RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 MAGT1Q9H0U3 335 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 FRAS1Q86XX4 4008 aa13.03□□□□□ -0.32
PNKP-206ENST00000595792 KMT2AQ03164 3969 aa13.02□□□□□ -0.32
PNKP-206ENST00000595792 C9orf170A2RU37 121 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 PRSS46E5RG02 174 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 ADAP1O75689 374 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 IFNA4P05014 189 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 GIG44P09565 113 aaPredicted RBP13.02□□□□□ -0.33
PNKP-206ENST00000595792 RD3LP0DJH9 198 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 NANOS2P60321 138 aaKnown RBP13.02□□□□□ -0.33
PNKP-206ENST00000595792 ZNF90Q03938 601 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 TMEM217Q8N7C4 229 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 OR51G1Q8NGK1 321 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 OR11H2Q8NH07 326 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 TMED3Q9Y3Q3 217 aa13.02□□□□□ -0.33
PNKP-206ENST00000595792 IGKV1OR2-108A0A075B7D4 117 aa13.01□□□□□ -0.33
PNKP-206ENST00000595792 NAP1L6A6NFF2 107 aa13.01□□□□□ -0.33
PNKP-206ENST00000595792 BUB3O43684 328 aa13.01□□□□□ -0.33
PNKP-206ENST00000595792 SCGB2A1O75556 95 aa13.01□□□□□ -0.33
PNKP-206ENST00000595792 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
PNKP-206ENST00000595792 ATF4P18848 351 aaPredicted RBP13.01□□□□□ -0.33
PNKP-206ENST00000595792 GPX4P36969 197 aaPredicted RBP13.01□□□□□ -0.33
PNKP-206ENST00000595792 TRIQKQ629K1 86 aa13.01□□□□□ -0.33
PNKP-206ENST00000595792 GATAD1Q8WUU5 269 aa13.01□□□□□ -0.33
PNKP-206ENST00000595792 KLK5Q9Y337 293 aaPredicted RBP13.01□□□□□ -0.33
PNKP-206ENST00000595792 KNCNA6PVL3 124 aa13□□□□□ -0.33
PNKP-206ENST00000595792 FAM90A26D6RGX4 464 aa13□□□□□ -0.33
PNKP-206ENST00000595792 GSG1LQ6UXU4 331 aa13□□□□□ -0.33
PNKP-206ENST00000595792 RPP25LQ8N5L8 163 aaKnown RBP13□□□□□ -0.33
PNKP-206ENST00000595792 GRAMD2BQ96HH9 432 aa13□□□□□ -0.33
PNKP-206ENST00000595792 FBXL17Q9UF56 701 aa13□□□□□ -0.33
PNKP-206ENST00000595792 CENPXA8MT69 81 aa12.99□□□□□ -0.33
PNKP-206ENST00000595792 WRBO00258 174 aa12.99□□□□□ -0.33
PNKP-206ENST00000595792 PLA2G10O15496 165 aa12.99□□□□□ -0.33
PNKP-206ENST00000595792 SYNGR2O43760 224 aa12.99□□□□□ -0.33
PNKP-206ENST00000595792 DEDDO75618 318 aa12.99□□□□□ -0.33
PNKP-206ENST00000595792 IL7P13232 177 aa12.99□□□□□ -0.33
PNKP-206ENST00000595792 ANXA7P20073 488 aaKnown RBP12.99□□□□□ -0.33
PNKP-206ENST00000595792 ATP5IP56385 69 aaPredicted RBP12.99□□□□□ -0.33
PNKP-206ENST00000595792 UBE2MP61081 183 aaKnown RBP12.99□□□□□ -0.33
PNKP-206ENST00000595792 DHRS2Q13268 280 aa12.99□□□□□ -0.33
PNKP-206ENST00000595792 TRPT1Q86TN4 253 aaKnown RBP12.99□□□□□ -0.33
PNKP-206ENST00000595792 RNF125Q96EQ8 232 aa12.99□□□□□ -0.33
PNKP-206ENST00000595792 NARS2Q96I59 477 aaKnown RBP12.99□□□□□ -0.33
PNKP-206ENST00000595792 OR4E1P0C645 316 aa12.98□□□□□ -0.33
PNKP-206ENST00000595792 CNPY1Q3B7I2 92 aa12.98□□□□□ -0.33
PNKP-206ENST00000595792 STHQ8IWL8 128 aa12.98□□□□□ -0.33
PNKP-206ENST00000595792 SLC35E1Q96K37 410 aa12.98□□□□□ -0.33
PNKP-206ENST00000595792 C7orf50Q9BRJ6 194 aaKnown RBP12.98□□□□□ -0.33
PNKP-206ENST00000595792 C11orf68Q9H3H3 251 aaKnown RBP12.98□□□□□ -0.33
PNKP-206ENST00000595792 ZFP92A6NM28 416 aa12.97□□□□□ -0.33
PNKP-206ENST00000595792 H3BP45 60 aa12.97□□□□□ -0.33
PNKP-206ENST00000595792 C4BPBP20851 252 aa12.97□□□□□ -0.33
PNKP-206ENST00000595792 ID3Q02535 119 aa12.97□□□□□ -0.33
PNKP-206ENST00000595792 OR2F1Q13607 317 aa12.97□□□□□ -0.33
PNKP-206ENST00000595792 TMEM182Q6ZP80 229 aaPredicted RBP12.97□□□□□ -0.33
PNKP-206ENST00000595792 LINC00299Q6ZSB3 139 aa12.97□□□□□ -0.33
PNKP-206ENST00000595792 THAP8Q8NA92 274 aa12.97□□□□□ -0.33
PNKP-206ENST00000595792 C11orf45Q8TAV5 145 aa12.97□□□□□ -0.33
PNKP-206ENST00000595792 PAIP2BQ9ULR5 123 aaKnown RBP12.97□□□□□ -0.33
PNKP-206ENST00000595792 HELTA6NFD8 242 aa12.96□□□□□ -0.33
PNKP-206ENST00000595792 MED6O75586 246 aa12.96□□□□□ -0.33
PNKP-206ENST00000595792 EIF2B2P49770 351 aaKnown RBP12.96□□□□□ -0.33
PNKP-206ENST00000595792 POLR2GP62487 172 aaKnown RBP eCLIP12.96□□□□□ -0.33
PNKP-206ENST00000595792 RAB11AP62491 216 aa12.96□□□□□ -0.33
PNKP-206ENST00000595792 SIGLEC15Q6ZMC9 328 aa12.96□□□□□ -0.33
PNKP-206ENST00000595792 OR4D5Q8NGN0 318 aa12.96□□□□□ -0.33
PNKP-206ENST00000595792 TRGV9Q99603 122 aa12.96□□□□□ -0.33
PNKP-206ENST00000595792 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.33
PNKP-206ENST00000595792 VPS13DQ5THJ4 4388 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 PMS2P5A8MQ11 134 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 CCNKO75909 580 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 DEFB1P60022 68 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 LYZP61626 148 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 ACTL10Q5JWF8 245 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 SPANXN5Q5MJ07 72 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 Q8NAQ8 132 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 RAB40CQ96S21 281 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 DNAH10Q8IVF4 4471 aa12.95□□□□□ -0.34
PNKP-206ENST00000595792 GATA2P23769 480 aaPredicted RBP12.94□□□□□ -0.34
PNKP-206ENST00000595792 PAX9P55771 341 aa12.94□□□□□ -0.34
PNKP-206ENST00000595792 OR8G2PQ6IF36 304 aa12.94□□□□□ -0.34
PNKP-206ENST00000595792 CIB3Q96Q77 187 aaPredicted RBP12.94□□□□□ -0.34
PNKP-206ENST00000595792 WDR12Q9GZL7 423 aaKnown RBP12.94□□□□□ -0.34
PNKP-206ENST00000595792 NRN1Q9NPD7 142 aa12.94□□□□□ -0.34
PNKP-206ENST00000595792 CLEC5AQ9NY25 188 aa12.94□□□□□ -0.34
PNKP-206ENST00000595792 IGHV4-28A0A0C4DH34 117 aa12.93□□□□□ -0.34
PNKP-206ENST00000595792 RBMY1A1P0DJD3 496 aaKnown RBP12.93□□□□□ -0.34
PNKP-206ENST00000595792 RBMY1CP0DJD4 496 aa12.93□□□□□ -0.34
PNKP-206ENST00000595792 AP2S1P53680 142 aaPredicted RBP12.93□□□□□ -0.34
PNKP-206ENST00000595792 RBMY1FQ15415 496 aaKnown RBP12.93□□□□□ -0.34
PNKP-206ENST00000595792 C17orf77Q96MU5 243 aa12.93□□□□□ -0.34
PNKP-206ENST00000595792 MFFQ9GZY8 342 aa12.93□□□□□ -0.34
PNKP-206ENST00000595792 SOCS3O14543 225 aa12.92□□□□□ -0.34
PNKP-206ENST00000595792 GDF5OSQ5U4N7 250 aa12.92□□□□□ -0.34
PNKP-206ENST00000595792 ACOT7LQ6ZUV0 252 aa12.92□□□□□ -0.34
PNKP-206ENST00000595792 CSNK1G2-AS1Q8NCQ2 148 aa12.92□□□□□ -0.34
PNKP-206ENST00000595792 COQ8AQ8NI60 647 aa12.92□□□□□ -0.34
PNKP-206ENST00000595792 SNRPGP15A8MWD9 76 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms