RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 SELENOTP62341 195 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 OPCMLQ14982 345 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 ZNF709Q8N972 641 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 HSD17B11Q8NBQ5 300 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 OR4F17Q8NGA8 305 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 DUX3Q96PT4 197 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 OR4F4Q96R69 305 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 CYTL1Q9NRR1 136 aa8.33□□□□□ -1.08
USE1-204ENST00000594399 NDUFA4O00483 81 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 CFDP00746 253 aaPredicted RBP8.32□□□□□ -1.08
USE1-204ENST00000594399 PF4P02776 101 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 LINC00869P0C866 280 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 PSG1P11464 419 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 TPT1P13693 172 aaKnown RBP8.32□□□□□ -1.08
USE1-204ENST00000594399 MYCNOSP40205 109 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 SLURP1P55000 103 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 EIF5AP63241 154 aaKnown RBP8.32□□□□□ -1.08
USE1-204ENST00000594399 C1QL4Q86Z23 238 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 BPIFCQ8NFQ6 507 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 OR51G1Q8NGK1 321 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 Q8WTZ3 238 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 GNPNAT1Q96EK6 184 aaPredicted RBP8.32□□□□□ -1.08
USE1-204ENST00000594399 ZNF414Q96IQ9 312 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 RSG1Q9BU20 258 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 SLC45A2Q9UMX9 530 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 TIMM9Q9Y5J7 89 aa8.32□□□□□ -1.08
USE1-204ENST00000594399 PUS1Q9Y606 427 aaKnown RBP eCLIP8.32□□□□□ -1.08
USE1-204ENST00000594399 M0QZ24 198 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 YIF1AO95070 293 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 IL4P05112 153 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 ATP6V0CP27449 155 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 RPL29P47914 159 aaKnown RBP8.31□□□□□ -1.08
USE1-204ENST00000594399 LYZP61626 148 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 B2MP61769 119 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 FAM106AQ4KMX7 169 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 TOMM20LQ6UXN7 152 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 REC114Q7Z4M0 266 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 SLC51BQ86UW2 128 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 GPHB5Q86YW7 130 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 STPG3Q8N7X2 389 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 STOML3Q8TAV4 291 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 TMEM190Q8WZ59 177 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 RCC1LQ96I51 464 aaKnown RBP8.31□□□□□ -1.08
USE1-204ENST00000594399 GINS3Q9BRX5 216 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 C20orf24Q9BUV8 137 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 PXMP4Q9Y6I8 212 aa8.31□□□□□ -1.08
USE1-204ENST00000594399 WI2-2373I1.2A0A1W2PRP0 233 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 A8MWP6 167 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 LGALS9O00182 355 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 TSPAN15O95858 294 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 GATA2P23769 480 aaPredicted RBP8.3□□□□□ -1.08
USE1-204ENST00000594399 SYNJ2BPP57105 145 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 PRR20EP86478 221 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 PRR20CP86479 221 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 PRR20DP86480 221 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 PRR20BP86481 221 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 PRR20AP86496 221 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 KLF5Q13887 457 aaPredicted RBP8.3□□□□□ -1.08
USE1-204ENST00000594399 MIC13Q5XKP0 118 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 UNQ9165/PRO28630Q6UXU0 137 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 TMEM182Q6ZP80 229 aaPredicted RBP8.3□□□□□ -1.08
USE1-204ENST00000594399 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 PSMG3Q9BT73 122 aaPredicted RBP8.3□□□□□ -1.08
USE1-204ENST00000594399 PBDC1Q9BVG4 233 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 SH3BGRL3Q9H299 93 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 ARV1Q9H2C2 271 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 SLC39A9Q9NUM3 307 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 UFC1Q9Y3C8 167 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 BOLA1Q9Y3E2 137 aa8.3□□□□□ -1.08
USE1-204ENST00000594399 IGHV3OR16-8A0A075B7F1 116 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 ZNF320A2RRD8 509 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 ELLP55199 621 aaPredicted RBP8.29□□□□□ -1.08
USE1-204ENST00000594399 PLP1P60201 277 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 USF2Q15853 346 aaPredicted RBP8.29□□□□□ -1.08
USE1-204ENST00000594399 FFAR4Q5NUL3 377 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 PXDC1Q5TGL8 231 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 Q6ZRG5 221 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 BAP18Q8IXM2 172 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 OR1B1Q8NGR6 318 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 OR2G3Q8NGZ4 309 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 ST8SIA2Q92186 375 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 DLX4Q92988 240 aaPredicted RBP8.29□□□□□ -1.08
USE1-204ENST00000594399 METTL26Q96S19 204 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 SLC25A32Q9H2D1 315 aa8.29□□□□□ -1.08
USE1-204ENST00000594399 DAZ1Q9NQZ3 744 aaKnown RBP8.29□□□□□ -1.08
USE1-204ENST00000594399 OVOL1O14753 267 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 COX7A2P2O60397 106 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 SPP1P10451 314 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 ORM2P19652 201 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 SERF2P84101 59 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 EIF5AL1Q6IS14 154 aaKnown RBP8.28□□□□□ -1.08
USE1-204ENST00000594399 LINC00482Q8N8I6 264 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 OR1L4Q8NGR5 311 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 PFDN5Q99471 154 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 DOK5Q9P104 306 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 PEMTQ9UBM1 199 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 RABAC1Q9UI14 185 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 RFNGQ9Y644 331 aa8.28□□□□□ -1.08
USE1-204ENST00000594399 PKD1L1Q8TDX9 2849 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms