RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TEX45Q8NA69 505 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 TMEM116Q8NCL8 245 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 NDFIP1Q9BT67 221 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
VRK3-209ENST00000594948 COLQQ9Y215 455 aaPredicted RBP10.63□□□□□ -0.71
VRK3-209ENST00000594948 PPIAL4AQ9Y536 164 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 FREM2Q5SZK8 3169 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 FRYLO94915 3013 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 C22orf46C9J442 243 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 TCRAP04437 139 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 CCL3L1P16619 93 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 WT1P19544 449 aaPredicted RBP10.63□□□□□ -0.71
VRK3-209ENST00000594948 CEACAM8P31997 349 aaPredicted RBP10.63□□□□□ -0.71
VRK3-209ENST00000594948 HINT1P49773 126 aaPredicted RBP10.63□□□□□ -0.71
VRK3-209ENST00000594948 MRGPRG-AS1Q2M3A8 158 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 LEMD1Q68G75 181 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 IGF2-ASQ6U949 168 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 IGFL3Q6UXB1 125 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 C17orf100A8MU93 164 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 K7EP13 123 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 TNFRSF13BO14836 293 aaPredicted RBP10.62□□□□□ -0.71
VRK3-209ENST00000594948 C10orf55Q5SWW7 151 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 C16orf54Q6UWD8 224 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 TCF24Q7RTU0 167 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 ASCL5Q7RTU5 278 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 PIP4P1Q86T03 277 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 C8orf46Q8TAG6 207 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 TMEM14CQ9P0S9 112 aa10.62□□□□□ -0.71
VRK3-209ENST00000594948 PPIAL4EA0A075B759 164 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 IGHV1-24A0A0C4DH33 117 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 PPIAL4DF5H284 164 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 SYS1-DBNDD2H3BUS1 97 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 HAX1O00165 279 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 CCL25O15444 150 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 LIPFP07098 398 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 PPIAL4FP0DN26 164 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 LRRC10Q5BKY1 277 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 SPATA12Q7Z6I5 190 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 GATD1Q8NB37 220 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 OR1B1Q8NGR6 318 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 GTSF1Q8WW33 167 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 DAZAP1Q96EP5 407 aaKnown RBP10.61□□□□□ -0.71
VRK3-209ENST00000594948 TMEM191AQ9H0A3 160 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 CADP27708 2225 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 LOC102724200A0A096LPH7 203 aaPredicted RBP10.61□□□□□ -0.71
VRK3-209ENST00000594948 NDUFB3O43676 98 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 HOXB4P17483 251 aaPredicted RBP10.61□□□□□ -0.71
VRK3-209ENST00000594948 ORM2P19652 201 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 FOXA3P55318 350 aaPredicted RBP10.61□□□□□ -0.71
VRK3-209ENST00000594948 DLX6P56179 175 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
VRK3-209ENST00000594948 DEFB109BQ30KR1 87 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 ASPHD1Q5U4P2 390 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 UNQ5815/PRO19632Q6UWF5 114 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 PET117Q6UWS5 81 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 TMEM108Q6UXF1 575 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 LINC00322Q6ZN03 302 aaPredicted RBP10.61□□□□□ -0.71
VRK3-209ENST00000594948 KIR3DL3Q8N743 410 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 MS4A6AQ9H2W1 248 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 Q9H3A6 140 aa10.61□□□□□ -0.71
VRK3-209ENST00000594948 TMEM178BH3BS89 294 aa10.6□□□□□ -0.71
VRK3-209ENST00000594948 SLC25A17O43808 307 aa10.6□□□□□ -0.71
VRK3-209ENST00000594948 FCN3O75636 299 aa10.6□□□□□ -0.71
VRK3-209ENST00000594948 LEPROTL1O95214 131 aa10.6□□□□□ -0.71
VRK3-209ENST00000594948 HLA-DRB1P01911 266 aa10.6□□□□□ -0.71
VRK3-209ENST00000594948 RPL27AP46776 148 aaKnown RBP10.6□□□□□ -0.71
VRK3-209ENST00000594948 Q86TA4 180 aa10.6□□□□□ -0.71
VRK3-209ENST00000594948 TNFRSF14Q92956 283 aa10.6□□□□□ -0.71
VRK3-209ENST00000594948 CLEC5AQ9NY25 188 aa10.6□□□□□ -0.71
VRK3-209ENST00000594948 IGHV2-70DA0A0C4DH43 119 aa10.59□□□□□ -0.71
VRK3-209ENST00000594948 PLAUP00749 431 aa10.59□□□□□ -0.71
VRK3-209ENST00000594948 CRYGBP07316 175 aa10.59□□□□□ -0.71
VRK3-209ENST00000594948 PGLYRP4Q96LB8 373 aa10.59□□□□□ -0.71
VRK3-209ENST00000594948 KAAG1Q9UBP8 84 aa10.59□□□□□ -0.71
VRK3-209ENST00000594948 TRAV30A0A087WSZ9 112 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 A0A1B0GW15 77 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 CHEK1O14757 476 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 APOHP02749 345 aaPredicted RBP10.58□□□□□ -0.72
VRK3-209ENST00000594948 CCL8P80075 99 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 DIAPH2-AS1Q14236 149 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 ADIPOQQ15848 244 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 TMEM155Q4W5P6 130 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 FBLN7Q53RD9 439 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 Q6ZS92 163 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 RPRMLQ8N4K4 120 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 HSPB8Q9UJY1 196 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 HIGD1AQ9Y241 93 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 NAV3Q8IVL0 2385 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 URB1O60287 2271 aaKnown RBP10.58□□□□□ -0.72
VRK3-209ENST00000594948 HSBP1L1C9JCN9 74 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 IGHV3-48P01763 117 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 FAM27E3Q08E93 113 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 SLC25A34Q6PIV7 304 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 H1FXQ92522 213 aaKnown RBP10.58□□□□□ -0.72
VRK3-209ENST00000594948 MAP1LC3CQ9BXW4 147 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 TPSG1Q9NRR2 321 aa10.58□□□□□ -0.72
VRK3-209ENST00000594948 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms