045 GSG1LQ6UXU4 331 aa15.72■□□□□ 0.11
TMEM248-207ENST00000607045 SIGLEC15Q6ZMC9 328 aa15.72■□□□□ 0.11
TMEM248-207ENST00000607045 LYZL2Q7Z4W2 148 aa15.72■□□□□ 0.11
TMEM248-207ENST00000607045 OR1S1Q8NH92 325 aa15.72■□□□□ 0.11
TMEM248-207ENST00000607045 NRN1Q9NPD7 142 aa15.72■□□□□ 0.11
TMEM248-207ENST00000607045 SNRPD3P62318 126 aaKnown RBP15.71■□□□□ 0.11
TMEM248-207ENST00000607045 TRIQKQ629K1 86 aa15.71■□□□□ 0.11
TMEM248-207ENST00000607045 TRIM63Q969Q1 353 aa15.71■□□□□ 0.11
TMEM248-207ENST00000607045 RBKSQ9H477 322 aa15.71■□□□□ 0.11
TMEM248-207ENST00000607045 U3KQ87 197 aa15.71■□□□□ 0.11
TMEM248-207ENST00000607045 PKHD1P08F94 4074 aa15.7■□□□□ 0.1
TMEM248-207ENST00000607045 ATP5IP56385 69 aaPredicted RBP15.7■□□□□ 0.1
TMEM248-207ENST00000607045 CCDC190Q86UF4 302 aa15.7■□□□□ 0.1
TMEM248-207ENST00000607045 RBM38Q9H0Z9 239 aaKnown RBP15.7■□□□□ 0.1
TMEM248-207ENST00000607045 SEPSECSQ9HD40 501 aaKnown RBP15.7■□□□□ 0.1
TMEM248-207ENST00000607045 DEFB131BA0A096LNP1 70 aa15.69■□□□□ 0.1
TMEM248-207ENST00000607045 CENPXA8MT69 81 aa15.69■□□□□ 0.1
TMEM248-207ENST00000607045 SUPT4H1P63272 117 aaKnown RBP15.69■□□□□ 0.1
TMEM248-207ENST00000607045 ZNF90Q03938 601 aa15.69■□□□□ 0.1
TMEM248-207ENST00000607045 GDF5OSQ5U4N7 250 aa15.69■□□□□ 0.1
TMEM248-207ENST00000607045 CENPSQ8N2Z9 138 aa15.69■□□□□ 0.1
TMEM248-207ENST00000607045 DTD1Q8TEA8 209 aa15.69■□□□□ 0.1
TMEM248-207ENST00000607045 NDUFA13Q9P0J0 144 aa15.69■□□□□ 0.1
TMEM248-207ENST00000607045 HSPB7Q9UBY9 170 aa15.69■□□□□ 0.1
TMEM248-207ENST00000607045 NAP1L6A6NFF2 107 aa15.68■□□□□ 0.1
TMEM248-207ENST00000607045 FXYD7P58549 80 aa15.68■□□□□ 0.1
TMEM248-207ENST00000607045 NUTF2P61970 127 aaKnown RBP15.68■□□□□ 0.1
TMEM248-207ENST00000607045 ZNF79Q15937 498 aa15.68■□□□□ 0.1
TMEM248-207ENST00000607045 RNF125Q96EQ8 232 aa15.68■□□□□ 0.1
TMEM248-207ENST00000607045 RNF126Q9BV68 326 aa15.68■□□□□ 0.1
TMEM248-207ENST00000607045 PBDC1Q9BVG4 233 aa15.68■□□□□ 0.1
TMEM248-207ENST00000607045 WDR12Q9GZL7 423 aaKnown RBP15.68■□□□□ 0.1
TMEM248-207ENST00000607045 IGKV1D-37A0A075B6S9 117 aa15.67■□□□□ 0.1
TMEM248-207ENST00000607045 MED6O75586 246 aa15.67■□□□□ 0.1
TMEM248-207ENST00000607045 IGKV3-20P01619 116 aa15.67■□□□□ 0.1
TMEM248-207ENST00000607045 GAMTQ14353 236 aa15.67■□□□□ 0.1
TMEM248-207ENST00000607045 LINC00052Q96N35 136 aa15.67■□□□□ 0.1
TMEM248-207ENST00000607045 C1QTNF4Q9BXJ3 329 aa15.67■□□□□ 0.1
TMEM248-207ENST00000607045 PFDN2Q9UHV9 154 aa15.67■□□□□ 0.1
TMEM248-207ENST00000607045 PCLOQ9Y6V0 5065 aa15.66■□□□□ 0.1
TMEM248-207ENST00000607045 DYNC1H1Q14204 4646 aaKnown RBP15.66■□□□□ 0.1
TMEM248-207ENST00000607045 HLA-DRB4P13762 266 aa15.66■□□□□ 0.1
TMEM248-207ENST00000607045 NKX2-1P43699 371 aaPredicted RBP15.66■□□□□ 0.1
TMEM248-207ENST00000607045 RPP30P78346 268 aaKnown RBP15.66■□□□□ 0.1
TMEM248-207ENST00000607045 TMED3Q9Y3Q3 217 aa15.66■□□□□ 0.1
TMEM248-207ENST00000607045 HLA-DRB4X5D2U9 266 aa15.66■□□□□ 0.1
TMEM248-207ENST00000607045 PKD1P98161 4303 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms