RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 CLDN34H7C241 214 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 CXorf1O96002 111 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 STAG3L2P0CL84 134 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 STAG3L3P0CL85 134 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 EGR2P11161 476 aaPredicted RBP10.41□□□□□ -0.74
VRK3-205ENST00000593919 IER3P46695 156 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 RPL29P47914 159 aaKnown RBP10.41□□□□□ -0.74
VRK3-205ENST00000593919 RPL23P62829 140 aaKnown RBP10.41□□□□□ -0.74
VRK3-205ENST00000593919 CD69Q07108 199 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 PVRIGQ6DKI7 326 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 RNASEH2CQ8TDP1 164 aaKnown RBP10.41□□□□□ -0.74
VRK3-205ENST00000593919 FNDC4Q9H6D8 234 aaPredicted RBP10.41□□□□□ -0.74
VRK3-205ENST00000593919 DMRT1Q9Y5R6 373 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 HIVEP2P31629 2446 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 LINC00587B1AMM8 73 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 FNDC10F2Z333 226 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 ATP6V0E1O15342 81 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 NPPCP23582 126 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 RHOBP62745 196 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 C16orf82Q7Z2V1 217 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 OR51G1Q8NGK1 321 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 MISP3Q96FF7 219 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 WNT10AQ9GZT5 417 aa10.41□□□□□ -0.74
VRK3-205ENST00000593919 SEPSECSQ9HD40 501 aaKnown RBP10.41□□□□□ -0.74
VRK3-205ENST00000593919 ANK3Q12955 4377 aaKnown RBP10.41□□□□□ -0.74
VRK3-205ENST00000593919 SETXQ7Z333 2677 aaKnown RBP10.4□□□□□ -0.74
VRK3-205ENST00000593919 C5orf52A6NGY3 159 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 LINC01548A6NM66 108 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 GAMTQ14353 236 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 Q6YL49 198 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 SLC16A13Q7RTY0 426 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 TMEM144Q7Z5S9 345 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 C1QL4Q86Z23 238 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 TEX29Q8N6K0 151 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 OR5T1Q8NG75 326 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 SGMS2Q8NHU3 365 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 HIVEP1P15822 2718 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 NF1P21359 2839 aa10.4□□□□□ -0.74
VRK3-205ENST00000593919 IGKV1OR2-108A0A075B7D4 117 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 NPIPB5A8MRT5 1133 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 M0QZK8 103 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 PDE6DO43924 150 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 IGHV3-48P01763 117 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 CRYGCP07315 174 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 LINC00869P0C866 280 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 OR10J1P30954 320 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 RND2P52198 227 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 PRR20EP86478 221 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 PRR20CP86479 221 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 PRR20DP86480 221 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 PRR20BP86481 221 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 PRR20AP86496 221 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 FAM209BQ5JX69 171 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 REC114Q7Z4M0 266 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 NECAP1Q8NC96 275 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 CACNG8Q8WXS5 425 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 CTDSP1Q9GZU7 261 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 YAE1D1Q9NRH1 226 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 TMEM242Q9NWH2 141 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 SLC45A2Q9UMX9 530 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 NDUFS6O75380 124 aaKnown RBP10.39□□□□□ -0.75
VRK3-205ENST00000593919 GATA2P23769 480 aaPredicted RBP10.39□□□□□ -0.75
VRK3-205ENST00000593919 GCHFRP30047 84 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 GPX4P36969 197 aaPredicted RBP10.39□□□□□ -0.75
VRK3-205ENST00000593919 SUMO1P63165 101 aaKnown RBP10.39□□□□□ -0.75
VRK3-205ENST00000593919 FABP9Q0Z7S8 132 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 ECSCRQ19T08 205 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 TTC9CQ8N5M4 171 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 OR5R1Q8NH85 324 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 PRDM13Q9H4Q3 707 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 TNFRSF19Q9NS68 423 aa10.39□□□□□ -0.75
VRK3-205ENST00000593919 CORTO00230 105 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 NDUFB4O95168 129 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 C9orf152Q5JTZ5 239 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 FAM78BQ5VT40 261 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 MIR17HGQ75NE6 70 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 ACY3Q96HD9 319 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 SLC35E1Q96K37 410 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 FAM210BQ96KR6 192 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 SMR3AQ99954 134 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 DERL1Q9BUN8 251 aa10.38□□□□□ -0.75
VRK3-205ENST00000593919 YTHDF2Q9Y5A9 579 aaKnown RBP10.38□□□□□ -0.75
VRK3-205ENST00000593919 IGHV3-21A0A0B4J1V1 117 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 F6UZH7 168 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 UBE2CO00762 179 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 HOXA3O43365 443 aaPredicted RBP10.37□□□□□ -0.75
VRK3-205ENST00000593919 SRP14P37108 136 aaKnown RBP10.37□□□□□ -0.75
VRK3-205ENST00000593919 BLCAPP62952 87 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 UNQ5815/PRO19632Q6UWF5 114 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 MRPL36Q9P0J6 103 aaKnown RBP10.37□□□□□ -0.75
VRK3-205ENST00000593919 VPREB3Q9UKI3 123 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 SCO2A0A1W2PP80 73 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 G3V318 75 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 H7BYZ3 331 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 AP4M1O00189 453 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 MT-CO2P00403 227 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 OR1L6Q8NGR2 347 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 FANCD2OSQ96PS1 177 aa10.37□□□□□ -0.75
VRK3-205ENST00000593919 AURKAIP1Q9NWT8 199 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms