RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 ATOH7Q8N100 152 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 OR8B3Q8NGG8 313 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 OR4A5Q8NH83 315 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 FLYWCH2Q96CP2 140 aaKnown RBP8.75□□□□□ -1.01
VPS4B-206ENST00000591475 FXYD5Q96DB9 178 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 OR8B2Q96RD0 313 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 ALKBH7Q9BT30 221 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-206ENST00000591475 PPIAL4AQ9Y536 164 aa8.75□□□□□ -1.01
VPS4B-206ENST00000591475 NBASA2RRP1 2371 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 TRAV9-2A0A087WT02 112 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 NKX6-3A6NJ46 265 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 TCF21O43680 179 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 NDUFB8O95169 186 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 TSPOP30536 169 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 UBE2G1P62253 170 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 FAM27E3Q08E93 113 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 TEX36Q5VZQ5 186 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 RNASEKQ6P5S7 137 aaKnown RBP8.74□□□□□ -1.01
VPS4B-206ENST00000591475 THAP8Q8NA92 274 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 VSTM2AQ8TAG5 236 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 TMEM167AQ8TBQ9 72 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 ORAOV1Q8WV07 137 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 NPIPB3Q92617 1050 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 TNFRSF19Q9NS68 423 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 COL6A6A6NMZ7 2263 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 ADGRG4Q8IZF6 3080 aa8.74□□□□□ -1.01
VPS4B-206ENST00000591475 HIGD1CA8MV81 97 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 C16orf97H3BN30 126 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 CAMPP49913 170 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 MEF2CQ06413 473 aaPredicted RBP8.73□□□□□ -1.01
VPS4B-206ENST00000591475 FAM162BQ5T6X4 162 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 SSX8Q7RTT4 187 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 PDPNQ86YL7 162 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 STXBP6Q8NFX7 210 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 OR5AN1Q8NGI8 311 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 SMIM12Q96EX1 92 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 FNDC4Q9H6D8 234 aaPredicted RBP8.73□□□□□ -1.01
VPS4B-206ENST00000591475 C7orf69Q9H7B7 122 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 IGKV1D-37A0A075B6S9 117 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 IGHV2-26A0A0B4J1V2 119 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 E7EUB6 86 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 FSTL3O95633 263 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 SLC25A5P05141 298 aaKnown RBP8.73□□□□□ -1.01
VPS4B-206ENST00000591475 MYCNOSP40205 109 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 GPR6P46095 362 aaPredicted RBP8.73□□□□□ -1.01
VPS4B-206ENST00000591475 WT1-ASQ06250 92 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 MAJINQ3KP22 176 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 Q56UQ5 140 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 EBLN2Q6P2I7 272 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 LINC00305Q7Z4B0 112 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 PERPQ96FX8 193 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 SSBP4Q9BWG4 385 aaPredicted RBP8.73□□□□□ -1.01
VPS4B-206ENST00000591475 EPDR1Q9UM22 224 aa8.73□□□□□ -1.01
VPS4B-206ENST00000591475 ZFYVE26Q68DK2 2539 aa8.72□□□□□ -1.01
VPS4B-206ENST00000591475 A0A1B0GXF2 115 aa8.72□□□□□ -1.01
VPS4B-206ENST00000591475 CORTO00230 105 aa8.72□□□□□ -1.01
VPS4B-206ENST00000591475 HINT1P49773 126 aaPredicted RBP8.72□□□□□ -1.01
VPS4B-206ENST00000591475 GNG5P63218 68 aa8.72□□□□□ -1.01
VPS4B-206ENST00000591475 OR4C13Q8NGP0 309 aa8.72□□□□□ -1.01
VPS4B-206ENST00000591475 C2orf70A6NJV1 201 aa8.71□□□□□ -1.01
VPS4B-206ENST00000591475 CGB1A6NKQ9 187 aa8.71□□□□□ -1.01
VPS4B-206ENST00000591475 REG1BP48304 166 aa8.71□□□□□ -1.01
VPS4B-206ENST00000591475 HBBP68871 147 aa8.71□□□□□ -1.01
VPS4B-206ENST00000591475 ZNF841Q6ZN19 808 aa8.71□□□□□ -1.01
VPS4B-206ENST00000591475 KLF12Q9Y4X4 402 aa8.71□□□□□ -1.01
VPS4B-206ENST00000591475 PGPA6NDG6 321 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 IGHV3-48P01763 117 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 CCL3L1P16619 93 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 ADORA2A-AS1P86434 159 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 FBXL19-AS1Q494R0 122 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 C10orf55Q5SWW7 151 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 FAM71F2Q6NXP2 309 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 ZCCHC24Q8N2G6 241 aaKnown RBP8.71□□□□□ -1.02
VPS4B-206ENST00000591475 OR2D3Q8NGH3 330 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 OR10X1Q8NGY0 326 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 ZNF596Q8TC21 504 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 BLNKQ8WV28 456 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 GPR82Q96P67 336 aa8.71□□□□□ -1.02
VPS4B-206ENST00000591475 RPP21Q9H633 154 aaKnown RBP8.71□□□□□ -1.02
VPS4B-206ENST00000591475 SOX21Q9Y651 276 aaPredicted RBP8.71□□□□□ -1.02
VPS4B-206ENST00000591475 A8MWL6 223 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 VWC2LB2RUY7 222 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 PLAUP00749 431 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 IGLL1P15814 213 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 GNLYP22749 145 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 PTTG1IPP53801 180 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 CT83Q5H943 113 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 ETFRF1Q6IPR1 90 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 FMC1Q96HJ9 113 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 BBC3Q96PG8 261 aaPredicted RBP8.7□□□□□ -1.02
VPS4B-206ENST00000591475 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 MRPL36Q9P0J6 103 aaKnown RBP8.7□□□□□ -1.02
VPS4B-206ENST00000591475 WASHC3Q9Y3C0 194 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 PCNX1Q96RV3 2341 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 IGHV1-69-2A0A0G2JMI3 117 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 MOSP00540 346 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 IGLV2-23P01705 113 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 TNFRSF1AP19438 455 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 ORM2P19652 201 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 VMA21Q3ZAQ7 101 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms