RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 PPP1R14BQ96C90 147 aa7.53□□□□□ -1.2
SHKBP1-210ENST00000595874 SLC35E1Q96K37 410 aa7.53□□□□□ -1.2
SHKBP1-210ENST00000595874 LINC00052Q96N35 136 aa7.53□□□□□ -1.2
SHKBP1-210ENST00000595874 RBM38Q9H0Z9 239 aaKnown RBP7.53□□□□□ -1.2
SHKBP1-210ENST00000595874 IGKV1D-37A0A075B6S9 117 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 HELTA6NFD8 242 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 DEDDO75618 318 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 SFT2D2O95562 160 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 SCGB1D2O95969 90 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 GATA2P23769 480 aaPredicted RBP7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 AP3S2P59780 193 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 GAMTQ14353 236 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 SPANXN5Q5MJ07 72 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 GGNBP1Q5YKI7 109 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 TRIQKQ629K1 86 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 SIGLEC15Q6ZMC9 328 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 CENPSQ8N2Z9 138 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 LINC00476Q8WZB0 136 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 RAB40CQ96S21 281 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 SRRQ9GZT4 340 aa7.52□□□□□ -1.21
SHKBP1-210ENST00000595874 IGHV3OR16-12A0A075B7B8 117 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 IGHV4-28A0A0C4DH34 117 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 SMCO3A2RU48 225 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 NUPR2A6NF83 97 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 GIG44P09565 113 aaPredicted RBP7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 YPEL3P61236 119 aaPredicted RBP7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 TRPT1Q86TN4 253 aaKnown RBP7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 C11orf45Q8TAV5 145 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 DCANP1Q8TF63 244 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 RNF125Q96EQ8 232 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 DOK5Q9P104 306 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 XCL2Q9UBD3 114 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 U3KQ87 197 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 U3KQE9 123 aa7.51□□□□□ -1.21
SHKBP1-210ENST00000595874 BIRC6Q9NR09 4857 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 FAM90A26D6RGX4 464 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 CCNKO75909 580 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 RBMY1A1P0DJD3 496 aaKnown RBP7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 RBMY1CP0DJD4 496 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 ANXA7P20073 488 aaKnown RBP7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 RRAS2P62070 204 aaPredicted RBP7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 POLR2GP62487 172 aaKnown RBP eCLIP7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 RAB11AP62491 216 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 SRPXP78539 464 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 RBMY1FQ15415 496 aaKnown RBP7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 TMEM128Q5BJH2 165 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 SPANXN2Q5MJ10 180 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 GDF5OSQ5U4N7 250 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 TMEM182Q6ZP80 229 aaPredicted RBP7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 NOXA1Q86UR1 476 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 RPP25LQ8N5L8 163 aaKnown RBP7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 GATAD1Q8WUU5 269 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 WDR12Q9GZL7 423 aaKnown RBP7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 SLC25A22Q9H936 323 aa7.5□□□□□ -1.21
SHKBP1-210ENST00000595874 TRAV2A0A0B4J234 112 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 C9orf170A2RU37 121 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 F6UB75 175 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 CCSO14618 274 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 BUB3O43684 328 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 PITX3O75364 302 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 CD5P06127 495 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 EIF2B2P49770 351 aaKnown RBP7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 AKR1C1Q04828 323 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 IGFL4Q6B9Z1 124 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 OR8G2PQ6IF36 304 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 TMEM217Q8N7C4 229 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 SDHCQ99643 169 aaPredicted RBP7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 CELA1Q9UNI1 258 aa7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 KLK5Q9Y337 293 aaPredicted RBP7.49□□□□□ -1.21
SHKBP1-210ENST00000595874 IGKV1OR2-108A0A075B7D4 117 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 ELOA3CA0A087WX78 387 aaPredicted RBP7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 IGLL5B9A064 214 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 SYNGR2O43760 224 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 SSSCA1O60232 199 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 SNRPCP09234 159 aaKnown RBP7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 ORM2P19652 201 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 EMP1P54849 157 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 FGL1Q08830 312 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 C4orf46Q504U0 113 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 Q8NAQ8 132 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 OR4B1Q8NGF8 309 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 OR1B1Q8NGR6 318 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 COQ8AQ8NI60 647 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 SLC25A21Q9BQT8 299 aaPredicted RBP7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 NRN1Q9NPD7 142 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 PSENENQ9NZ42 101 aa7.48□□□□□ -1.21
SHKBP1-210ENST00000595874 DUXBA0A1W2PPF3 345 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 MED6O75586 246 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 OR4E1P0C645 316 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 ZNF705DP0CH99 300 aaPredicted RBP7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 ZNF705BP0CI00 300 aaPredicted RBP7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 BTCP35070 178 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 GPX4P36969 197 aaPredicted RBP7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 SNRPD3P62318 126 aaKnown RBP7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 Q6ZTC4 211 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 ACOT7LQ6ZUV0 252 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 OR8I2Q8N0Y5 310 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 C20orf173Q96LM9 149 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 SCRT1Q9BWW7 348 aa7.47□□□□□ -1.21
SHKBP1-210ENST00000595874 SLC25A32Q9H2D1 315 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms