RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 MED14OSP0DP75 135 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 PSG1P11464 419 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 NUTF2P61970 127 aaKnown RBP8.38□□□□□ -1.07
CLIP3-204ENST00000590559 SNRPD3P62318 126 aaKnown RBP8.38□□□□□ -1.07
CLIP3-204ENST00000590559 MEF2DQ14814 521 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 LGALS9BQ3B8N2 356 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 GPR107Q5VW38 600 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 FAAP20Q6NZ36 180 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 ZNF709Q8N972 641 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 C15orf40Q8WUR7 153 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 AP3S1Q92572 193 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 NDUFAF3Q9BU61 184 aa8.38□□□□□ -1.07
CLIP3-204ENST00000590559 IGKV1D-37A0A075B6S9 117 aa8.37□□□□□ -1.07
CLIP3-204ENST00000590559 SMIM9A6NGZ8 99 aa8.37□□□□□ -1.07
CLIP3-204ENST00000590559 SOCS3O14543 225 aa8.37□□□□□ -1.07
CLIP3-204ENST00000590559 GSTZ1O43708 216 aaPredicted RBP8.37□□□□□ -1.07
CLIP3-204ENST00000590559 RD3LP0DJH9 198 aa8.37□□□□□ -1.07
CLIP3-204ENST00000590559 NPY1RP25929 384 aa8.37□□□□□ -1.07
CLIP3-204ENST00000590559 TMEM268Q5VZI3 342 aa8.37□□□□□ -1.07
CLIP3-204ENST00000590559 ETFRF1Q6IPR1 90 aa8.37□□□□□ -1.07
CLIP3-204ENST00000590559 Q6ZR54 194 aa8.37□□□□□ -1.07
CLIP3-204ENST00000590559 RNASE11Q8TAA1 199 aaKnown RBP8.37□□□□□ -1.07
CLIP3-204ENST00000590559 IL22RA2Q969J5 263 aa8.37□□□□□ -1.07
CLIP3-204ENST00000590559 WDR12Q9GZL7 423 aaKnown RBP8.37□□□□□ -1.07
CLIP3-204ENST00000590559 SAV1Q9H4B6 383 aaPredicted RBP8.37□□□□□ -1.07
CLIP3-204ENST00000590559 PRSS29PA6NIE9 313 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 CEBPZOSA8MTT3 80 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 SMIM18P0DKX4 95 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 DEFB1P60022 68 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 MRPS10P82664 201 aaKnown RBP8.36□□□□□ -1.07
CLIP3-204ENST00000590559 ZNF79Q15937 498 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 CENPSQ8N2Z9 138 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 OR51G1Q8NGK1 321 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 OR4C16Q8NGL9 310 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 SMIM4Q8WVI0 70 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 RNF125Q96EQ8 232 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 DKK2Q9UBU2 259 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 HSPB7Q9UBY9 170 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 CACFD1Q9UGQ2 172 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 C14orf166Q9Y224 244 aaKnown RBP8.36□□□□□ -1.07
CLIP3-204ENST00000590559 U3KQ87 197 aa8.36□□□□□ -1.07
CLIP3-204ENST00000590559 TMEM189A5PLL7 270 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 CTDSP2O14595 271 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 CTDSPLO15194 276 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 SPART-AS1P0CW21 52 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 SULT1A3P0DMM9 295 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 SULT1A4P0DMN0 295 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
CLIP3-204ENST00000590559 OXA1LQ15070 435 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 OR8G2PQ6IF36 304 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 FOXI2Q6ZQN5 318 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 NOXA1Q86UR1 476 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 ACY3Q96HD9 319 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 FAM210BQ96KR6 192 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 C17orf77Q96MU5 243 aa8.35□□□□□ -1.07
CLIP3-204ENST00000590559 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
CLIP3-204ENST00000590559 A8MTW9 85 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 DISC1C4P0D8 188 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 M0R2N4 97 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 AKAIN1P0CW23 69 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 GPX4P36969 197 aaPredicted RBP8.34□□□□□ -1.07
CLIP3-204ENST00000590559 PSMB3P49720 205 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 PAX9P55771 341 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 ZNF90Q03938 601 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 GAMTQ14353 236 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 C1orf194Q5T5A4 169 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 C1orf158Q8N1D5 194 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 RBKSQ9H477 322 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 PRR13Q9NZ81 148 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 RFNGQ9Y644 331 aa8.34□□□□□ -1.07
CLIP3-204ENST00000590559 IGKV1OR2-108A0A075B7D4 117 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 A0A0B4J2A0 478 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 ANKRD20A5PA0PJZ0 165 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 NUP62P37198 522 aaPredicted RBP8.33□□□□□ -1.08
CLIP3-204ENST00000590559 CCR6P51684 374 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 ATP5IP56385 69 aaPredicted RBP8.33□□□□□ -1.08
CLIP3-204ENST00000590559 FXYD7P58549 80 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 KLF9Q13886 244 aaPredicted RBP8.33□□□□□ -1.08
CLIP3-204ENST00000590559 SPATA31B1PQ5VZV4 182 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 LYZL2Q7Z4W2 148 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 LGI3Q8N145 548 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 OR51S1Q8NGJ8 323 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 DTD1Q8TEA8 209 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 PRRT1Q99946 306 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 SLC35B3Q9H1N7 401 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 SHPKQ9UHJ6 478 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 DNAH5Q8TE73 4624 aa8.33□□□□□ -1.08
CLIP3-204ENST00000590559 TEX48A0A1B0GUV7 120 aa8.32□□□□□ -1.08
CLIP3-204ENST00000590559 PITX3O75364 302 aa8.32□□□□□ -1.08
CLIP3-204ENST00000590559 IFNA10P01566 189 aa8.32□□□□□ -1.08
CLIP3-204ENST00000590559 SMCO1Q147U7 214 aa8.32□□□□□ -1.08
CLIP3-204ENST00000590559 SPCS2Q15005 226 aa8.32□□□□□ -1.08
CLIP3-204ENST00000590559 RNF212Q495C1 297 aa8.32□□□□□ -1.08
CLIP3-204ENST00000590559 FAM222AQ5U5X8 452 aa8.32□□□□□ -1.08
CLIP3-204ENST00000590559 NIPSNAP3BQ9BS92 247 aa8.32□□□□□ -1.08
CLIP3-204ENST00000590559 PLA2G2EQ9NZK7 142 aa8.32□□□□□ -1.08
CLIP3-204ENST00000590559 A0A0J9YX75 114 aa8.31□□□□□ -1.08
CLIP3-204ENST00000590559 PRSS46E5RG02 174 aa8.31□□□□□ -1.08
CLIP3-204ENST00000590559 ISLRO14498 428 aa8.31□□□□□ -1.08
CLIP3-204ENST00000590559 IGKV3-20P01619 116 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms