RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 IGHV7-4-1A0A0J9YVY3 117 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 DUXBA0A1W2PPF3 345 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 CLN5O75503 358 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 TMEM50AO95807 157 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 GIG44P09565 113 aaPredicted RBP9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 VAMP1P23763 118 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 INPP1P49441 399 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 PPP1R1AQ13522 171 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 MLANAQ16655 118 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 C12orf74Q32Q52 190 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 C1orf134Q5TEV5 83 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 ZNF600Q6ZNG1 722 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 CENPSQ8N2Z9 138 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 LRTM2Q8N967 370 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 OR4X1Q8NH49 305 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 TMEM170AQ8WVE7 144 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 ZFAND3Q9H8U3 227 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 SMPXQ9UHP9 88 aa9.89□□□□□ -0.83
SHKBP1-208ENST00000595726 PIGBOS1A0A0B4J2F0 54 aa9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 NAP1L6A6NFF2 107 aa9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 CHEK1O14757 476 aa9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 SFT2D2O95562 160 aa9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 NPY1RP25929 384 aa9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 LEMD1Q68G75 181 aa9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 TOMM20LQ6UXN7 152 aa9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 DTD1Q8TEA8 209 aa9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 RHPN1-AS1Q9BWJ2 59 aa9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 PUS1Q9Y606 427 aaKnown RBP eCLIP9.88□□□□□ -0.83
SHKBP1-208ENST00000595726 TRAV14DV4A0A0A6YYC5 116 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 A0A1B0GU03 582 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 RPS10-NUDT3A0A1W2PQS6 291 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 NDUFB6O95139 128 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 IL7P13232 177 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 BTCP35070 178 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 UBE2DNLQ8IWF7 75 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 TMEM116Q8NCL8 245 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 OR1S1Q8NH92 325 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 GINS3Q9BRX5 216 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 RBKSQ9H477 322 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 X6R8D5 127 aa9.87□□□□□ -0.83
SHKBP1-208ENST00000595726 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 LINC00854A0A1B0GVQ3 168 aa9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 PITX3O75364 302 aa9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 IFNA21P01568 189 aa9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 IGKV1-17P01599 117 aa9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 MIFP14174 115 aa9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 CMC4P56277 68 aaPredicted RBP9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 UBE2MP61081 183 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 PRSS54Q6PEW0 395 aa9.86□□□□□ -0.83
SHKBP1-208ENST00000595726 SCGB2A1O75556 95 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 APOHP02749 345 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 IGLC1P0CG04 106 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 SLC25A4P12235 298 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 SLC25A6P12236 298 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 RND2P52198 227 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 DEFB131AP59861 70 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 TIGITQ495A1 244 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 FAM90A2PQ658T7 463 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 NOXA1Q86UR1 476 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 FAM24BQ8N5W8 94 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 ST8SIA2Q92186 375 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 C7orf50Q9BRJ6 194 aaKnown RBP9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 VSIRQ9H7M9 311 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 CLEC5AQ9NY25 188 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 FLVCR2Q9UPI3 526 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 TMED3Q9Y3Q3 217 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 U3KQ87 197 aa9.85□□□□□ -0.83
SHKBP1-208ENST00000595726 TRAV30A0A087WSZ9 112 aa9.84□□□□□ -0.83
SHKBP1-208ENST00000595726 C9orf170A2RU37 121 aa9.84□□□□□ -0.83
SHKBP1-208ENST00000595726 CENPXA8MT69 81 aa9.84□□□□□ -0.83
SHKBP1-208ENST00000595726 ETFRF1Q6IPR1 90 aa9.84□□□□□ -0.83
SHKBP1-208ENST00000595726 OR1S2Q8NGQ3 325 aa9.84□□□□□ -0.83
SHKBP1-208ENST00000595726 ZNF705EA8MWA4 302 aaPredicted RBP9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 FAM90A26D6RGX4 464 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 HOXB5P09067 269 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 OR4E1P0C645 316 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 IAPPP10997 89 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 C4BPBP20851 252 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 OR10J1P30954 320 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 DHRS2Q13268 280 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 GGNBP1Q5YKI7 109 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 TCF24Q7RTU0 167 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 LILRB2Q8N423 598 aa9.83□□□□□ -0.84
SHKBP1-208ENST00000595726 IGHV3-66A0A0C4DH42 116 aa9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 PLA2G10O15496 165 aa9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 ADAP1O75689 374 aa9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 ANXA7P20073 488 aaKnown RBP9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 CRYBB3P26998 211 aa9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 ATP5IP56385 69 aaPredicted RBP9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 YPEL3P61236 119 aaPredicted RBP9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 STHQ8IWL8 128 aa9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 NPIPB3Q92617 1050 aa9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 ACY3Q96HD9 319 aa9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 METTL26Q96S19 204 aa9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 AGRNO00468 2067 aa9.82□□□□□ -0.84
SHKBP1-208ENST00000595726 DFFBO76075 338 aa9.81□□□□□ -0.84
SHKBP1-208ENST00000595726 CD5P06127 495 aa9.81□□□□□ -0.84
SHKBP1-208ENST00000595726 INAFM2P0DMQ5 153 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms