RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 CCDC28AQ8IWP9 274 aa7.85□□□□□ -1.15
UPF1-213ENST00000601981 STPG3Q8N7X2 389 aa7.85□□□□□ -1.15
UPF1-213ENST00000601981 RNF152Q8N8N0 203 aa7.85□□□□□ -1.15
UPF1-213ENST00000601981 THAP8Q8NA92 274 aa7.85□□□□□ -1.15
UPF1-213ENST00000601981 OR4F17Q8NGA8 305 aa7.85□□□□□ -1.15
UPF1-213ENST00000601981 OR4F4Q96R69 305 aa7.85□□□□□ -1.15
UPF1-213ENST00000601981 FNDC4Q9H6D8 234 aaPredicted RBP7.85□□□□□ -1.15
UPF1-213ENST00000601981 SLC39A9Q9NUM3 307 aa7.85□□□□□ -1.15
UPF1-213ENST00000601981 THYN1Q9P016 225 aa7.85□□□□□ -1.15
UPF1-213ENST00000601981 SLC45A2Q9UMX9 530 aa7.85□□□□□ -1.15
UPF1-213ENST00000601981 IGKV1OR2-108A0A075B7D4 117 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 A0A1B0GV50 99 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 A0A1W2PRX2 142 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 RBFOX3A6NFN3 312 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 BRI3O95415 125 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 RPLP1P05386 114 aaKnown RBP7.84□□□□□ -1.15
UPF1-213ENST00000601981 CDX1P47902 265 aaPredicted RBP7.84□□□□□ -1.15
UPF1-213ENST00000601981 CDC34P49427 236 aaPredicted RBP7.84□□□□□ -1.15
UPF1-213ENST00000601981 CCL20P78556 96 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 NSUN5P1Q3KNT7 163 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 ZNF506Q5JVG8 444 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 FAM209BQ5JX69 171 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 C10orf91Q5T1B1 145 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 ASPHD1Q5U4P2 390 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 FAM122CQ6P4D5 195 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 LCN15Q6UWW0 184 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 KLHL30-AS1Q8NEE0 82 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 MISP3Q96FF7 219 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 ACY3Q96HD9 319 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 USMG5Q96IX5 58 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 UBE2E2Q96LR5 201 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 SEC11CQ9BY50 192 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 TMEM231Q9H6L2 316 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 SLC25A22Q9H936 323 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 CARHSP1Q9Y2V2 147 aaKnown RBP7.84□□□□□ -1.15
UPF1-213ENST00000601981 WNK1Q9H4A3 2382 aa7.84□□□□□ -1.15
UPF1-213ENST00000601981 LOC102723971A0A1B0GUV8 181 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 FAM223BA6NKX1 122 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 IFNA1P01562 189 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 SFTA3P0C7M3 94 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 LINC00869P0C866 280 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 OR10J1P30954 320 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 TAGLN2P37802 199 aaKnown RBP7.83□□□□□ -1.16
UPF1-213ENST00000601981 SELENOTP62341 195 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 MLANAQ16655 118 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 TCTEX1D4Q5JR98 221 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 CYP2G1PQ6ZSU1 146 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 FAM223AQ8IWN6 122 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 NECAP1Q8NC96 275 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 TMEM116Q8NCL8 245 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 C4orf3Q8WVX3 66 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 RAB24Q969Q5 203 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 MS4A10Q96PG2 267 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 EIF5A2Q9GZV4 153 aaKnown RBP7.83□□□□□ -1.16
UPF1-213ENST00000601981 DMRT1Q9Y5R6 373 aa7.83□□□□□ -1.16
UPF1-213ENST00000601981 A0A1W2PPV4 95 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 C9JQL5 133 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 F8W036 122 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 I3L2K1 104 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 NDUFS6O75380 124 aaKnown RBP7.82□□□□□ -1.16
UPF1-213ENST00000601981 MT-CO2P00403 227 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 PF4P02776 101 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 HSPB1P04792 205 aaKnown RBP7.82□□□□□ -1.16
UPF1-213ENST00000601981 BCL2P10415 239 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 ADCYAP1P18509 176 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 PPT1P50897 306 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 RND2P52198 227 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 FGF8P55075 233 aaPredicted RBP7.82□□□□□ -1.16
UPF1-213ENST00000601981 RHOBP62745 196 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 ICAM4Q14773 271 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 KHDC3LQ587J8 217 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 GCSAMLQ5JQS6 135 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 C19orf35Q6ZS72 473 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 ZNF491Q8N8L2 437 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 MYOZ3Q8TDC0 251 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 NPIPB3Q92617 1050 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 RNF2Q99496 336 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 TRGV9Q99603 122 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 SLC35B3Q9H1N7 401 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 KLK15Q9H2R5 256 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 MANBALQ9NQG1 85 aa7.82□□□□□ -1.16
UPF1-213ENST00000601981 IGLV11-55A0A075B6I3 123 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 IGKV1D-37A0A075B6S9 117 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 APOC3P02656 99 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 LGALS1P09382 135 aaKnown RBP7.81□□□□□ -1.16
UPF1-213ENST00000601981 STAG3L2P0CL84 134 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 STAG3L3P0CL85 134 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 PSMB3P49720 205 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 RHOGP84095 191 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 ATP5G2Q06055 141 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 HAGHQ16775 308 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 KLK9Q2XQG4 91 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 LCNL1Q6ZST4 164 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 MRPL36Q9P0J6 103 aaKnown RBP7.81□□□□□ -1.16
UPF1-213ENST00000601981 GNG13Q9P2W3 67 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 FBXL7Q9UJT9 491 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 KLK9Q9UKQ9 250 aa7.81□□□□□ -1.16
UPF1-213ENST00000601981 TRBV9A0A0B4J1U6 114 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 ZFP92A6NM28 416 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 K7EIM0 57 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms