RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 SYNGR2O43760 224 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 YIF1AO95070 293 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 TMEM50AO95807 157 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 IAPPP10997 89 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 BMI1P35226 326 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 ID3Q02535 119 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 APRG1Q8IVJ8 170 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 KIR2DL5AQ8N109 375 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 TMEM116Q8NCL8 245 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 OR4D5Q8NGN0 318 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 KIR2DL5BQ8NHK3 375 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 LINC00476Q8WZB0 136 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 RNF183Q96D59 192 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 OR10C1Q96KK4 312 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 SEC22CQ9BRL7 303 aa11.19□□□□□ -0.62
TGFB1-202ENST00000597453 IGKV3-7A0A075B6H7 116 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 IGHV3OR16-13A0A075B7E8 117 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 TRAV30A0A087WSZ9 112 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 IGHV3-74A0A0B4J1X5 117 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 NKX2-1P43699 371 aaPredicted RBP11.18□□□□□ -0.62
TGFB1-202ENST00000597453 TFPI2P48307 235 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 RND2P52198 227 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 NKX2-5P52952 324 aaPredicted RBP11.18□□□□□ -0.62
TGFB1-202ENST00000597453 IAH1Q2TAA2 248 aaPredicted RBP11.18□□□□□ -0.62
TGFB1-202ENST00000597453 PRSS54Q6PEW0 395 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 STPG3Q8N7X2 389 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 MAGT1Q9H0U3 335 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 MAP6D1Q9H9H5 199 aa11.18□□□□□ -0.62
TGFB1-202ENST00000597453 WRBO00258 174 aa11.17□□□□□ -0.62
TGFB1-202ENST00000597453 PRAF2O60831 178 aa11.17□□□□□ -0.62
TGFB1-202ENST00000597453 IFNA4P05014 189 aa11.17□□□□□ -0.62
TGFB1-202ENST00000597453 IL5P05113 134 aa11.17□□□□□ -0.62
TGFB1-202ENST00000597453 RPP30P78346 268 aaKnown RBP11.17□□□□□ -0.62
TGFB1-202ENST00000597453 FAM90A2PQ658T7 463 aa11.17□□□□□ -0.62
TGFB1-202ENST00000597453 ZNF600Q6ZNG1 722 aa11.17□□□□□ -0.62
TGFB1-202ENST00000597453 OR1S2Q8NGQ3 325 aa11.17□□□□□ -0.62
TGFB1-202ENST00000597453 TRAV14DV4A0A0A6YYC5 116 aa11.16□□□□□ -0.62
TGFB1-202ENST00000597453 IGKV1-17P01599 117 aa11.16□□□□□ -0.62
TGFB1-202ENST00000597453 IGLC1P0CG04 106 aa11.16□□□□□ -0.62
TGFB1-202ENST00000597453 RAB11AP62491 216 aa11.16□□□□□ -0.62
TGFB1-202ENST00000597453 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
TGFB1-202ENST00000597453 C12orf45Q8N5I9 185 aaPredicted RBP11.16□□□□□ -0.62
TGFB1-202ENST00000597453 HYLS1Q96M11 299 aa11.16□□□□□ -0.62
TGFB1-202ENST00000597453 GINS3Q9BRX5 216 aa11.16□□□□□ -0.62
TGFB1-202ENST00000597453 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
TGFB1-202ENST00000597453 PUS1Q9Y606 427 aaKnown RBP eCLIP11.16□□□□□ -0.62
TGFB1-202ENST00000597453 DNAH10Q8IVF4 4471 aa11.15□□□□□ -0.62
TGFB1-202ENST00000597453 NUPR2A6NF83 97 aa11.15□□□□□ -0.62
TGFB1-202ENST00000597453 CCSO14618 274 aa11.15□□□□□ -0.62
TGFB1-202ENST00000597453 APOHP02749 345 aaPredicted RBP11.15□□□□□ -0.62
TGFB1-202ENST00000597453 OR10J1P30954 320 aa11.15□□□□□ -0.62
TGFB1-202ENST00000597453 GPX4P36969 197 aaPredicted RBP11.15□□□□□ -0.62
TGFB1-202ENST00000597453 POLR2GP62487 172 aaKnown RBP eCLIP11.15□□□□□ -0.62
TGFB1-202ENST00000597453 CEMP1Q6PRD7 247 aaPredicted RBP11.15□□□□□ -0.62
TGFB1-202ENST00000597453 LILRB2Q8N423 598 aa11.15□□□□□ -0.62
TGFB1-202ENST00000597453 GBGT1Q8N5D6 347 aa11.15□□□□□ -0.62
TGFB1-202ENST00000597453 NPIPB3Q92617 1050 aa11.15□□□□□ -0.62
TGFB1-202ENST00000597453 ACY3Q96HD9 319 aa11.15□□□□□ -0.62
TGFB1-202ENST00000597453 MED28Q9H204 178 aa11.15□□□□□ -0.62
TGFB1-202ENST00000597453 GPN1Q9HCN4 374 aaPredicted RBP11.15□□□□□ -0.62
TGFB1-202ENST00000597453 H3BP45 60 aa11.14□□□□□ -0.63
TGFB1-202ENST00000597453 SSSCA1O60232 199 aa11.14□□□□□ -0.63
TGFB1-202ENST00000597453 LY6G6CO95867 125 aa11.14□□□□□ -0.63
TGFB1-202ENST00000597453 SCGB1D2O95969 90 aa11.14□□□□□ -0.63
TGFB1-202ENST00000597453 YPEL3P61236 119 aaPredicted RBP11.14□□□□□ -0.63
TGFB1-202ENST00000597453 TIGITQ495A1 244 aa11.14□□□□□ -0.63
TGFB1-202ENST00000597453 SPANXN5Q5MJ07 72 aa11.14□□□□□ -0.63
TGFB1-202ENST00000597453 ST8SIA2Q92186 375 aa11.14□□□□□ -0.63
TGFB1-202ENST00000597453 SLC35E1Q96K37 410 aa11.14□□□□□ -0.63
TGFB1-202ENST00000597453 GSKIPQ9P0R6 139 aa11.14□□□□□ -0.63
TGFB1-202ENST00000597453 STRAPQ9Y3F4 350 aaKnown RBP11.14□□□□□ -0.63
TGFB1-202ENST00000597453 IGHV3-66A0A0C4DH42 116 aa11.13□□□□□ -0.63
TGFB1-202ENST00000597453 PRSS46E5RG02 174 aa11.13□□□□□ -0.63
TGFB1-202ENST00000597453 ATF4P18848 351 aaPredicted RBP11.13□□□□□ -0.63
TGFB1-202ENST00000597453 GAMTQ14353 236 aa11.13□□□□□ -0.63
TGFB1-202ENST00000597453 ZNF767PQ75MW2 155 aa11.13□□□□□ -0.63
TGFB1-202ENST00000597453 TCF24Q7RTU0 167 aa11.13□□□□□ -0.63
TGFB1-202ENST00000597453 SMIM8Q96KF7 97 aa11.13□□□□□ -0.63
TGFB1-202ENST00000597453 RAB40CQ96S21 281 aa11.13□□□□□ -0.63
TGFB1-202ENST00000597453 CSTL1Q9H114 145 aa11.13□□□□□ -0.63
TGFB1-202ENST00000597453 VSIRQ9H7M9 311 aa11.13□□□□□ -0.63
TGFB1-202ENST00000597453 RCL1Q9Y2P8 373 aaKnown RBP11.13□□□□□ -0.63
TGFB1-202ENST00000597453 C5orf51A6NDU8 294 aa11.12□□□□□ -0.63
TGFB1-202ENST00000597453 SNRPGP15A8MWD9 76 aa11.12□□□□□ -0.63
TGFB1-202ENST00000597453 FAM25EA8MYX2 175 aa11.12□□□□□ -0.63
TGFB1-202ENST00000597453 MBPP02686 304 aaPredicted RBP11.12□□□□□ -0.63
TGFB1-202ENST00000597453 CMC4P56277 68 aaPredicted RBP11.12□□□□□ -0.63
TGFB1-202ENST00000597453 TAS2R30P59541 319 aa11.12□□□□□ -0.63
TGFB1-202ENST00000597453 PSENENQ9NZ42 101 aa11.12□□□□□ -0.63
TGFB1-202ENST00000597453 AGRNO00468 2067 aa11.12□□□□□ -0.63
TGFB1-202ENST00000597453 TSC22D2O75157 780 aa11.11□□□□□ -0.63
TGFB1-202ENST00000597453 DFFBO76075 338 aa11.11□□□□□ -0.63
TGFB1-202ENST00000597453 TOMM40O96008 361 aa11.11□□□□□ -0.63
TGFB1-202ENST00000597453 PAX9P55771 341 aa11.11□□□□□ -0.63
TGFB1-202ENST00000597453 FCN2Q15485 313 aa11.11□□□□□ -0.63
TGFB1-202ENST00000597453 GSG1LQ6UXU4 331 aa11.11□□□□□ -0.63
TGFB1-202ENST00000597453 FAM24BQ8N5W8 94 aa11.11□□□□□ -0.63
TGFB1-202ENST00000597453 TMEM217Q8N7C4 229 aa11.11□□□□□ -0.63
TGFB1-202ENST00000597453 Q8WTZ3 238 aa11.11□□□□□ -0.63
TGFB1-202ENST00000597453 C2orf50Q96LR7 162 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms