RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	YLPM1	P49750	1951 aa	Known RBP	12.4	□□□□□ -0.42
CELF4-223	ENST00000603232		A0A1W2PS18	150 aa		12.4	□□□□□ -0.42
CELF4-223	ENST00000603232	PDPN	Q86YL7	162 aa		12.4	□□□□□ -0.42
CELF4-223	ENST00000603232	THAP8	Q8NA92	274 aa		12.4	□□□□□ -0.42
CELF4-223	ENST00000603232	KCNS1	Q96KK3	526 aa		12.4	□□□□□ -0.42
CELF4-223	ENST00000603232	HARBI1	Q96MB7	349 aa		12.4	□□□□□ -0.42
CELF4-223	ENST00000603232	NRN1	Q9NPD7	142 aa		12.4	□□□□□ -0.42
CELF4-223	ENST00000603232	ZNF586	Q9NXT0	402 aa		12.4	□□□□□ -0.42
CELF4-223	ENST00000603232	FLNB	O75369	2602 aa	Known RBP	12.4	□□□□□ -0.43
CELF4-223	ENST00000603232	ITPR2	Q14571	2701 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	DIRC3	C9JPN6	131 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	GATA2	P23769	480 aa	Predicted RBP	12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	DEFB108B	Q8NET1	73 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	OR4C13	Q8NGP0	309 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	FLYWCH2	Q96CP2	140 aa	Known RBP	12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	SMIM12	Q96EX1	92 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	CHRDL1	Q9BU40	450 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	MRPL27	Q9P0M9	148 aa	Known RBP	12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	TBL2	Q9Y4P3	447 aa	Known RBP	12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	ASH1L	Q9NR48	2969 aa	Known RBP	12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	BMPR1B	O00238	502 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	SUB1	P53999	127 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	UBE2L3	P68036	154 aa	Known RBP	12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	COL5A1-AS1	Q5SY13	56 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	NIT1	Q86X76	327 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	OR10W1	Q8NGF6	305 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	TMEM186	Q96B77	213 aa		12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	MRPL20	Q9BYC9	149 aa	Known RBP	12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	ZNF430	Q9H8G1	570 aa	Predicted RBP	12.39	□□□□□ -0.43
CELF4-223	ENST00000603232	TCRBV4S1A1T	A0A5B7	111 aa		12.38	□□□□□ -0.43
CELF4-223	ENST00000603232	ZNF137P	P52743	207 aa		12.38	□□□□□ -0.43
CELF4-223	ENST00000603232	BPIFB3	P59826	476 aa		12.38	□□□□□ -0.43
CELF4-223	ENST00000603232	MLANA	Q16655	118 aa		12.38	□□□□□ -0.43
CELF4-223	ENST00000603232	PVRIG	Q6DKI7	326 aa		12.38	□□□□□ -0.43
CELF4-223	ENST00000603232	RCHY1	Q96PM5	261 aa		12.38	□□□□□ -0.43
CELF4-223	ENST00000603232	ZFP30	Q9Y2G7	519 aa		12.38	□□□□□ -0.43
CELF4-223	ENST00000603232	IGLC2	P0DOY2	106 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	IGLC3	P0DOY3	106 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	PRRX1	P54821	245 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	STXBP6	Q8NFX7	210 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	ZNF253	O75346	499 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	ZNF324	O75467	553 aa	Predicted RBP	12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	NDUFB8	O95169	186 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	FSTL3	O95633	263 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	APOBEC3A	P31941	199 aa	Predicted RBP	12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	MYCNOS	P40205	109 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	KRTDAP	P60985	99 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	C10orf113	Q5VZT2	155 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	C19orf35	Q6ZS72	473 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	ZCCHC24	Q8N2G6	241 aa	Known RBP	12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	MUC15	Q8N387	334 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	ST6GALNAC6	Q969X2	333 aa		12.37	□□□□□ -0.43
CELF4-223	ENST00000603232	CSMD1	Q96PZ7	3565 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	CGB1	A6NKQ9	187 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	C17orf100	A8MU93	164 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	TNFRSF13B	O14836	293 aa	Predicted RBP	12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	GOSR1	O95249	250 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	FXYD3	Q14802	87 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	SPATA45	Q537H7	98 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	ZNF329	Q86UD4	541 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	OR2T6	Q8NHC8	308 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	GRAMD2B	Q96HH9	432 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	FAM103A1	Q9BTL3	118 aa	Known RBP	12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	PAXX	Q9BUH6	204 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	ZNF355P	Q9NSJ1	428 aa		12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	ANKRD17	O75179	2603 aa	Known RBP	12.36	□□□□□ -0.43
CELF4-223	ENST00000603232	IGKV1D-37	A0A075B6S9	117 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	COX7A2P2	O60397	106 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	HYPM	O75409	117 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	IGLV2-23	P01705	113 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	MGST1	P10620	155 aa	Known RBP	12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	TFPI2	P48307	235 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	AMT	P48728	403 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	PAX2	Q02962	417 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	WT1-AS	Q06250	92 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	KIAA1644	Q3SXP7	199 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	MORN5	Q5VZ52	161 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	TSKU	Q8WUA8	353 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	ZNRD1	Q9P1U0	126 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	UQCR10	Q9UDW1	63 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232		E7EUB6	86 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	PEX7	O00628	323 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	APCS	P02743	223 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	CRYGC	P07315	174 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	C3orf79	P0CE67	100 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	SRI	P30626	198 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	KLF5	Q13887	457 aa	Predicted RBP	12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	MMD	Q15546	238 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	TMEM200B	Q69YZ2	307 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	ETFRF1	Q6IPR1	90 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	PATE2	Q6UY27	113 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	STPG4	Q8N801	248 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	FXYD5	Q96DB9	178 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	C7orf69	Q9H7B7	122 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	WASHC3	Q9Y3C0	194 aa		12.35	□□□□□ -0.43
CELF4-223	ENST00000603232	SETX	Q7Z333	2677 aa	Known RBP	12.34	□□□□□ -0.43
CELF4-223	ENST00000603232	TRAV5	A0A0B4J249	113 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 237.5 ms