RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PRRX1P54821 245 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 PDPNQ86YL7 162 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 USP9YO00507 2555 aaPredicted RBP9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 CSPG4Q6UVK1 2322 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 A0A1W2PN81 502 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 CA7P43166 264 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 CAMPP49913 170 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 LYZP61626 148 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 PRR20EP86478 221 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 PRR20CP86479 221 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 PRR20DP86480 221 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 PRR20BP86481 221 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 PRR20AP86496 221 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 TIGITQ495A1 244 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 C2orf83Q53S99 150 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 Q6ZN92 141 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 OR8B3Q8NGG8 313 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 RAB1CQ92928 201 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 OR8B2Q96RD0 313 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 NEU1Q99519 415 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 TNFRSF19Q9NS68 423 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM242Q9NWH2 141 aa9.29□□□□□ -0.92
ARHGEF1-220ENST00000600274 NCBP2LA6PVI3 153 aaKnown RBP9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 C8orf88P0DMB2 117 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 NHLH1Q02575 133 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 AARDQ4LEZ3 155 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 GBGT1Q8N5D6 347 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 CLEC7AQ9BXN2 247 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 GGTLC3B5MD39 225 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 K7EN84 100 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM177Q53S58 311 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 LINC00305Q7Z4B0 112 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 C22orf15Q8WYQ4 148 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 ASCL2Q99929 193 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 UBTD1Q9HAC8 227 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 ZNF586Q9NXT0 402 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 DIRC3C9JPN6 131 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 KLRB1Q12918 225 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 POU2AF1Q16633 256 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 PAXXQ9BUH6 204 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 NCOR1P1Q9H4R4 102 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM167BQ9NRX6 74 aa9.28□□□□□ -0.92
ARHGEF1-220ENST00000600274 IGHV3OR16-8A0A075B7F1 116 aa9.27□□□□□ -0.92
ARHGEF1-220ENST00000600274 IGHV1-3A0A0C4DH29 117 aa9.27□□□□□ -0.92
ARHGEF1-220ENST00000600274 IGHV3-35A0A0C4DH35 117 aa9.27□□□□□ -0.92
ARHGEF1-220ENST00000600274 C22orf46C9J442 243 aa9.27□□□□□ -0.92
ARHGEF1-220ENST00000600274 TIMM23O14925 209 aa9.27□□□□□ -0.92
ARHGEF1-220ENST00000600274 VENTXO95231 258 aa9.27□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM183BQ1AE95 376 aa9.27□□□□□ -0.92
ARHGEF1-220ENST00000600274 TMEM167AQ8TBQ9 72 aa9.27□□□□□ -0.92
ARHGEF1-220ENST00000600274 ITPR1Q14643 2758 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 CELSR1Q9NYQ6 3014 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 CGB1A6NKQ9 187 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 ZNF503Q96F45 646 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 RAB1BQ9H0U4 201 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 FLNCQ14315 2725 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 DLEU1O43261 78 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 IGHV3-23P01764 117 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 MC5RP33032 325 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 TCTAP57738 103 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 ADORA2A-AS1P86434 159 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 BORCS7Q96B45 105 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 TIMD4Q96H15 378 aa9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 EAF1Q96JC9 268 aaPredicted RBP9.27□□□□□ -0.93
ARHGEF1-220ENST00000600274 SRP14P37108 136 aaKnown RBP9.26□□□□□ -0.93
ARHGEF1-220ENST00000600274 HNRNPA3P51991 378 aaKnown RBP9.26□□□□□ -0.93
ARHGEF1-220ENST00000600274 ST6GALNAC6Q969X2 333 aa9.26□□□□□ -0.93
ARHGEF1-220ENST00000600274 BUB1B-PAK6H3BSN5 160 aa9.26□□□□□ -0.93
ARHGEF1-220ENST00000600274 IGLV2-23P01705 113 aa9.26□□□□□ -0.93
ARHGEF1-220ENST00000600274 SLC25A5P05141 298 aaKnown RBP9.26□□□□□ -0.93
ARHGEF1-220ENST00000600274 ACTL10Q5JWF8 245 aa9.26□□□□□ -0.93
ARHGEF1-220ENST00000600274 PPP1R27Q86WC6 154 aa9.26□□□□□ -0.93
ARHGEF1-220ENST00000600274 Q56UQ5 140 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 MMD2Q8IY49 270 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 RNASE8Q8TDE3 154 aaKnown RBP9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 LINC00574Q9H8X3 128 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 LRRK2Q5S007 2527 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 LCN2P80188 198 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 TMEM30BQ3MIR4 351 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 CRYBG3Q68DQ2 2970 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 CREBBPQ92793 2442 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 C20orf202A1L168 122 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 RAB4AP20338 218 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 SRIP30626 198 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 LCN12Q6JVE5 192 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 SRSF12Q8WXF0 261 aaKnown RBP9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 SIGLEC9Q9Y336 463 aa9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 AMMECR1Q9Y4X0 333 aaPredicted RBP9.25□□□□□ -0.93
ARHGEF1-220ENST00000600274 PGPA6NDG6 321 aa9.24□□□□□ -0.93
ARHGEF1-220ENST00000600274 MFAP2P55001 183 aa9.24□□□□□ -0.93
ARHGEF1-220ENST00000600274 DLX6P56179 175 aa9.24□□□□□ -0.93
ARHGEF1-220ENST00000600274 RPL19P84098 196 aaKnown RBP9.24□□□□□ -0.93
ARHGEF1-220ENST00000600274 VAMP3Q15836 100 aa9.24□□□□□ -0.93
ARHGEF1-220ENST00000600274 SPATA45Q537H7 98 aa9.24□□□□□ -0.93
ARHGEF1-220ENST00000600274 RNASEKQ6P5S7 137 aaKnown RBP9.24□□□□□ -0.93
ARHGEF1-220ENST00000600274 IGHV3OR16-10A0A075B7F0 116 aa9.24□□□□□ -0.93
ARHGEF1-220ENST00000600274 HSBP1O75506 76 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms