RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 INTS1Q8N201 2190 aaKnown RBP10.16□□□□□ -0.78
LIG1-207ENST00000594759 C2orf70A6NJV1 201 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 HOXA3O43365 443 aaPredicted RBP10.15□□□□□ -0.78
LIG1-207ENST00000594759 PYYP10082 97 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 FCGR2BP31994 310 aaPredicted RBP10.15□□□□□ -0.78
LIG1-207ENST00000594759 INO80CQ6PI98 192 aaPredicted RBP10.15□□□□□ -0.78
LIG1-207ENST00000594759 FADS6Q8N9I5 356 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 SSC4DQ8WTU2 575 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 HS3ST6Q96QI5 342 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 FOXC2Q99958 501 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 MAP1LC3AQ9H492 121 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 PRR19A6NJB7 356 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 CRYGSP22914 178 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 ZNF718Q3SXZ3 478 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 ASPHD1Q5U4P2 390 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 CCDC144NLQ6NUI1 221 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 TEX45Q8NA69 505 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 AAMDCQ9H7C9 122 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 IDI2-AS1Q9NZ38 188 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 IGHV3-48P01763 117 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 FXYD7P58549 80 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 LYZP61626 148 aa10.15□□□□□ -0.78
LIG1-207ENST00000594759 KLF13Q9Y2Y9 288 aaPredicted RBP10.15□□□□□ -0.78
LIG1-207ENST00000594759 A8MWV9 139 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 H7C2G1 150 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 ORMDL3Q8N138 153 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 PPIFP30405 207 aaKnown RBP10.14□□□□□ -0.79
LIG1-207ENST00000594759 KLF5Q13887 457 aaPredicted RBP10.14□□□□□ -0.79
LIG1-207ENST00000594759 RPRMLQ8N4K4 120 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 DEFB108BQ8NET1 73 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 ZNF502Q8TBZ5 544 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 FAM168AQ92567 244 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 NDFIP1Q9BT67 221 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 GAGE12JA6NER3 117 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 K7ERJ3 54 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 GAGE7O76087 117 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 GAGE12FP0CL80 117 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 GAGE12GP0CL81 117 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 GAGE12IP0CL82 117 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 GAGE4Q13068 117 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 HES1Q14469 280 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 TCTEX1D4Q5JR98 221 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 TMEM42Q69YG0 159 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 Q8N976 141 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 REPIN1Q9BWE0 567 aaKnown RBP10.14□□□□□ -0.79
LIG1-207ENST00000594759 K7ESF4 209 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 GOLT1AQ6ZVE7 132 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 NABP1Q96AH0 204 aa10.14□□□□□ -0.79
LIG1-207ENST00000594759 CHD7Q9P2D1 2997 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 EML5Q05BV3 1969 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 TMEM189A5PLL7 270 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 LIFP15018 202 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 EPDR1Q9UM22 224 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 PRTN3P24158 256 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 NPIPB3Q92617 1050 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 DLX4Q92988 240 aaPredicted RBP10.13□□□□□ -0.79
LIG1-207ENST00000594759 SRXN1Q9BYN0 137 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 CADP27708 2225 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 NUP210Q8TEM1 1887 aaPredicted RBP10.13□□□□□ -0.79
LIG1-207ENST00000594759 LINC00305Q7Z4B0 112 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 PPP1R32Q7Z5V6 425 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 GTSCR1Q86UQ5 136 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 WNK2Q9Y3S1 2297 aa10.13□□□□□ -0.79
LIG1-207ENST00000594759 RBP4P02753 201 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 C8orf86Q6ZUL3 223 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 OR1L8Q8NGR8 309 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 LRRC29Q8WV35 223 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 COQ2Q96H96 371 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 DLL1O00548 723 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 ORM1P02763 201 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 MAGEA5P43359 124 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 OR5AN1Q8NGI8 311 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 FGFBP3Q8TAT2 258 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 ZNF146Q15072 292 aa10.12□□□□□ -0.79
LIG1-207ENST00000594759 MBNL2Q5VZF2 373 aaKnown RBP10.12□□□□□ -0.79
LIG1-207ENST00000594759 A0A1W2PRD5 423 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 A0A1W2PRM7 423 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 KLK10O43240 276 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 ZNF497Q6ZNH5 498 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 MOSP00540 346 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 LINC00205P59089 165 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 RSPO1Q2MKA7 263 aaPredicted RBP10.11□□□□□ -0.79
LIG1-207ENST00000594759 RPL39P5Q59GN2 51 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 ZNF826PQ6ZT77 177 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 OR9G1Q8NH87 305 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 RNF183Q96D59 192 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 SIVA1O15304 175 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 MEOX1P50221 254 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 TUSC5Q8IXB3 177 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 MED12LQ86YW9 2145 aa10.11□□□□□ -0.79
LIG1-207ENST00000594759 TRGV5A0A0B4J1U4 118 aa10.1□□□□□ -0.79
LIG1-207ENST00000594759 GGTLC3B5MD39 225 aa10.1□□□□□ -0.79
LIG1-207ENST00000594759 DPM2O94777 84 aa10.1□□□□□ -0.79
LIG1-207ENST00000594759 IGKCP01834 107 aa10.1□□□□□ -0.79
LIG1-207ENST00000594759 HOXA4Q00056 320 aaPredicted RBP10.1□□□□□ -0.79
LIG1-207ENST00000594759 ATP1A1-AS1Q5TC04 95 aa10.1□□□□□ -0.79
LIG1-207ENST00000594759 LCNL1Q6ZST4 164 aa10.1□□□□□ -0.79
LIG1-207ENST00000594759 ZNF441Q8N8Z8 693 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms