RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 MPDU1O75352 247 aa12.73□□□□□ -0.37
USHBP1-210ENST00000600286 IFNA5P01569 189 aa12.73□□□□□ -0.37
USHBP1-210ENST00000600286 PSG1P11464 419 aa12.73□□□□□ -0.37
USHBP1-210ENST00000600286 FOLR2P14207 255 aa12.73□□□□□ -0.37
USHBP1-210ENST00000600286 AP2S1P53680 142 aaPredicted RBP12.73□□□□□ -0.37
USHBP1-210ENST00000600286 TM4SF20Q53R12 229 aa12.73□□□□□ -0.37
USHBP1-210ENST00000600286 UNQ9165/PRO28630Q6UXU0 137 aa12.73□□□□□ -0.37
USHBP1-210ENST00000600286 TECRQ9NZ01 308 aaKnown RBP12.73□□□□□ -0.37
USHBP1-210ENST00000600286 IL4P05112 153 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 CSN3P07498 182 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 CBLN1P23435 193 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 ZNF90Q03938 601 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 OR2F1Q13607 317 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 CLINT1Q14677 625 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 CYP2G1PQ6ZSU1 146 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 AKAP14Q86UN6 197 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 ZNF709Q8N972 641 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 SCGB1C1Q8TD33 95 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 PBDC1Q9BVG4 233 aa12.72□□□□□ -0.37
USHBP1-210ENST00000600286 IGKV1D-37A0A075B6S9 117 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 IGHV3OR16-8A0A075B7F1 116 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 UBE2L5PA0A1B0GUS4 154 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 ZNF207O43670 478 aaKnown RBP12.71□□□□□ -0.37
USHBP1-210ENST00000600286 CAMLGP49069 296 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 VWC2Q2TAL6 325 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 OXLD1Q5BKU9 147 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 Q5BKY6 102 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 LAMTOR1Q6IAA8 161 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 BTNL8Q6UX41 500 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 PPP1R14BQ96C90 147 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 GRAMD2BQ96HH9 432 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 AQP10Q96PS8 301 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 ATP5SQ99766 215 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 RABAC1Q9UI14 185 aa12.71□□□□□ -0.37
USHBP1-210ENST00000600286 IGHV7-4-1A0A0J9YVY3 117 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 TMEM213A2RRL7 107 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 CD5P06127 495 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 HNRNPCP07910 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
USHBP1-210ENST00000600286 FGF7P21781 194 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 LYZP61626 148 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 Q6ZRG5 221 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 OR2K2Q8NGT1 345 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 RNF125Q96EQ8 232 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 ZFAND3Q9H8U3 227 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 KCNIP2Q9NS61 270 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 SMPXQ9UHP9 88 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
USHBP1-210ENST00000600286 IGKV1OR2-108A0A075B7D4 117 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 WI2-2373I1.2A0A1W2PRP0 233 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 C17orf112F2Z3M2 114 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 AGPAT2O15120 278 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 C8orf88P0DMB2 117 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 EIF2B2P49770 351 aaKnown RBP12.69□□□□□ -0.38
USHBP1-210ENST00000600286 ZNF266Q14584 549 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 PXDC1Q5TGL8 231 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 IL34Q6ZMJ4 242 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 RBPMS2Q6ZRY4 209 aaKnown RBP12.69□□□□□ -0.38
USHBP1-210ENST00000600286 RHPN1-AS1Q9BWJ2 59 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 SMIM3Q9BZL3 60 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 MFFQ9GZY8 342 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 TNFSF18Q9UNG2 199 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 RNF24Q9Y225 148 aa12.69□□□□□ -0.38
USHBP1-210ENST00000600286 LSM4Q9Y4Z0 139 aaKnown RBP12.69□□□□□ -0.38
USHBP1-210ENST00000600286 ARPC5O15511 151 aa12.68□□□□□ -0.38
USHBP1-210ENST00000600286 ORM2P19652 201 aa12.68□□□□□ -0.38
USHBP1-210ENST00000600286 LCN12Q6JVE5 192 aa12.68□□□□□ -0.38
USHBP1-210ENST00000600286 TCTE3Q8IZS6 198 aa12.68□□□□□ -0.38
USHBP1-210ENST00000600286 TGP01266 2768 aa12.68□□□□□ -0.38
USHBP1-210ENST00000600286 NOTCH1P46531 2555 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 BORCS7-ASMTA0A0B4J1R7 106 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 HMSDA8MTL9 139 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 G3V4G9 280 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 SMLR1H3BR10 107 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 HYPMO75409 117 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 IGLV1-51P01701 117 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 LINC00869P0C866 280 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 CRYBB3P26998 211 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 SAMD5Q5TGI4 173 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 OR1B1Q8NGR6 318 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 ST6GAL2Q96JF0 529 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 SLC45A2Q9UMX9 530 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 NOTCH3Q9UM47 2321 aa12.67□□□□□ -0.38
USHBP1-210ENST00000600286 TRAV25A0A0B4J276 109 aa12.66□□□□□ -0.38
USHBP1-210ENST00000600286 CHEK1O14757 476 aa12.66□□□□□ -0.38
USHBP1-210ENST00000600286 TAAR5O14804 337 aa12.66□□□□□ -0.38
USHBP1-210ENST00000600286 OR5G3P0C626 314 aa12.66□□□□□ -0.38
USHBP1-210ENST00000600286 GATA2P23769 480 aaPredicted RBP12.66□□□□□ -0.38
USHBP1-210ENST00000600286 RPL29P47914 159 aaKnown RBP12.66□□□□□ -0.38
USHBP1-210ENST00000600286 PAFAH1B2P68402 229 aa12.66□□□□□ -0.38
USHBP1-210ENST00000600286 OR1L4Q8NGR5 311 aa12.66□□□□□ -0.38
USHBP1-210ENST00000600286 MGST2Q99735 147 aa12.66□□□□□ -0.38
USHBP1-210ENST00000600286 WDR61Q9GZS3 305 aaKnown RBP12.66□□□□□ -0.38
USHBP1-210ENST00000600286 ARL6Q9H0F7 186 aa12.66□□□□□ -0.38
USHBP1-210ENST00000600286 FBXL17Q9UF56 701 aa12.66□□□□□ -0.38
USHBP1-210ENST00000600286 ELOA3CA0A087WX78 387 aaPredicted RBP12.65□□□□□ -0.38
USHBP1-210ENST00000600286 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.38
USHBP1-210ENST00000600286 A0A0D9SG52 128 aa12.65□□□□□ -0.38
USHBP1-210ENST00000600286 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
USHBP1-210ENST00000600286 USF2Q15853 346 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms