RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 SMR3AQ99954 134 aa8.5□□□□□ -1.05
ZNF540-208ENST00000589857 SLC25A2Q9BXI2 301 aa8.5□□□□□ -1.05
ZNF540-208ENST00000589857 ZNF355PQ9NSJ1 428 aa8.5□□□□□ -1.05
ZNF540-208ENST00000589857 TRBV20OR9-2A0A075B6H5 130 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 TRAV30A0A087WSZ9 112 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 LY6LH3BQJ8 138 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 CNIH1O95406 144 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 LY6G6DO95868 133 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 GCGP01275 180 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 SOD3P08294 240 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 FABP4P15090 132 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 RPL15P61313 204 aaKnown RBP8.49□□□□□ -1.05
ZNF540-208ENST00000589857 SUMO1P63165 101 aaKnown RBP8.49□□□□□ -1.05
ZNF540-208ENST00000589857 C10orf55Q5SWW7 151 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 MINOS1Q5TGZ0 78 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 C11orf71Q6IPW1 123 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 OR5R1Q8NH85 324 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 FAM167A-AS1Q96KT0 104 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 GPR61Q9BZJ8 451 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 FNDC4Q9H6D8 234 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-208ENST00000589857 HIGD1AQ9Y241 93 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 MINOS1-NBL1R4GNA1 71 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 ACANP16112 2415 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 DYSFO75923 2080 aa8.49□□□□□ -1.05
ZNF540-208ENST00000589857 IGKV1D-37A0A075B6S9 117 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 IGHV3-72A0A0B4J1Y9 119 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 GGTLC3B5MD39 225 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 PEX7O00628 323 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 NBR2O15453 112 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 SIAH2O43255 324 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 MOSP00540 346 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 GATA2P23769 480 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-208ENST00000589857 UBE2G1P62253 170 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 Q5PR19 223 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 RASL11AQ6T310 242 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 FAM231DQ6ZW35 169 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 LINC00305Q7Z4B0 112 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 NPBQ8NG41 125 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 SRSF12Q8WXF0 261 aaKnown RBP8.48□□□□□ -1.05
ZNF540-208ENST00000589857 ZNF503Q96F45 646 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 MDFIQ99750 246 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 HIST1H2BLQ99880 126 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 GNB1LQ9BYB4 327 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 GSN-AS1Q9NRJ2 163 aa8.48□□□□□ -1.05
ZNF540-208ENST00000589857 RAI1Q7Z5J4 1906 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-208ENST00000589857 HEATR1Q9H583 2144 aaKnown RBP8.47□□□□□ -1.05
ZNF540-208ENST00000589857 IFITM10A6NMD0 228 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 ODF3BA8MYP8 253 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 TEX22C9J3V5 150 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 E7EUB6 86 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 LYNX1G3V0Z9 82 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 TIMM23O14925 209 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 LYNX1P0DP58 116 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 HIST1H1BP16401 226 aaKnown RBP8.47□□□□□ -1.05
ZNF540-208ENST00000589857 LGALS4P56470 323 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 MMDQ15546 238 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 MLANAQ16655 118 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 MRGPRG-AS1Q2M3A8 158 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 IBA57Q5T440 356 aaKnown RBP8.47□□□□□ -1.05
ZNF540-208ENST00000589857 HCP5Q6MZN7 132 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 PRIMA1Q86XR5 153 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 OR1B1Q8NGR6 318 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 IGF2BP2-AS1Q96M15 143 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 RASL11BQ9BPW5 248 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 TMEM14CQ9P0S9 112 aa8.47□□□□□ -1.05
ZNF540-208ENST00000589857 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
ZNF540-208ENST00000589857 TANC2Q9HCD6 1990 aa8.46□□□□□ -1.05
ZNF540-208ENST00000589857 C22orf46C9J442 243 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 TSTD3H0UI37 97 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 K7EN84 100 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 NDUFA3O95167 84 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 HLA-DQA1P01909 254 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 HIST1H1EP10412 219 aaKnown RBP8.46□□□□□ -1.06
ZNF540-208ENST00000589857 MGST1P10620 155 aaKnown RBP8.46□□□□□ -1.06
ZNF540-208ENST00000589857 ORM2P19652 201 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 RANP62826 216 aaKnown RBP8.46□□□□□ -1.06
ZNF540-208ENST00000589857 PAFAH1B2P68402 229 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 JOSD1Q15040 202 aaPredicted RBP8.46□□□□□ -1.06
ZNF540-208ENST00000589857 PYY3Q5JQD4 70 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 ZNF329Q86UD4 541 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 C5orf17Q8NAS9 161 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 FXYD5Q96DB9 178 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 FMC1Q96HJ9 113 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 Q96MF0 132 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 TMEM68Q96MH6 324 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 CCL19Q99731 98 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 FBXL15Q9H469 300 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 AURKAIP1Q9NWT8 199 aaPredicted RBP8.46□□□□□ -1.06
ZNF540-208ENST00000589857 C1RLQ9NZP8 487 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 THYN1Q9P016 225 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 TBL2Q9Y4P3 447 aaKnown RBP8.46□□□□□ -1.06
ZNF540-208ENST00000589857 V9GYV3 84 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 DNHD1Q96M86 4753 aa8.46□□□□□ -1.06
ZNF540-208ENST00000589857 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.06
ZNF540-208ENST00000589857 ZNF469Q96JG9 3925 aaPredicted RBP8.46□□□□□ -1.06
ZNF540-208ENST00000589857 USF3Q68DE3 2245 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 PGPEP1LA6NFU8 196 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 NPIPB5A8MRT5 1133 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 SMAD7O15105 426 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms