RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 UCP3P55916 312 aa7.06□□□□□ -1.28
TRIM28-210ENST00000597618 TMEM69Q5SWH9 247 aa7.06□□□□□ -1.28
TRIM28-210ENST00000597618 RNASEH2CQ8TDP1 164 aaKnown RBP7.06□□□□□ -1.28
TRIM28-210ENST00000597618 RNF141Q8WVD5 230 aa7.06□□□□□ -1.28
TRIM28-210ENST00000597618 S100A16Q96FQ6 103 aaKnown RBP7.06□□□□□ -1.28
TRIM28-210ENST00000597618 IGF2BP2-AS1Q96M15 143 aa7.06□□□□□ -1.28
TRIM28-210ENST00000597618 WDR12Q9GZL7 423 aaKnown RBP7.06□□□□□ -1.28
TRIM28-210ENST00000597618 KLK11Q9UBX7 282 aa7.06□□□□□ -1.28
TRIM28-210ENST00000597618 A0A0J9YX75 114 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 F6UB75 175 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 ISLRO14498 428 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 SOCS3O14543 225 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 TMEM127O75204 238 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 CLEC2LP0C7M8 214 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 HLA-DMAP28067 261 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 TSPOP30536 169 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 SAMD13Q5VXD3 122 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 OR8G2PQ6IF36 304 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 ETFRF1Q6IPR1 90 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 GPR146Q96CH1 333 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 ABHD1Q96SE0 405 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 HMCN2Q8NDA2 5059 aa7.05□□□□□ -1.28
TRIM28-210ENST00000597618 CBY3A6NI87 242 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 ZNF705GA8MUZ8 300 aaPredicted RBP7.04□□□□□ -1.28
TRIM28-210ENST00000597618 INSP01308 110 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 PRSS3P35030 304 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 XGP55808 180 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 SPCS3P61009 180 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 RND3P61587 244 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 B2MP61769 119 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 DLK1P80370 383 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 C2orf83Q53S99 150 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 UBE2NLQ5JXB2 153 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 CDPF1Q6NVV7 123 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 LYSMD2Q8IV50 215 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 OR51G1Q8NGK1 321 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 FCGR1BQ92637 280 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 RNF125Q96EQ8 232 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 RRNAD1Q96FB5 475 aaKnown RBP7.04□□□□□ -1.28
TRIM28-210ENST00000597618 ACY3Q96HD9 319 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 UPK3BQ9BT76 320 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 HEYLQ9NQ87 328 aaPredicted RBP7.04□□□□□ -1.28
TRIM28-210ENST00000597618 RPRMQ9NS64 109 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 DOK5Q9P104 306 aa7.04□□□□□ -1.28
TRIM28-210ENST00000597618 A8MTW9 85 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 EREGO14944 169 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 PSG1P11464 419 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 PGAM2P15259 253 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 RCVRNP35243 200 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 GABARAPL2P60520 117 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 SUPT4H1P63272 117 aaKnown RBP7.03□□□□□ -1.28
TRIM28-210ENST00000597618 TRIM16LQ309B1 348 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 AARDQ4LEZ3 155 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 C1orf194Q5T5A4 169 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 SLC24A4Q8NFF2 622 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 OR52E5Q8NH55 327 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 RNASE11Q8TAA1 199 aaKnown RBP7.03□□□□□ -1.28
TRIM28-210ENST00000597618 NPIPB3Q92617 1050 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 ZNF486Q96H40 463 aaPredicted RBP7.03□□□□□ -1.28
TRIM28-210ENST00000597618 TP53RKQ96S44 253 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 PBDC1Q9BVG4 233 aa7.03□□□□□ -1.28
TRIM28-210ENST00000597618 LOC100506127A0A0U1RQW1 187 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 C3orf85A0A1B0GTC6 90 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 PLAC8L1A1L4L8 177 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 J3QL48 77 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 MEOX2P50222 304 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 PIGPP57054 158 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 AMTNQ6UX39 209 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 NOXA1Q86UR1 476 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 NRG4Q8WWG1 115 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 ZNF503Q96F45 646 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 CNBD2Q96M20 576 aa7.02□□□□□ -1.29
TRIM28-210ENST00000597618 A0A0G2JRQ6 117 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 M0R2Z0 102 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 NXPH3O95157 252 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 PRM2P04554 102 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 PI3P19957 117 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 LINC00315P59091 139 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 ERVFC1-1P60608 527 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 FCN2Q15485 313 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 SPINK13Q1W4C9 94 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 CROCCP3Q8IVE0 287 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 FAM219AQ8IW50 185 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 SPARTQ8N0X7 666 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 SAMD12Q8N8I0 201 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 GPX8Q8TED1 209 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 GNPNAT1Q96EK6 184 aaPredicted RBP7.01□□□□□ -1.29
TRIM28-210ENST00000597618 C16orf92Q96LL3 132 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.01□□□□□ -1.29
TRIM28-210ENST00000597618 ZNF586Q9NXT0 402 aa7.01□□□□□ -1.29
TRIM28-210ENST00000597618 MRPS16Q9Y3D3 137 aaKnown RBP7.01□□□□□ -1.29
TRIM28-210ENST00000597618 TRAV26-1A0A087WT03 109 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 CEBPZOSA8MTT3 80 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 CRXO43186 299 aaPredicted RBP7□□□□□ -1.29
TRIM28-210ENST00000597618 B3GALNT1O75752 331 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 DUSP14O95147 198 aaKnown RBP7□□□□□ -1.29
TRIM28-210ENST00000597618 IFNA5P01569 189 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 FABP1P07148 127 aa7□□□□□ -1.29
TRIM28-210ENST00000597618 M6PRP20645 277 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms