RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 KLK5Q9Y337 293 aaPredicted RBP16.84■□□□□ 0.29
SSBP4-205ENST00000598159 AGRNO00468 2067 aa16.84■□□□□ 0.29
SSBP4-205ENST00000598159 PPP1R1AQ13522 171 aa16.83■□□□□ 0.28
SSBP4-205ENST00000598159 MORN3Q6PF18 240 aaPredicted RBP16.83■□□□□ 0.28
SSBP4-205ENST00000598159 TRPT1Q86TN4 253 aaKnown RBP16.83■□□□□ 0.28
SSBP4-205ENST00000598159 SLC35E1Q96K37 410 aa16.83■□□□□ 0.28
SSBP4-205ENST00000598159 SRRQ9GZT4 340 aa16.83■□□□□ 0.28
SSBP4-205ENST00000598159 SEPSECSQ9HD40 501 aaKnown RBP16.83■□□□□ 0.28
SSBP4-205ENST00000598159 DNAH1Q9P2D7 4330 aa16.82■□□□□ 0.28
SSBP4-205ENST00000598159 ZFP92A6NM28 416 aa16.82■□□□□ 0.28
SSBP4-205ENST00000598159 FABP1P07148 127 aa16.82■□□□□ 0.28
SSBP4-205ENST00000598159 SPP1P10451 314 aa16.82■□□□□ 0.28
SSBP4-205ENST00000598159 NUP62P37198 522 aaPredicted RBP16.82■□□□□ 0.28
SSBP4-205ENST00000598159 INPP1P49441 399 aa16.82■□□□□ 0.28
SSBP4-205ENST00000598159 UBE2MP61081 183 aaKnown RBP16.82■□□□□ 0.28
SSBP4-205ENST00000598159 RPP30P78346 268 aaKnown RBP16.82■□□□□ 0.28
SSBP4-205ENST00000598159 RNF125Q96EQ8 232 aa16.82■□□□□ 0.28
SSBP4-205ENST00000598159 CIB3Q96Q77 187 aaPredicted RBP16.82■□□□□ 0.28
SSBP4-205ENST00000598159 C11orf68Q9H3H3 251 aaKnown RBP16.82■□□□□ 0.28
SSBP4-205ENST00000598159 NAP1L6A6NFF2 107 aa16.81■□□□□ 0.28
SSBP4-205ENST00000598159 SNRPD3P62318 126 aaKnown RBP16.81■□□□□ 0.28
SSBP4-205ENST00000598159 OR8G2PQ6IF36 304 aa16.81■□□□□ 0.28
SSBP4-205ENST00000598159 SIGLEC15Q6ZMC9 328 aa16.81■□□□□ 0.28
SSBP4-205ENST00000598159 RAB40CQ96S21 281 aa16.81■□□□□ 0.28
SSBP4-205ENST00000598159 KNCNA6PVL3 124 aa16.8■□□□□ 0.28
SSBP4-205ENST00000598159 IAPPP10997 89 aa16.8■□□□□ 0.28
SSBP4-205ENST00000598159 NRN1Q9NPD7 142 aa16.8■□□□□ 0.28
SSBP4-205ENST00000598159 IGKV1D-37A0A075B6S9 117 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 SNRPGP15A8MWD9 76 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 SYNGR2O43760 224 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 HOXB5P09067 269 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 ZNF90Q03938 601 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 BAK1Q16611 211 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 PSMG4Q5JS54 123 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 ACTL10Q5JWF8 245 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 C11orf45Q8TAV5 145 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 PHLDA1Q8WV24 401 aaPredicted RBP16.79■□□□□ 0.28
SSBP4-205ENST00000598159 PBDC1Q9BVG4 233 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 MFFQ9GZY8 342 aa16.79■□□□□ 0.28
SSBP4-205ENST00000598159 PAIP2BQ9ULR5 123 aaKnown RBP16.79■□□□□ 0.28
SSBP4-205ENST00000598159 GIG44P09565 113 aaPredicted RBP16.78■□□□□ 0.28
SSBP4-205ENST00000598159 GGNBP1Q5YKI7 109 aa16.78■□□□□ 0.28
SSBP4-205ENST00000598159 TRIQKQ629K1 86 aa16.78■□□□□ 0.28
SSBP4-205ENST00000598159 LINC00476Q8WZB0 136 aa16.78■□□□□ 0.28
SSBP4-205ENST00000598159 TRGV9Q99603 122 aa16.78■□□□□ 0.28
SSBP4-205ENST00000598159 HYDINQ4G0P3 5121 aa16.77■□□□□ 0.28
SSBP4-205ENST00000598159 NDUFB6O95139 128 aa16.77■□□□□ 0.28
SSBP4-205ENST00000598159 MAGT1Q9H0U3 335 aa16.77■□□□□ 0.28
SSBP4-205ENST00000598159 C9orf170A2RU37 121 aa16.76■□□□□ 0.27
SSBP4-205ENST00000598159 WRBO00258 174 aa16.76■□□□□ 0.27
SSBP4-205ENST00000598159 LY6G6CO95867 125 aa16.76■□□□□ 0.27
SSBP4-205ENST00000598159 C1orf194Q5T5A4 169 aa16.76■□□□□ 0.27
SSBP4-205ENST00000598159 FBXL17Q9UF56 701 aa16.76■□□□□ 0.27
SSBP4-205ENST00000598159 CENPXA8MT69 81 aa16.75■□□□□ 0.27
SSBP4-205ENST00000598159 CFDP00746 253 aaPredicted RBP16.75■□□□□ 0.27
SSBP4-205ENST00000598159 NUTF2P61970 127 aaKnown RBP16.75■□□□□ 0.27
SSBP4-205ENST00000598159 THAP8Q8NA92 274 aa16.75■□□□□ 0.27
SSBP4-205ENST00000598159 MIFP14174 115 aa16.74■□□□□ 0.27
SSBP4-205ENST00000598159 NANOS2P60321 138 aaKnown RBP16.74■□□□□ 0.27
SSBP4-205ENST00000598159 LYZP61626 148 aa16.74■□□□□ 0.27
SSBP4-205ENST00000598159 ID3Q02535 119 aa16.74■□□□□ 0.27
SSBP4-205ENST00000598159 COQ8AQ8NI60 647 aa16.74■□□□□ 0.27
SSBP4-205ENST00000598159 C7orf50Q9BRJ6 194 aaKnown RBP16.74■□□□□ 0.27
SSBP4-205ENST00000598159 DEFB4AO15263 64 aa16.73■□□□□ 0.27
SSBP4-205ENST00000598159 IFNA21P01568 189 aa16.73■□□□□ 0.27
SSBP4-205ENST00000598159 OR4E1P0C645 316 aa16.73■□□□□ 0.27
SSBP4-205ENST00000598159 NKX2-1P43699 371 aaPredicted RBP16.73■□□□□ 0.27
SSBP4-205ENST00000598159 OR2F1Q13607 317 aa16.73■□□□□ 0.27
SSBP4-205ENST00000598159 SPANXN5Q5MJ07 72 aa16.73■□□□□ 0.27
SSBP4-205ENST00000598159 Q8NAQ8 132 aa16.73■□□□□ 0.27
SSBP4-205ENST00000598159 SDHCQ99643 169 aaPredicted RBP16.73■□□□□ 0.27
SSBP4-205ENST00000598159 FLVCR2Q9UPI3 526 aa16.73■□□□□ 0.27
SSBP4-205ENST00000598159 STRAPQ9Y3F4 350 aaKnown RBP16.73■□□□□ 0.27
SSBP4-205ENST00000598159 IGKV1OR2-108A0A075B7D4 117 aa16.72■□□□□ 0.27
SSBP4-205ENST00000598159 ZNF705EA8MWA4 302 aaPredicted RBP16.72■□□□□ 0.27
SSBP4-205ENST00000598159 PRSS46E5RG02 174 aa16.72■□□□□ 0.27
SSBP4-205ENST00000598159 H3BMM0 161 aa16.72■□□□□ 0.27
SSBP4-205ENST00000598159 C4BPBP20851 252 aa16.72■□□□□ 0.27
SSBP4-205ENST00000598159 ID1P41134 155 aa16.72■□□□□ 0.27
SSBP4-205ENST00000598159 CNPY1Q3B7I2 92 aa16.72■□□□□ 0.27
SSBP4-205ENST00000598159 CSNK1G2-AS1Q8NCQ2 148 aa16.72■□□□□ 0.27
SSBP4-205ENST00000598159 PPP1R14BQ96C90 147 aa16.72■□□□□ 0.27
SSBP4-205ENST00000598159 C1QTNF4Q9BXJ3 329 aa16.72■□□□□ 0.27
SSBP4-205ENST00000598159 LINC00854A0A1B0GVQ3 168 aa16.71■□□□□ 0.27
SSBP4-205ENST00000598159 ADAP1O75689 374 aa16.71■□□□□ 0.27
SSBP4-205ENST00000598159 HRH4Q9H3N8 390 aa16.71■□□□□ 0.27
SSBP4-205ENST00000598159 NDUFA13Q9P0J0 144 aa16.71■□□□□ 0.27
SSBP4-205ENST00000598159 PLECQ15149 4684 aaKnown RBP16.7■□□□□ 0.26
SSBP4-205ENST00000598159 OR8I2Q8N0Y5 310 aa16.7■□□□□ 0.26
SSBP4-205ENST00000598159 CLEC5AQ9NY25 188 aa16.7■□□□□ 0.26
SSBP4-205ENST00000598159 TBC1D24Q9ULP9 559 aa16.7■□□□□ 0.26
SSBP4-205ENST00000598159 SLC45A2Q9UMX9 530 aa16.7■□□□□ 0.26
SSBP4-205ENST00000598159 IGHV4-28A0A0C4DH34 117 aa16.69■□□□□ 0.26
SSBP4-205ENST00000598159 RBMY1A1P0DJD3 496 aaKnown RBP16.69■□□□□ 0.26
SSBP4-205ENST00000598159 RBMY1CP0DJD4 496 aa16.69■□□□□ 0.26
SSBP4-205ENST00000598159 HLA-DRB4P13762 266 aa16.69■□□□□ 0.26
SSBP4-205ENST00000598159 S100A7P31151 101 aa16.69■□□□□ 0.26
SSBP4-205ENST00000598159 RBMY1FQ15415 496 aaKnown RBP16.69■□□□□ 0.26
SSBP4-205ENST00000598159 OR4D5Q8NGN0 318 aa16.69■□□□□ 0.26
SSBP4-205ENST00000598159 PSENENQ9NZ42 101 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms