RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 RCC1LQ96I51 464 aaKnown RBP10.4□□□□□ -0.74
VMP1-210ENST00000589823 DAZ1Q9NQZ3 744 aaKnown RBP10.4□□□□□ -0.74
VMP1-210ENST00000589823 LSM4Q9Y4Z0 139 aaKnown RBP10.4□□□□□ -0.74
VMP1-210ENST00000589823 IGHV3OR16-8A0A075B7F1 116 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 A8MWP6 167 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 SEC14L6B5MCN3 397 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 K7EMT4 169 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 AGPAT2O15120 278 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 CAMLGP49069 296 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 ZNF266Q14584 549 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 ZFP69Q49AA0 526 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 SCGB1C1Q8TD33 95 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 MGST2Q99735 147 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 NEURL2Q9BR09 285 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 PBDC1Q9BVG4 233 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 WDR61Q9GZS3 305 aaKnown RBP10.39□□□□□ -0.75
VMP1-210ENST00000589823 ZFAND3Q9H8U3 227 aa10.39□□□□□ -0.75
VMP1-210ENST00000589823 CMYA5Q8N3K9 4069 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 WNK1Q9H4A3 2382 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 A0A0D9SG52 128 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 WI2-2373I1.2A0A1W2PRP0 233 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 C2orf70A6NJV1 201 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 TAAR5O14804 337 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 ZNF207O43670 478 aaKnown RBP10.38□□□□□ -0.75
VMP1-210ENST00000589823 SAP30O75446 220 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 NPPCP23582 126 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 GATA2P23769 480 aaPredicted RBP10.38□□□□□ -0.75
VMP1-210ENST00000589823 LYZP61626 148 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 ZNF345Q14585 488 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 TM4SF20Q53R12 229 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 C9orf66Q5T8R8 295 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 ZNF709Q8N972 641 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 MARC2Q969Z3 335 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 RNF125Q96EQ8 232 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 NARS2Q96I59 477 aaKnown RBP10.38□□□□□ -0.75
VMP1-210ENST00000589823 ZNF414Q96IQ9 312 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 HYLS1Q96M11 299 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 METTL26Q96S19 204 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 GPR61Q9BZJ8 451 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 WFDC1Q9HC57 220 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 SLC45A2Q9UMX9 530 aa10.38□□□□□ -0.75
VMP1-210ENST00000589823 BORCS7-ASMTA0A0B4J1R7 106 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 TMEM213A2RRL7 107 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 C17orf112F2Z3M2 114 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 PFDN1O60925 122 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 CSN3P07498 182 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 LINC00869P0C866 280 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 IGLL1P15814 213 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 BMI1P35226 326 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 EIF2B2P49770 351 aaKnown RBP10.37□□□□□ -0.75
VMP1-210ENST00000589823 CD300CQ08708 224 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 KCNRGQ8N5I3 272 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 DYNLRB2Q8TF09 96 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 NPCDR1Q9BY65 106 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 PARD6GQ9BYG4 376 aaPredicted RBP10.37□□□□□ -0.75
VMP1-210ENST00000589823 KCNIP2Q9NS61 270 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 SIGLEC8Q9NYZ4 499 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 MRPL27Q9P0M9 148 aaKnown RBP10.37□□□□□ -0.75
VMP1-210ENST00000589823 PFDN2Q9UHV9 154 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 RABAC1Q9UI14 185 aa10.37□□□□□ -0.75
VMP1-210ENST00000589823 IGHV7-4-1A0A0J9YVY3 117 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 HNRNPCP07910 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
VMP1-210ENST00000589823 FOLR2P14207 255 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 ORM2P19652 201 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 CBLN1P23435 193 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 S100A7P31151 101 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 RPL29P47914 159 aaKnown RBP10.36□□□□□ -0.75
VMP1-210ENST00000589823 INSL3P51460 131 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 OPCMLQ14982 345 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 USF2Q15853 346 aaPredicted RBP10.36□□□□□ -0.75
VMP1-210ENST00000589823 IL34Q6ZMJ4 242 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 TMEM182Q6ZP80 229 aaPredicted RBP10.36□□□□□ -0.75
VMP1-210ENST00000589823 Q6ZRG5 221 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 OR1B1Q8NGR6 318 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 ARL6Q9H0F7 186 aa10.36□□□□□ -0.75
VMP1-210ENST00000589823 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 JTBO76095 146 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 CXCL2P19875 107 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 CRYBB3P26998 211 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 B2MP61769 119 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 PXDC1Q5TGL8 231 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 MIC13Q5XKP0 118 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 S100A7AQ86SG5 101 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 STPG3Q8N7X2 389 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 PPP1R14BQ96C90 147 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 TMEM231Q9H6L2 316 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 SMPXQ9UHP9 88 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 PXMP4Q9Y6I8 212 aa10.35□□□□□ -0.75
VMP1-210ENST00000589823 IGHV3-49A0A0A0MS15 119 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 A0A1W2PS18 150 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 HYPMO75409 117 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 OR5G3P0C626 314 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 C8orf88P0DMB2 117 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 EDN2P20800 178 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 PLP1P60201 277 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 PRR20EP86478 221 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 PRR20CP86479 221 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 PRR20DP86480 221 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms