RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 EGFEM1PQ0D2K5 195 aa10.89□□□□□ -0.67
VRK3-213ENST00000597215 TEPPQ6URK8 271 aa10.89□□□□□ -0.67
VRK3-213ENST00000597215 OR51G1Q8NGK1 321 aa10.89□□□□□ -0.67
VRK3-213ENST00000597215 OR2K2Q8NGT1 345 aa10.89□□□□□ -0.67
VRK3-213ENST00000597215 OR2T35Q8NGX2 323 aa10.89□□□□□ -0.67
VRK3-213ENST00000597215 IGHV7-4-1A0A0J9YVY3 117 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 CFDP00746 253 aaPredicted RBP10.88□□□□□ -0.67
VRK3-213ENST00000597215 IL4P05112 153 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 NPPCP23582 126 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 VWC2Q2TAL6 325 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 LCN12Q6JVE5 192 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 BTNL8Q6UX41 500 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 CYP2G1PQ6ZSU1 146 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 OR5C1Q8NGR4 320 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 CHAC2Q8WUX2 184 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 RNF125Q96EQ8 232 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 NARS2Q96I59 477 aaKnown RBP10.88□□□□□ -0.67
VRK3-213ENST00000597215 METTL26Q96S19 204 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 SMPXQ9UHP9 88 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 HSPB11Q9Y547 144 aa10.88□□□□□ -0.67
VRK3-213ENST00000597215 UBE2L5PA0A1B0GUS4 154 aa10.87□□□□□ -0.67
VRK3-213ENST00000597215 WI2-2373I1.2A0A1W2PRP0 233 aa10.87□□□□□ -0.67
VRK3-213ENST00000597215 NUP62P37198 522 aaPredicted RBP10.87□□□□□ -0.67
VRK3-213ENST00000597215 SELENOTP62341 195 aa10.87□□□□□ -0.67
VRK3-213ENST00000597215 OR2F1Q13607 317 aa10.87□□□□□ -0.67
VRK3-213ENST00000597215 DEFB114Q30KQ6 69 aa10.87□□□□□ -0.67
VRK3-213ENST00000597215 Q5BKY6 102 aa10.87□□□□□ -0.67
VRK3-213ENST00000597215 BPIFCQ8NFQ6 507 aa10.87□□□□□ -0.67
VRK3-213ENST00000597215 MLXQ9UH92 298 aa10.87□□□□□ -0.67
VRK3-213ENST00000597215 WDR83OSQ9Y284 106 aa10.87□□□□□ -0.67
VRK3-213ENST00000597215 LSM4Q9Y4Z0 139 aaKnown RBP10.87□□□□□ -0.67
VRK3-213ENST00000597215 FXYD6-FXYD2A0A087WZ82 144 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 A0A1W2PS18 150 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 CHEK1O14757 476 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 HNRNPCP07910 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
VRK3-213ENST00000597215 CRYBB3P26998 211 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 LYZP61626 148 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 RAB31Q13636 194 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 CLINT1Q14677 625 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 USF2Q15853 346 aaPredicted RBP10.86□□□□□ -0.67
VRK3-213ENST00000597215 CD300EQ496F6 205 aaPredicted RBP10.86□□□□□ -0.67
VRK3-213ENST00000597215 ZNF546Q86UE3 836 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 PBDC1Q9BVG4 233 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 RHPN1-AS1Q9BWJ2 59 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 TMEM231Q9H6L2 316 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 RABAC1Q9UI14 185 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
VRK3-213ENST00000597215 SORL1Q92673 2214 aa10.85□□□□□ -0.67
VRK3-213ENST00000597215 IGHV3-49A0A0A0MS15 119 aa10.85□□□□□ -0.67
VRK3-213ENST00000597215 AGPAT2O15120 278 aa10.85□□□□□ -0.67
VRK3-213ENST00000597215 DFFBO76075 338 aa10.85□□□□□ -0.67
VRK3-213ENST00000597215 KRTAP10-11P60412 298 aa10.85□□□□□ -0.67
VRK3-213ENST00000597215 AQP10Q96PS8 301 aa10.85□□□□□ -0.67
VRK3-213ENST00000597215 MGST2Q99735 147 aa10.85□□□□□ -0.67
VRK3-213ENST00000597215 VSIRQ9H7M9 311 aa10.85□□□□□ -0.67
VRK3-213ENST00000597215 PFDN2Q9UHV9 154 aa10.85□□□□□ -0.67
VRK3-213ENST00000597215 ZNF256Q9Y2P7 627 aaPredicted RBP10.85□□□□□ -0.67
VRK3-213ENST00000597215 IGHV3OR16-13A0A075B7E8 117 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 IGHV3-74A0A0B4J1X5 117 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 TRAV25A0A0B4J276 109 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 G3V3Q6 166 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 MPDU1O75352 247 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 CD5P06127 495 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 FGF7P21781 194 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 GATA2P23769 480 aaPredicted RBP10.84□□□□□ -0.67
VRK3-213ENST00000597215 CAMLGP49069 296 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 EIF2B2P49770 351 aaKnown RBP10.84□□□□□ -0.67
VRK3-213ENST00000597215 LAMTOR1Q6IAA8 161 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 TMEM182Q6ZP80 229 aaPredicted RBP10.84□□□□□ -0.67
VRK3-213ENST00000597215 TMEM61Q8N0U2 210 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 INO80EQ8NBZ0 244 aaPredicted RBP10.84□□□□□ -0.67
VRK3-213ENST00000597215 ST8SIA2Q92186 375 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 GRAMD2BQ96HH9 432 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 ATP5SQ99766 215 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 SLC45A2Q9UMX9 530 aa10.84□□□□□ -0.67
VRK3-213ENST00000597215 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 IZUMO1RA6ND01 250 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 APOHP02749 345 aaPredicted RBP10.83□□□□□ -0.68
VRK3-213ENST00000597215 LINC00869P0C866 280 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 GP9P14770 177 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 S100A7P31151 101 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 RBPMS2Q6ZRY4 209 aaKnown RBP10.83□□□□□ -0.68
VRK3-213ENST00000597215 RNF2Q99496 336 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 GGTLC1Q9BX51 225 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 SMIM3Q9BZL3 60 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 TNFSF18Q9UNG2 199 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 SELENOKQ9Y6D0 94 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 U3KQE9 123 aa10.83□□□□□ -0.68
VRK3-213ENST00000597215 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
VRK3-213ENST00000597215 SMLR1H3BR10 107 aa10.82□□□□□ -0.68
VRK3-213ENST00000597215 IFNA5P01569 189 aa10.82□□□□□ -0.68
VRK3-213ENST00000597215 ORM2P19652 201 aa10.82□□□□□ -0.68
VRK3-213ENST00000597215 PLP1P60201 277 aa10.82□□□□□ -0.68
VRK3-213ENST00000597215 OPCMLQ14982 345 aa10.82□□□□□ -0.68
VRK3-213ENST00000597215 PXDC1Q5TGL8 231 aa10.82□□□□□ -0.68
VRK3-213ENST00000597215 OR1B1Q8NGR6 318 aa10.82□□□□□ -0.68
VRK3-213ENST00000597215 PPP1R14BQ96C90 147 aa10.82□□□□□ -0.68
VRK3-213ENST00000597215 WDR61Q9GZS3 305 aaKnown RBP10.82□□□□□ -0.68
VRK3-213ENST00000597215 AURKAIP1Q9NWT8 199 aaPredicted RBP10.82□□□□□ -0.68
VRK3-213ENST00000597215 RNF222A6NCQ9 220 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms